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Kun Qu, Ph.D.

Affiliations: 
2010 Chemistry Indiana University, Bloomington, Bloomington, IN, United States 
Area:
systems biology, physical chemistry
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"Kun Qu"
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Peter J. Ortoleva grad student 2010 Indiana University
 (Transcriptional and splicing regulatory networks: Applications in cancer and stem cell differentiation.)

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Publications

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Li B, Li Y, Li K, et al. (2020) APEC: an accesson-based method for single-cell chromatin accessibility analysis. Genome Biology. 21: 116
Xie H, Zhang W, Zhang M, et al. (2020) Chromatin accessibility analysis reveals regulatory dynamics of developing human retina and hiPSC-derived retinal organoids. Science Advances. 6: eaay5247
Du P, Cai P, Huang B, et al. (2020) SMAtool reveals sequences and structural principles of protein-RNA interaction. Biochemical and Biophysical Research Communications
Fang J, Ma Q, Chu C, et al. (2019) PIRCh-seq: functional classification of non-coding RNAs associated with distinct histone modifications. Genome Biology. 20: 292
Cai P, Otten AB, Cheng B, et al. (2019) A genome-wide long noncoding RNA CRISPRi screen identifies as a novel regulator of epidermal homeostasis. Genome Research
Sun H, Liu L, Huang Q, et al. (2019) Accumulation of tumor-infiltrating CD49a+ NK cells correlates with poor prognosis for human hepatocellular carcinoma. Cancer Immunology Research
Ang CE, Ma Q, Wapinski OL, et al. (2019) The novel lncRNA is pro-neurogenic and mutated in human neurodevelopmental disorders. Elife. 8
Otten A, Cai P, Cheng B, et al. (2019) 194 A CRISPR-interference screen identifies PRANCR and other novel long non-coding RNAs controlling human epidermis formation Journal of Investigative Dermatology. 139
Otten A, Cai P, Cheng B, et al. (2019) 332 A noncoding RNA CRISPR-interference screen identifies novel regulators and pathways of human epidermis formation Journal of Investigative Dermatology. 139
Bao X, Siprashvili Z, Zarnegar BJ, et al. (2017) CSNK1a1 Regulates PRMT1 to Maintain the Progenitor State in Self-Renewing Somatic Tissue. Developmental Cell
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