Pavel A. Brodskiy
Affiliations: | 2013- | Chemical and Biomolecular Engineering | University of Notre Dame, Notre Dame, IN, United States |
Area:
Computational BiologyWebsite:
https://engineering.nd.edu/profiles/pbrodskiy/@@download/resumeGoogle:
"Pavel Brodskiy"Bio:
Seven years of research experience in quantitative biology.
Expertise in all aspects of data analysis including:
1) Statistically-driven experimental design
2) Data collection and cleaning
3) Image analysis and feature extraction
4) Feature selection, model selection, and calibration
5) Statistical interpretation of results and visualization
Working on thesis titled: multi-scale high-content analysis for mechanism prediction and drug design
Mean distance: (not calculated yet)
Parents
Sign in to add mentor| Donald Sakaguchi | research assistant | 2010-2013 | Iowa State |
| Jeremiah James Zartman | grad student | 2013-2018 | Notre Dame (Chemistry Tree) |
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Publications
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| Kumar N, Huizar FJ, Farfán-Pira KJ, et al. (2022) MAPPER: An Open-Source, High-Dimensional Image Analysis Pipeline Unmasks Differential Regulation of Wing Features. Frontiers in Genetics. 13: 869719 |
| Brodskiy PA, Wu Q, Soundarrajan DK, et al. (2019) Decoding Calcium Signaling Dynamics during Drosophila Wing Disc Development. Biophysical Journal |
| Liang P, Chen J, Brodskiy PA, et al. (2018) A NEW REGISTRATION APPROACH FOR DYNAMIC ANALYSIS OF CALCIUM SIGNALS IN ORGANS. Proceedings. Ieee International Symposium On Biomedical Imaging. 2018: 934-937 |
| Brodskiy PA, Zartman JJ. (2018) Calcium as a signal integrator in developing epithelial tissues. Physical Biology. 15: 051001 |
| Brodskiy PA, Wu Q, Kumar NK, et al. (2018) Mapping the calcium signalsome during Drosophila wing development Ifac-Papersonline. 51: 108-109 |
| Nematbakhsh A, Sun W, Brodskiy PA, et al. (2017) Multi-scale computational study of the mechanical regulation of cell mitotic rounding in epithelia. Plos Computational Biology. 13: e1005533 |
| Narciso C, Cowdrick KR, Zellmer V, et al. (2016) On-chip three-dimensional tissue histology for microbiopsies Biomicrofluidics. 10 |
| Nematbakhsh A, Brodskiy P, Xu Z, et al. (2016) Multi-scale Computational Model of Epithelial Cell Proliferation and Mechanics Biophysical Journal. 110: 307a |
| Kursawe J, Brodskiy PA, Zartman JJ, et al. (2015) Capabilities and Limitations of Tissue Size Control through Passive Mechanical Forces. Plos Computational Biology. 11: e1004679 |
| Narciso C, Wu Q, Brodskiy P, et al. (2015) Patterning of wound-induced intercellular Ca(2+) flashes in a developing epithelium. Physical Biology. 12: 056005 |