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Steven Salzberg

Affiliations: 
Computer Science Johns Hopkins University, Baltimore, MD 
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"Steven Salzberg"
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Parents

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Barbara J. Grosz grad student (Computer Science Tree)
 (Barbara Grosz was a Ph.D. thesis committee member for Steven Salzberg)
William Woods grad student 1989 Harvard

Children

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Sreerama K. Murthy grad student 1995 Johns Hopkins
John W. Sheppard grad student 1997 Johns Hopkins
Mihaela Pertea grad student 2001 Johns Hopkins
Jonathan Allen grad student 2006 Johns Hopkins
Adam Phillippy grad student 2010 University of Maryland
Michael Schatz grad student 2010 University of Maryland
Cole Trapnell grad student 2010 University of Maryland
Samuel Angiuoli grad student 2011 University of Maryland
David Kelley grad student 2011 University of Maryland
Ben Langmead grad student 2012 University of Maryland
Daehwan Kim grad student 2013 University of Maryland
Derrick Wood grad student 2014 University of Maryland
Martin Steinegger post-doc 2018- Johns Hopkins
Natalia Volfovsky post-doc 1999-2002 The Institute for Genomic Research
Carlton Kingsford post-doc 2005-2007 University of Maryland
Arthur Brady post-doc 2008-2011 University of Maryland
Todd Treangen post-doc 2010-2012 University of Maryland
Tanja Magoc post-doc 2010-2013 Johns Hopkins (Computer Science Tree)
Stefan Canzar post-doc 2012-2014 Johns Hopkins
Daehwan Kim post-doc 2013-2017 Johns Hopkins
Ruibang Laurent Luo post-doc 2016-2017 Johns Hopkins
Florian Breitwieser post-doc 2015-2019 Johns Hopkins
Maria Ermolaeva research scientist 1999-2004 The Institute for Genomic Research
Pawel Gajer research scientist 2000-2004 The Institute for Genomic Research
Mihai Pop research scientist 2005 The Institute for Genomic Research (Computer Science Tree)
Bill Majoros research scientist 2002-2005 The Institute for Genomic Research

Collaborators

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Kenneth Howard Fasman collaborator Johns Hopkins
BETA: Related publications

Publications

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Neale DB, Zimin AV, Meltzer A, et al. (2023) A Genome Sequence for the Threatened Whitebark Pine. Biorxiv : the Preprint Server For Biology
Varabyou A, Sommer MJ, Erdogdu B, et al. (2023) CHESS 3: an improved, comprehensive catalog of human genes and transcripts based on large-scale expression data, phylogenetic analysis, and protein structure. Genome Biology. 24: 249
Gihawi A, Ge Y, Lu J, et al. (2023) Major data analysis errors invalidate cancer microbiome findings. Mbio. e0160723
Amaral P, Carbonell-Sala S, De La Vega FM, et al. (2023) The status of the human gene catalogue. Nature. 622: 41-47
Rhie A, Nurk S, Cechova M, et al. (2023) The complete sequence of a human Y chromosome. Nature
Gihawi A, Ge Y, Lu J, et al. (2023) Major data analysis errors invalidate cancer microbiome findings. Biorxiv : the Preprint Server For Biology
Chao KH, Mao A, Salzberg SL, et al. (2023) Splam: a deep-learning-based splice site predictor that improves spliced alignments. Biorxiv : the Preprint Server For Biology
Erdogdu B, Varabyou A, Hicks SC, et al. (2023) Detecting differential transcript usage in complex diseases with SPIT. Biorxiv : the Preprint Server For Biology
Guo A, Salzberg SL, Zimin AV. (2023) JASPER: A fast genome polishing tool that improves accuracy of genome assemblies. Plos Computational Biology. 19: e1011032
Amaral P, Carbonell-Sala S, Vega FM, et al. (2023) The status of the human gene catalogue. Arxiv
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