Tao Liu
Affiliations: | Department of Biochemistry | State University of New York, Buffalo, Buffalo, NY, United States | |
| Oncology | Roswell Park Comprehensive Cancer Center |
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Publications
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| Niu S, Li J, Bo W, et al. (2021) The Chinese pine genome and methylome unveil key features of conifer evolution. Cell |
| Wang C, Sun D, Huang X, et al. (2020) Integrative analyses of single-cell transcriptome and regulome using MAESTRO. Genome Biology. 21: 198 |
| Tarbell ED, Liu T. (2019) HMMRATAC: a Hidden Markov ModeleR for ATAC-seq. Nucleic Acids Research |
| Zhang P, He D, Xu Y, et al. (2017) Genome-wide identification and differential analysis of translational initiation. Nature Communications. 8: 1749 |
| Mei S, Qin Q, Wu Q, et al. (2016) Cistrome Data Browser: a data portal for ChIP-Seq and chromatin accessibility data in human and mouse. Nucleic Acids Research |
| Qin Q, Mei S, Wu Q, et al. (2016) ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline. Bmc Bioinformatics. 17: 404 |
| Ho JW, Jung YL, Liu T, et al. (2014) Comparative analysis of metazoan chromatin organization. Nature. 512: 449-52 |
| Meijer DH, Sun Y, Liu T, et al. (2014) An amino terminal phosphorylation motif regulates intranuclear compartmentalization of Olig2 in neural progenitor cells. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 34: 8507-18 |
| Liu T. (2014) Use model-based Analysis of ChIP-Seq (MACS) to analyze short reads generated by sequencing protein-DNA interactions in embryonic stem cells. Methods in Molecular Biology (Clifton, N.J.). 1150: 81-95 |
| Shin H, Liu T, Duan X, et al. (2013) Computational methodology for ChIP-seq analysis. Quantitative Biology. 1: 54-70 |