Stefan Canzar
Affiliations: | 2012-2014 | Institute of Genetic Medicine | Johns Hopkins University, Baltimore, MD |
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Publications
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| Do VH, Elbassioni K, Canzar S. (2020) Sphetcher: Spherical Thresholding Improves Sketching of Single-Cell Transcriptomic Heterogeneity. Iscience. 23: 101126 |
| Chakraborty S, Canzar S, Marschall T, et al. (2020) Chromatyping: Reconstructing Nucleosome Profiles from NOMe Sequencing Data. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 27: 330-341 |
| Andreotti S, Canzar S. (2019) Guided Reconstruction of Full-Length Isoforms from Short Reads by CIDANE. Methods in Molecular Biology (Clifton, N.J.). 1870: 199-208 |
| Gonzales NM, Seo J, Hernandez Cordero AI, et al. (2018) Genome wide association analysis in a mouse advanced intercross line. Nature Communications. 9: 5162 |
| Sulakhe D, D'Souza M, Wang S, et al. (2018) Exploring the functional impact of alternative splicing on human protein isoforms using available annotation sources. Briefings in Bioinformatics |
| Kuang Z, Canzar S. (2018) Tracking Alternatively Spliced Isoforms from Long Reads by SpliceHunter. Methods in Molecular Biology (Clifton, N.J.). 1751: 73-88 |
| Canzar S, Salzberg SL. (2017) Short Read Mapping: An Algorithmic Tour. Proceedings of the Ieee. Institute of Electrical and Electronics Engineers. 105: 436-458 |
| Canzar S, Neu KE, Tang Q, et al. (2017) BASIC: BCR assembly from single cells. Bioinformatics (Oxford, England). 33: 425-427 |
| Kuang Z, Boeke JD, Canzar S. (2016) The dynamic landscape of fission yeast meiosis alternative-splice isoforms. Genome Research |
| Canzar S, Andreotti S, Weese D, et al. (2016) CIDANE: comprehensive isoform discovery and abundance estimation. Genome Biology. 17: 16 |