Panagiotis Koukos
Affiliations: | 2016-2020 | Utrecht University, Utrecht, Netherlands |
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Parents
Sign in to add mentor| Alexandre MJJ Bonvin | grad student | 2016-2020 | Utrecht | |
| (post-doc 2020-2021) | ||||
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Publications
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| van der Krift F, Zijlmans DW, Shukla R, et al. (2023) A novel antifolate suppresses growth of FPGS-deficient cells and overcomes methotrexate resistance. Life Science Alliance. 6 |
| Lensink MF, Brysbaert G, Mauri T, et al. (2021) Prediction of protein assemblies, the next frontier: The CASP14-CAPRI experiment. Proteins |
| Koukos PI, Réau M, Bonvin AMJJ. (2021) Shape-Restrained Modeling of Protein-Small-Molecule Complexes with High Ambiguity Driven DOCKing. Journal of Chemical Information and Modeling |
| Honorato RV, Koukos PI, Jiménez-García B, et al. (2021) Structural Biology in the Clouds: The WeNMR-EOSC Ecosystem. Frontiers in Molecular Biosciences. 8: 729513 |
| Matos-Filipe P, Preto AJ, Koukos PI, et al. (2021) MENSAdb: a thorough structural analysis of membrane protein dimers. Database : the Journal of Biological Databases and Curation. 2021 |
| Koukos PI, Roel-Touris J, Ambrosetti F, et al. (2019) An overview of data-driven HADDOCK strategies in CAPRI rounds 38-45. Proteins |
| Basciu A, Koukos PI, Malloci G, et al. (2019) Coupling enhanced sampling of the apo-receptor with template-based ligand conformers selection: performance in pose prediction in the D3R Grand Challenge 4. Journal of Computer-Aided Molecular Design |
| Lensink MF, Brysbaert G, Nadzirin N, et al. (2019) Blind prediction of homo- and hetero- protein complexes: The CASP13-CAPRI experiment. Proteins |
| Jiménez-García B, Elez K, Koukos PI, et al. (2019) PRODIGY-crystal: a web-tool for classification of biological interfaces in protein complexes. Bioinformatics (Oxford, England) |
| Vangone A, Schaarschmidt J, Koukos P, et al. (2019) Large-scale prediction of binding affinity in protein-small ligand complexes: the PRODIGY-LIG web server. Bioinformatics (Oxford, England). 35: 1585-1587 |