Mark Achtman
Affiliations: | University of Warwick, Coventry, England, United Kingdom |
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| Zhou Z, Charlesworth J, Achtman M. (2023) HierCC: a multi-level clustering scheme for population assignments based on core genome MLST. Bioinformatics (Oxford, England). 37: 3645-3646 |
| Achtman M, Zhou Z, Charlesworth J, et al. (2022) EnteroBase: hierarchical clustering of 100 000s of bacterial genomes into species/subspecies and populations. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 377: 20210240 |
| Holt KE, Aanensen DM, Achtman M. (2022) Genomic population structures of microbial pathogens. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 377: 20210230 |
| Achtman M, Van den Broeck F, Cooper KK, et al. (2021) Genomic population structure associated with repeated escape of Salmonella enterica ATCC14028s from the laboratory into nature. Plos Genetics. 17: e1009820 |
| Moodley Y, Brunelli A, Ghirotto S, et al. (2021) 's historical journey through Siberia and the Americas. Proceedings of the National Academy of Sciences of the United States of America. 118 |
| Achtman M, Zhou Z, Alikhan NF, et al. (2020) Genomic diversity of The UoWUCC 10K genomes project. Wellcome Open Research. 5: 223 |
| Achtman M, Wain J, Weill FX, et al. (2020) Correction: Multilocus Sequence Typing as a Replacement for Serotyping in Salmonella enterica. Plos Pathogens. 16: e1009040 |
| Zhou Z, Charlesworth J, Achtman M. (2020) Accurate reconstruction of bacterial pan- and core genomes with PEPPAN. Genome Research. 30: 1667-1679 |
| Achtman M, Zhou Z. (2020) Metagenomics of the modern and historical human oral microbiome with phylogenetic studies on and . Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 375: 20190573 |
| Frentrup M, Zhou Z, Steglich M, et al. (2020) A publicly accessible database for genome sequences supports tracing of transmission chains and epidemics. Microbial Genomics |