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Shivkumar Venkatasubrahmanyam, Ph.D. - Publications

Affiliations: 
2007 Biochemistry and Molecular Biology University of California, San Francisco, San Francisco, CA 
Area:
Molecular Biology, Genetics, Bioinformatics Biology
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4/13 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2007 Venkatasubrahmanyam S, Hwang WW, Meneghini MD, Tong AH, Madhani HD. Genome-wide, as opposed to local, antisilencing is mediated redundantly by the euchromatic factors Set1 and H2A.Z. Proceedings of the National Academy of Sciences of the United States of America. 104: 16609-14. PMID 17925448 DOI: 10.1073/Pnas.0700914104  0.557
2004 Kobor MS, Venkatasubrahmanyam S, Meneghini MD, Gin JW, Jennings JL, Link AJ, Madhani HD, Rine J. A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin. Plos Biology. 2: E131. PMID 15045029 DOI: 10.1371/Journal.Pbio.0020131  0.568
2003 Hwang WW, Venkatasubrahmanyam S, Ianculescu AG, Tong A, Boone C, Madhani HD. A conserved RING finger protein required for histone H2B monoubiquitination and cell size control. Molecular Cell. 11: 261-6. PMID 12535538 DOI: 10.1016/S1097-2765(02)00826-2  0.566
2002 Harris BZ, Venkatasubrahmanyam S, Lim WA. Coordinated folding and association of the LIN-2, -7 (L27) domain. An obligate heterodimerization involved in assembly of signaling and cell polarity complexes. The Journal of Biological Chemistry. 277: 34902-8. PMID 12110687 DOI: 10.1074/Jbc.M205856200  0.322
Low-probability matches (unlikely to be authored by this person)
2009 Mani M, Venkatasubrahmanyam S, Sanyal M, Levy S, Butte A, Weinberg K, Jahn T. Wiskott-Aldrich syndrome protein is an effector of Kit signaling. Blood. 114: 2900-8. PMID 19643989 DOI: 10.1182/Blood-2009-01-200733  0.208
2008 Viatour P, Somervaille TC, Venkatasubrahmanyam S, Kogan S, McLaughlin ME, Weissman IL, Butte AJ, Passegué E, Sage J. Hematopoietic stem cell quiescence is maintained by compound contributions of the retinoblastoma gene family. Cell Stem Cell. 3: 416-28. PMID 18940733 DOI: 10.1016/J.Stem.2008.07.009  0.193
2008 Chen R, Mallelwar R, Thosar A, Venkatasubrahmanyam S, Butte AJ. GeneChaser: identifying all biological and clinical conditions in which genes of interest are differentially expressed. Bmc Bioinformatics. 9: 548. PMID 19094235 DOI: 10.1186/1471-2105-9-548  0.171
2009 Wilson KD, Venkatasubrahmanyam S, Jia F, Sun N, Butte AJ, Wu JC. MicroRNA profiling of human-induced pluripotent stem cells. Stem Cells and Development. 18: 749-58. PMID 19284351 DOI: 10.1089/Scd.2008.0247  0.155
2019 Blauwkamp TA, Thair S, Rosen MJ, Blair L, Lindner MS, Vilfan ID, Kawli T, Christians FC, Venkatasubrahmanyam S, Wall GD, Cheung A, Rogers ZN, Meshulam-Simon G, Huijse L, Balakrishnan S, et al. Analytical and clinical validation of a microbial cell-free DNA sequencing test for infectious disease. Nature Microbiology. PMID 30742071 DOI: 10.1038/S41564-018-0349-6  0.115
2023 Park SY, Chang EJ, Ledeboer N, Messacar K, Lindner MS, Venkatasubrahmanyam S, Wilber JC, Vaughn ML, Bercovici S, Perkins BA, Nolte FS. Plasma Microbial Cell-Free DNA Sequencing from over 15,000 Patients Identified a Broad Spectrum of Pathogens. Journal of Clinical Microbiology. e0185522. PMID 37439686 DOI: 10.1128/jcm.01855-22  0.114
2019 Kondo M, Dalai SC, Venkatasubrahmanyam S, Eisenberg N, Robinson BD, Westblade LF, Marks KM. Diagnosis and Genotyping of Endocarditis in a Patient with Prosthetic Pulmonary Valve Replacement Using Next-Generation Sequencing of Plasma Microbial Cell-Free DNA. Open Forum Infectious Diseases. 6: ofz242. PMID 31249846 DOI: 10.1093/ofid/ofz242  0.073
2010 Mold JE, Venkatasubrahmanyam S, Burt TD, Michaëlsson J, Rivera JM, Galkina SA, Weinberg K, Stoddart CA, McCune JM. Fetal and adult hematopoietic stem cells give rise to distinct T cell lineages in humans. Science (New York, N.Y.). 330: 1695-9. PMID 21164017 DOI: 10.1126/Science.1196509  0.067
2010 Wilson KD, Hu S, Venkatasubrahmanyam S, Fu JD, Sun N, Abilez OJ, Baugh JJ, Jia F, Ghosh Z, Li RA, Butte AJ, Wu JC. Dynamic microRNA expression programs during cardiac differentiation of human embryonic stem cells: role for miR-499. Circulation. Cardiovascular Genetics. 3: 426-35. PMID 20733065 DOI: 10.1161/Circgenetics.109.934281  0.067
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