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Yingxi Lin - Publications

Affiliations: 
Massachusetts Institute of Technology, Cambridge, MA, United States 
Area:
Synapse Development
Website:
http://web.mit.edu/bcs/people/lin.shtml
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28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Stackmann M, Yelhekar TD, Meng M, Sun X, Nthumba J, Bulthuis NE, Vaughan N, Zhu E, Lin Y, Denny CA. A multiple (mArc) tagging system to uncover the organizational principles of multiple memories. Biorxiv : the Preprint Server For Biology. PMID 38352478 DOI: 10.1101/2024.02.01.578410  0.745
2024 Xue J, Brawner AT, Thompson JR, Yelhekar TD, Newmaster KT, Qiu Q, Cooper YA, Yu CR, Ahmed-Braima YH, Kim Y, Lin Y. Spatiotemporal Mapping and Molecular Basis of Whole-brain Circuit Maturation. Biorxiv : the Preprint Server For Biology. PMID 38260331 DOI: 10.1101/2024.01.03.572456  0.76
2022 Ren LY, Cicvaric A, Zhang H, Meyer MAA, Guedea AL, Gao P, Petrovic Z, Sun X, Lin Y, Radulovic J. Nuclear exclusion of the repressor REST in the dentate gyrus after stress. Molecular Psychiatry. 27: 3557. PMID 36447007 DOI: 10.1038/s41380-022-01869-0  0.527
2022 Yang J, Serrano P, Yin X, Sun X, Lin Y, Chen SX. Functionally distinct NPAS4-expressing somatostatin interneuron ensembles critical for motor skill learning. Neuron. PMID 36099920 DOI: 10.1016/j.neuron.2022.08.018  0.588
2022 Ren LY, Cicvaric A, Zhang H, Aa Meyer M, Guedea AL, Gao P, Petrovic Z, Sun X, Lin Y, Radulovic J. Correction: Stress-induced changes of the cholinergic circuitry promote retrieval-based generalization of aversive memories. Molecular Psychiatry. PMID 35681082 DOI: 10.1038/s41380-022-01650-3  0.576
2022 Ren LY, Cicvaric A, Zhang H, Meyer MMAA, Guedea AL, Gao P, Petrovic Z, Sun X, Lin Y, Radulovic J. Stress-induced changes of the cholinergic circuitry promote retrieval-based generalization of aversive memories. Molecular Psychiatry. PMID 35551246 DOI: 10.1038/s41380-022-01610-x  0.629
2020 Sun X, Bernstein MJ, Meng M, Rao S, Sørensen AT, Yao L, Zhang X, Anikeeva PO, Lin Y. Functionally Distinct Neuronal Ensembles within the Memory Engram. Cell. PMID 32187527 DOI: 10.1016/J.Cell.2020.02.055  0.758
2018 Weng FJ, Garcia RI, Lutzu S, Alviña K, Zhang Y, Dushko M, Ku T, Zemoura K, Rich D, Garcia-Dominguez D, Hung M, Yelhekar TD, Sørensen AT, Xu W, Chung K, ... ... Lin Y, et al. Npas4 Is a Critical Regulator of Learning-Induced Plasticity at Mossy Fiber-CA3 Synapses during Contextual Memory Formation. Neuron. PMID 29429933 DOI: 10.1016/J.Neuron.2018.01.026  0.781
2017 Taniguchi M, Carreira MB, Cooper YA, Bobadilla AC, Heinsbroek JA, Koike N, Larson EB, Balmuth EA, Hughes BW, Penrod RD, Kumar J, Smith LN, Guzman D, Takahashi JS, Kim TK, ... ... Lin Y, et al. HDAC5 and Its Target Gene, Npas4, Function in the Nucleus Accumbens to Regulate Cocaine-Conditioned Behaviors. Neuron. 96: 130-144.e6. PMID 28957664 DOI: 10.1016/J.Neuron.2017.09.015  0.689
2017 Crittenden JR, Lacey CJ, Weng FJ, Garrison CE, Gibson DJ, Lin Y, Graybiel AM. Striatal Cholinergic Interneurons Modulate Spike-Timing in Striosomes and Matrix by an Amphetamine-Sensitive Mechanism. Frontiers in Neuroanatomy. 11: 20. PMID 28377698 DOI: 10.3389/Fnana.2017.00020  0.382
2016 Sørensen AT, Cooper YA, Baratta MV, Weng FJ, Zhang Y, Ramamoorthi K, Fropf R, LaVerriere E, Xue J, Young A, Schneider C, Gøtzsche CR, Hemberg M, Yin JC, Maier SF, ... Lin Y, et al. A robust activity marking system for exploring active neuronal ensembles. Elife. 5. PMID 27661450 DOI: 10.7554/Elife.13918  0.705
2016 Sun X, Lin Y. Npas4: Linking Neuronal Activity to Memory. Trends in Neurosciences. PMID 26987258 DOI: 10.1016/J.Tins.2016.02.003  0.686
2016 Sørensen AT, Cooper YA, Baratta MV, Weng F, Zhang Y, Ramamoorthi K, Fropf R, LaVerriere E, Xue J, Young A, Schneider C, Gøtzsche CR, Hemberg M, Yin JC, Maier SF, ... Lin Y, et al. Author response: A robust activity marking system for exploring active neuronal ensembles Elife. DOI: 10.7554/Elife.13918.028  0.396
2014 Chuong AS, Miri ML, Busskamp V, Matthews GA, Acker LC, Sørensen AT, Young A, Klapoetke NC, Henninger MA, Kodandaramaiah SB, Ogawa M, Ramanlal SB, Bandler RC, Allen BD, Forest CR, ... ... Lin Y, et al. Noninvasive optical inhibition with a red-shifted microbial rhodopsin. Nature Neuroscience. 17: 1123-9. PMID 24997763 DOI: 10.1038/Nn.3752  0.344
2013 Sim S, Antolin S, Lin CW, Lin Y, Lin YX, Lois C. Increased cell-intrinsic excitability induces synaptic changes in new neurons in the adult dentate gyrus that require Npas4. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 7928-40. PMID 23637184 DOI: 10.1523/Jneurosci.1571-12.2013  0.491
2013 Leong WK, Klaric TS, Lin Y, Lewis MD, Koblar SA. Upregulation of the neuronal Per-Arnt-Sim domain protein 4 (Npas4) in the rat corticolimbic system following focal cerebral ischemia. The European Journal of Neuroscience. 37: 1875-84. PMID 23431968 DOI: 10.1111/Ejn.12163  0.388
2012 Ross SE, McCord AE, Jung C, Atan D, Mok SI, Hemberg M, Kim TK, Salogiannis J, Hu L, Cohen S, Lin Y, Harrar D, McInnes RR, Greenberg ME. Bhlhb5 and Prdm8 form a repressor complex involved in neuronal circuit assembly. Neuron. 73: 292-303. PMID 22284184 DOI: 10.1016/J.Neuron.2011.09.035  0.725
2011 Ramamoorthi K, Fropf R, Belfort GM, Fitzmaurice HL, McKinney RM, Neve RL, Otto T, Lin Y. Npas4 regulates a transcriptional program in CA3 required for contextual memory formation. Science (New York, N.Y.). 334: 1669-75. PMID 22194569 DOI: 10.1126/Science.1208049  0.775
2011 Ramamoorthi K, Lin Y. The contribution of GABAergic dysfunction to neurodevelopmental disorders. Trends in Molecular Medicine. 17: 452-62. PMID 21514225 DOI: 10.1016/J.Molmed.2011.03.003  0.357
2010 Chow BY, Han X, Dobry AS, Qian X, Chuong AS, Li M, Henninger MA, Belfort GM, Lin Y, Monahan PE, Boyden ES. High-performance genetically targetable optical neural silencing by light-driven proton pumps. Nature. 463: 98-102. PMID 20054397 DOI: 10.1038/Nature08652  0.756
2008 Lin Y, Bloodgood BL, Hauser JL, Lapan AD, Koon AC, Kim TK, Hu LS, Malik AN, Greenberg ME. Activity-dependent regulation of inhibitory synapse development by Npas4. Nature. 455: 1198-204. PMID 18815592 DOI: 10.1038/Nature07319  0.783
2008 Morrow EM, Yoo SY, Flavell SW, Kim TK, Lin Y, Hill RS, Mukaddes NM, Balkhy S, Gascon G, Hashmi A, Al-Saad S, Ware J, Joseph RM, Greenblatt R, Gleason D, et al. Identifying autism loci and genes by tracing recent shared ancestry. Science (New York, N.Y.). 321: 218-23. PMID 18621663 DOI: 10.1126/Science.1157657  0.771
2007 Paradis S, Harrar DB, Lin Y, Koon AC, Hauser JL, Griffith EC, Zhu L, Brass LF, Chen C, Greenberg ME. An RNAi-based approach identifies molecules required for glutamatergic and GABAergic synapse development. Neuron. 53: 217-32. PMID 17224404 DOI: 10.1016/J.Neuron.2006.12.012  0.791
2006 Zhou Z, Hong EJ, Cohen S, Zhao WN, Ho HY, Schmidt L, Chen WG, Lin Y, Savner E, Griffith EC, Hu L, Steen JA, Weitz CJ, Greenberg ME. Brain-specific phosphorylation of MeCP2 regulates activity-dependent Bdnf transcription, dendritic growth, and spine maturation. Neuron. 52: 255-69. PMID 17046689 DOI: 10.1016/J.Neuron.2006.09.037  0.783
2006 Flavell SW, Cowan CW, Kim TK, Greer PL, Lin Y, Paradis S, Griffith EC, Hu LS, Chen C, Greenberg ME. Activity-dependent regulation of MEF2 transcription factors suppresses excitatory synapse number. Science (New York, N.Y.). 311: 1008-12. PMID 16484497 DOI: 10.1126/Science.1122511  0.76
2004 Brunet A, Sweeney LB, Sturgill JF, Chua KF, Greer PL, Lin Y, Tran H, Ross SE, Mostoslavsky R, Cohen HY, Hu LS, Cheng HL, Jedrychowski MP, Gygi SP, Sinclair DA, et al. Stress-dependent regulation of FOXO transcription factors by the SIRT1 deacetylase. Science (New York, N.Y.). 303: 2011-5. PMID 14976264 DOI: 10.1126/Science.1094637  0.722
2003 Chen WG, Chang Q, Lin Y, Meissner A, West AE, Griffith EC, Jaenisch R, Greenberg ME. Derepression of BDNF transcription involves calcium-dependent phosphorylation of MeCP2. Science (New York, N.Y.). 302: 885-9. PMID 14593183 DOI: 10.1126/Science.1086446  0.723
1999 Lin Y, Fletcher CM, Zhou J, Allis CD, Wagner G. Solution structure of the catalytic domain of GCN5 histone acetyltransferase bound to coenzyme A. Nature. 400: 86-9. PMID 10403255 DOI: 10.1038/21922  0.31
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