Anne E. Carpenter
Affiliations: | The Broad Institute |
Area:
ImagingWebsite:
http://www.broadinstitute.org/~anne/Google:
"Anne Carpenter"Parents
Sign in to add mentor| Andrew Belmont | grad student | 1997-2003 | UIUC | |
| (Effects of transcriptional activators on large-scale chromatin structure.) | ||||
| David M. Sabatini | post-doc | Whitehead Institute for Biomedical Research (MIT) | ||
Children
Sign in to add trainee| Beth A Cimini | post-doc | Broad Institute | |
| Björn Nillson | post-doc | 2008- | The Broad Institute |
| Juan Carlos Caicedo Rueda | post-doc | 2016- | |
| Minh Doan | post-doc | 2016- | |
| Tim Becker | post-doc | 2017- | |
| Hamdah Shafqat Abbasi | post-doc | 2018- | |
| Imtiaz Khan | post-doc | 2010-2012 | The Broad Institute |
| Tammy Riklin-Raviv | post-doc | 2010-2012 | The Broad Institute |
| AJ (Hannes) Pretorius | post-doc | 2010-2013 | The Broad Institute |
| Shantanu Singh | post-doc | 2011-2014 | The Broad Institute |
| Holger Hennig | post-doc | 2013-2014 | The Broad Institute |
| Kyle Karhohs | post-doc | 2016-2018 | |
| Gregory P Way | post-doc | 2018-2021 | (Computational Biology Tree) |
| David J. Logan | research scientist | (Neurotree) | |
| Allen Goodman | research scientist | 2015- | |
| Beth E Cimini | research scientist | 2016- | |
| Mark-Anthony Peter Bray | research scientist | 2008-2016 | Broad Institute |
| Erin (Currie) Weisbart | research scientist | 2019-2021 | Broad Institute of Harvard and MIT |
BETA: Related publications
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Publications
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| Moshkov N, Bornholdt M, Benoit S, et al. (2024) Learning representations for image-based profiling of perturbations. Nature Communications. 15: 1594 |
| Weisbart E, Kumar A, Arevalo J, et al. (2024) Cell Painting Gallery: an open resource for image-based profiling. Arxiv |
| Seal S, Spjuth O, Hosseini-Gerami L, et al. (2024) Insights into Drug Cardiotoxicity from Biological and Chemical Data: The First Public Classifiers for FDA Drug-Induced Cardiotoxicity Rank. Journal of Chemical Information and Modeling |
| Carpenter AE, Singh S. (2024) Bringing computation to biology by bridging the last mile. Nature Cell Biology. 26: 5-7 |
| Tegtmeyer M, Arora J, Asgari S, et al. (2024) High-dimensional phenotyping to define the genetic basis of cellular morphology. Nature Communications. 15: 347 |
| Seal S, Carreras-Puigvert J, Singh S, et al. (2024) From Pixels to Phenotypes: Integrating Image-Based Profiling with Cell Health Data Improves Interpretability. Molecular Biology of the Cell. mbcE23080298 |
| Serrano E, Chandrasekaran SN, Bunten D, et al. (2023) Reproducible image-based profiling with Pycytominer. Arxiv |
| Seal S, Spjuth O, Hosseini-Gerami L, et al. (2023) Insights into Drug Cardiotoxicity from Biological and Chemical Data: The First Public Classifiers for FDA DICTrank. Biorxiv : the Preprint Server For Biology |
| Tromans-Coia C, Jamali N, Abbasi HS, et al. (2023) Assessing the performance of the Cell Painting assay across different imaging systems. Cytometry. Part a : the Journal of the International Society For Analytical Cytology |
| Kelley ME, Berman AY, Stirling DR, et al. (2023) High-content microscopy reveals a morphological signature of bortezomib resistance. Elife. 12 |