Alayne L. Brunner, Ph.D.

Affiliations: 
Stanford University, Palo Alto, CA 
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"Alayne Brunner"
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Richard Morris Myers grad student 2010 Stanford
 (Genome-wide analysis of mammalian DNA methylation patterns.)
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Publications

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Marques Howarth M, Simpson D, Ngok SP, et al. (2014) Long noncoding RNA EWSAT1-mediated gene repression facilitates Ewing sarcoma oncogenesis. The Journal of Clinical Investigation. 124: 5275-90
Brunner AL, Li J, Guo X, et al. (2014) A shared transcriptional program in early breast neoplasias despite genetic and clinical distinctions. Genome Biology. 15: R71
Guo X, Zhu SX, Brunner AL, et al. (2013) Next generation sequencing-based expression profiling identifies signatures from benign stromal proliferations that define stromal components of breast cancer. Breast Cancer Research : Bcr. 15: R117
Newburger DE, Kashef-Haghighi D, Weng Z, et al. (2013) Genome evolution during progression to breast cancer. Genome Research. 23: 1097-108
Brunner AL, Beck AH, Edris B, et al. (2012) Transcriptional profiling of long non-coding RNAs and novel transcribed regions across a diverse panel of archived human cancers. Genome Biology. 13: R75
Lee CH, Ou WB, Mariño-Enriquez A, et al. (2012) 14-3-3 fusion oncogenes in high-grade endometrial stromal sarcoma. Proceedings of the National Academy of Sciences of the United States of America. 109: 929-34
Brunner AL, Johnson DS, Kim SW, et al. (2009) Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver. Genome Research. 19: 1044-56
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