Nuno F. Bandeira, Ph.D.
Affiliations: | Computer Science and Engineering | University of California, San Diego, La Jolla, CA |
Area:
Bioinformatics, proteomics, mass spectrometryGoogle:
"Nuno Bandeira"Mean distance: 18.06 (cluster 17)
Parents
Sign in to add mentorPavel A. Pevzner | grad student | 2007 | UCSD | |
(Spectral networks algorithms for de novo interpretation of tandem mass spectra.) |
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Publications
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Zuffa S, Schmid R, Bauermeister A, et al. (2024) microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data. Nature Microbiology |
Omenn GS, Lane L, Overall CM, et al. (2024) The 2023 Report on the Proteome from the HUPO Human Proteome Project. Journal of Proteome Research |
Dorrestein P, Zuffa S, Schmid R, et al. (2023) A Taxonomically-informed Mass Spectrometry Search Tool for Microbial Metabolomics Data. Research Square |
Leão TF, Wang M, da Silva R, et al. (2022) NPOmix: A machine learning classifier to connect mass spectrometry fragmentation data to biosynthetic gene clusters. Pnas Nexus. 1: pgac257 |
Deutsch EW, Bandeira N, Perez-Riverol Y, et al. (2022) The ProteomeXchange consortium at 10 years: 2023 update. Nucleic Acids Research |
LeDuc RD, Deutsch EW, Binz PA, et al. (2022) Proteomics Standards Initiative's ProForma 2.0: Unifying the Encoding of Proteoforms and Peptidoforms. Journal of Proteome Research |
Petras D, Phelan VV, Acharya D, et al. (2021) GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser. Nature Methods |
Deutsch EW, Perez-Riverol Y, Carver J, et al. (2021) Universal Spectrum Identifier for mass spectra. Nature Methods |
Leão T, Wang M, Moss N, et al. (2021) A Multi-Omics Characterization of the Natural Product Potential of Tropical Filamentous Marine Cyanobacteria. Marine Drugs. 19 |
Hoopmann MR, Kusebauch U, Palmblad M, et al. (2020) Insights from the First Phosphopeptide Challenge of the MS Resource Pillar of the HUPO Human Proteome Project. Journal of Proteome Research |