Max Alekseyev, Ph.D.
Affiliations: | Computer Science and Engineering | University of California, San Diego, La Jolla, CA |
Area:
Bioinformatics, proteomics, mass spectrometryGoogle:
"Max Alekseyev"Mean distance: 18.06 (cluster 17)
Parents
Sign in to add mentor| Pavel A. Pevzner | grad student | 2007 | UCSD | |
| (Duplications and genome rearrangements.) | ||||
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Publications
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| Zamyatin A, Avdeyev P, Liang J, et al. (2021) Chromosome-level genome assemblies of the malaria vectors Anopheles coluzzii and Anopheles arabiensis. Gigascience. 10 |
| Avdeyev P, Alexeev N, Rong Y, et al. (2020) A Unified ILP Framework for Core Ancestral Genome Reconstruction Problems. Bioinformatics (Oxford, England) |
| Waterhouse RM, Aganezov S, Anselmetti Y, et al. (2020) Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies. Bmc Biology. 18: 1 |
| Avdeyev P, Jiang S, Alekseyev MA. (2019) Linearization of Median Genomes Under the Double-Cut-and-Join-Indel Model. Evolutionary Bioinformatics Online. 15: 1176934318820534 |
| Avdeyev P, Jiang S, Alekseyev MA. (2017) Implicit Transpositions in DCJ Scenarios. Frontiers in Genetics. 8: 212 |
| Aganezov SS, Alekseyev MA. (2017) CAMSA: a tool for comparative analysis and merging of scaffold assemblies. Bmc Bioinformatics. 18: 496 |
| Alexeev N, Pologova A, Alekseyev MA. (2017) Generalized Hultman Numbers and Cycle Structures of Breakpoint Graphs. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology |
| Alexeev N, Avdeyev P, Alekseyev MA. (2016) Comparative genomics meets topology: a novel view on genome median and halving problems. Bmc Bioinformatics. 17: 418 |
| Avdeyev P, Jiang S, Aganezov S, et al. (2016) Reconstruction of Ancestral Genomes in Presence of Gene Gain and Loss. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology |
| Liu YC, Hsu SD, Chou CH, et al. (2016) Transcriptome sequencing based annotation and homologous evidence based scaffolding of Anguilla japonica draft genome. Bmc Genomics. 17: 13 |