James C. Sullivan, Ph.D.

Affiliations: 
Boston University, Boston, MA, United States 
Area:
developmental evolution, evolutionary genomics
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"James Sullivan"

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John R. Finnerty grad student 2008 Boston University
 (Bioinformatic and molecular analyses of the Nematostella genome reveal a mixture of ancient conservation and rapid recent evolution.)
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Publications

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Ho CK, Welkers MR, Thomas XV, et al. (2015) A comparison of 454 sequencing and clonal sequencing for the characterization of hepatitis C virus NS3 variants. Journal of Virological Methods. 219: 28-37
Dierynck I, Thys K, Ghys A, et al. (2014) Deep-sequencing analysis of the gene encoding the hepatitis C virus nonstructural 3-4A protease confirms a low prevalence of telaprevir-resistant variants at baseline and the end of the REALIZE study. The Journal of Infectious Diseases. 210: 1871-80
Ray PS, Sullivan JC, Jia J, et al. (2011) Evolution of function of a fused metazoan tRNA synthetase. Molecular Biology and Evolution. 28: 437-47
Reitzel AM, Sullivan JC, Finnerty JR. (2010) Discovering SNPs in protein coding regions with stellasnp: Illustrating the characterization and geographic distribution of polymorphisms in the estuarine anemone nematostella vectensis Estuaries and Coasts. 33: 930-943
Sullivan JC, Wolenski FS, Reitzel AM, et al. (2009) Two alleles of NF-kappaB in the sea anemone Nematostella vectensis are widely dispersed in nature and encode proteins with distinct activities. Plos One. 4: e7311
Reitzel AM, Daly M, Sullivan JC, et al. (2009) Comparative anatomy and histology of developmental and parasitic stages in the life cycle of the lined sea anemone Edwardsiella lineata. The Journal of Parasitology. 95: 100-12
Sullivan JC, Sher D, Eisenstein M, et al. (2008) The evolutionary origin of the Runx/CBFbeta transcription factors--studies of the most basal metazoans. Bmc Evolutionary Biology. 8: 228
Reitzel AM, Sullivan JC, Traylor-Knowles N, et al. (2008) Genomic survey of candidate stress-response genes in the estuarine anemone Nematostella vectensis. The Biological Bulletin. 214: 233-54
Moran Y, Weinberger H, Reitzel AM, et al. (2008) Intron retention as a posttranscriptional regulatory mechanism of neurotoxin expression at early life stages of the starlet anemone Nematostella vectensis. Journal of Molecular Biology. 380: 437-43
Moran Y, Weinberger H, Sullivan JC, et al. (2008) Concerted evolution of sea anemone neurotoxin genes is revealed through analysis of the Nematostella vectensis genome. Molecular Biology and Evolution. 25: 737-47
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