John G. Gibbons, Ph.D.

Affiliations: 
Vanderbilt University, Nashville, TN 
Area:
Population genetics, evolution
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"John Gibbons"

Parents

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David E. McCauley grad student 2012 Vanderbilt
 (The function and evolution of the Aspergillus genome.)
Antonis Rokas grad student 2007-2012 Vanderbilt (Computational Biology Tree)
Bernardo L. Silva post-doc Harvard School of Public Health
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Publications

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Ghoshal M, Bechtel TD, Gibbons JG, et al. (2024) Transcriptomic analysis using RNA sequencing and phenotypic analysis of after acid exposure for different time durations using adaptive laboratory evolution. Frontiers in Microbiology. 15: 1348063
Steenwyk JL, Balamurugan C, Raja HA, et al. (2024) Phylogenomics reveals extensive misidentification of fungal strains from the genus . Microbiology Spectrum. e0398023
Ghoshal M, Bechtel TD, Gibbons JG, et al. (2023) Adaptive laboratory evolution of in acid stress. Frontiers in Microbiology. 14: 1285421
Sierra-Patev S, Min B, Naranjo-Ortiz M, et al. (2023) A global phylogenomic analysis of the shiitake genus . Proceedings of the National Academy of Sciences of the United States of America. 120: e2214076120
Gibbons JG, D'Avino P, Zhao S, et al. (2022) Comparative Genomics Reveals a Single Nucleotide Deletion in That Results in White-Spore Phenotype in Natural Variants of . Frontiers in Fungal Biology. 3: 897954
Zhao S, Martin-Vicente A, Colabardini AC, et al. (2022) Genomic and Molecular Identification of Genes Contributing to the Caspofungin Paradoxical Effect in . Microbiology Spectrum. e0051922
Horta MAC, Steenwyk JL, Mead ME, et al. (2022) Examination of Genome-Wide Ortholog Variation in Clinical and Environmental Isolates of the Fungal Pathogen Aspergillus fumigatus. Mbio. e0151922
Zhang J, Walker ME, Sanidad KZ, et al. (2022) Microbial enzymes induce colitis by reactivating triclosan in the mouse gastrointestinal tract. Nature Communications. 13: 136
Zhao S, Ge W, Watanabe A, et al. (2021) Genome-Wide Association for Itraconazole Sensitivity in Non-resistant Clinical Isolates of . Frontiers in Fungal Biology. 1: 617338
Yuan Z, Druzhinina IS, Gibbons JG, et al. (2021) Correction: Divergence of a genomic island leads to the evolution of melanization in a halophyte root fungus. The Isme Journal
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