Mukta Phatak, Ph.D.

Affiliations: 
2010 Biomedical Engineering University of Cincinnati, Cincinnati, OH 
Area:
bioinformatics, computational genomics, protein structure
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Jaroslaw Meller grad student 2010 University of Cincinnati
 (Lipid accessibility prediction and identification of functional hotspots in transmembrane proteins.)
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Publications

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Chen J, Hu Z, Phatak M, et al. (2013) Genome-wide signatures of transcription factor activity: connecting transcription factors, disease, and small molecules. Plos Computational Biology. 9: e1003198
Phatak M, Adamczak R, Cao B, et al. (2011) Solvent and lipid accessibility prediction as a basis for model quality assessment in soluble and membrane proteins. Current Protein & Peptide Science. 12: 563-73
Freudenberg JM, Sivaganesan S, Phatak M, et al. (2011) Generalized random set framework for functional enrichment analysis using primary genomics datasets. Bioinformatics (Oxford, England). 27: 70-7
Shinde K, Phatak M, Johannes FM, et al. (2010) Genomics Portals: integrative web-platform for mining genomics data. Bmc Genomics. 11: 27
Freudenberg JM, Sivaganesan S, Phatak M, et al. (2010) Generalized Random Sets for functional enrichment analysis using primary genomics datasets F1000research. 1
Phatak M, Meller J. (2010) Model quality assessment in membrane proteins using predicted lipid accessibility profiles 11th International Symposium On Artificial Intelligence and Mathematics, Isaim 2010
Sinha AU, Phatak M, Bhatnagar R, et al. (2007) Identifying functional binding motifs of tumor protein p53 using support vector machines Proceedings - 6th International Conference On Machine Learning and Applications, Icmla 2007. 506-511
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