Douglas H. Phanstiel, Ph.D.
Affiliations: | 2011 | University of Wisconsin, Madison, Madison, WI |
Area:
Bioanalytical Chemistry, Mass Spectrometry & ProteomicsGoogle:
"Douglas Phanstiel"Mean distance: 10.04 | S | N | B | C | P |
Parents
Sign in to add mentor| Joshua J. Coon | grad student | 2011 | UW Madison | |
| (The development and application of quantitative proteomic methods for the analysis of human embryonic and induced pluripotent stem cells.) | ||||
| Michael Snyder | post-doc | Stanford (Computational Biology Tree) | ||
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Publications
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| McAfee JC, Lee S, Lee J, et al. (2023) Systematic investigation of allelic regulatory activity of schizophrenia-associated common variants. Cell Genomics. 3: 100404 |
| Kramer NE, Davis ES, Wenger CD, et al. (2022) Plotgardener: Cultivating precise multi-panel figures in R. Bioinformatics (Oxford, England) |
| Matoba N, Quiroga IY, Phanstiel DH, et al. (2020) Mapping Alzheimer's Disease Variants to Their Target Genes Using Computational Analysis of Chromatin Configuration. Journal of Visualized Experiments : Jove |
| Patwardhan MN, Wenger CD, Davis ES, et al. (2019) Bedtoolsr: An R package for genomic data analysis and manipulation. Journal of Open Source Software. 4 |
| Tycko J, Wainberg M, Marinov GK, et al. (2019) Mitigation of off-target toxicity in CRISPR-Cas9 screens for essential non-coding elements. Nature Communications. 10: 4063 |
| Metz KS, Deoudes EM, Berginski ME, et al. (2018) Coral: Clear and Customizable Visualization of Human Kinome Data. Cell Systems |
| Van Bortle K, Phanstiel DH, Snyder MP. (2017) Topological organization and dynamic regulation of human tRNA genes during macrophage differentiation. Genome Biology. 18: 180 |
| Phanstiel DH, Van Bortle K, Spacek D, et al. (2017) Static and Dynamic DNA Loops form AP-1-Bound Activation Hubs during Macrophage Development. Molecular Cell |
| Grubert F, Zaugg JB, Kasowski M, et al. (2015) Genetic Control of Chromatin States in Humans Involves Local and Distal Chromosomal Interactions. Cell |
| Phanstiel DH, Boyle AP, Heidari N, et al. (2015) Mango: A bias correcting ChIA-PET analysis pipeline. Bioinformatics (Oxford, England) |