Ali Navid, Ph.D.
Affiliations: | 2004 | Indiana University, Bloomington, Bloomington, IN, United States |
Area:
systems biology, physical chemistryGoogle:
"Ali Navid"Mean distance: 20.65 | S | N | B | C | P |
Parents
Sign in to add mentor| Peter J. Ortoleva | grad student | 2004 | Indiana University | |
| (In silico modeling of metabolism in eukaryotic cells.) | ||||
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Publications
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| Georgouli K, Yeom JS, Blake RC, et al. (2023) Multi-scale models of whole cells: progress and challenges. Frontiers in Cell and Developmental Biology. 11: 1260507 |
| Windler M, Stuart R, Deutzmann JS, et al. (2022) Bacterial exometabolites influence Chlamydomonas cell cycle and double algal productivity. Fems Microbiology Ecology |
| Navid A. (2022) A Beginner's Guide to the COBRA Toolbox. Methods in Molecular Biology (Clifton, N.J.). 2349: 339-365 |
| Navid A. (2022) Curating COBRA Models of Microbial Metabolism. Methods in Molecular Biology (Clifton, N.J.). 2349: 321-338 |
| Navid A, Jiao Y, Wong SE, et al. (2019) System-level analysis of metabolic trade-offs during anaerobic photoheterotrophic growth in Rhodopseudomonas palustris. Bmc Bioinformatics. 20: 233 |
| Griesemer M, Kimbrel JA, Zhou CE, et al. (2018) Combining multiple functional annotation tools increases coverage of metabolic annotation. Bmc Genomics. 19: 948 |
| Ebrahim A, Almaas E, Bauer E, et al. (2015) Do genome-scale models need exact solvers or clearer standards? Molecular Systems Biology. 11: 831 |
| Chaudhury S, Abdulhameed MD, Singh N, et al. (2013) Rapid countermeasure discovery against Francisella tularensis based on a metabolic network reconstruction. Plos One. 8: e63369 |
| Stewart BJ, Navid A, Kulp KS, et al. (2013) D-Lactate production as a function of glucose metabolism in Saccharomyces cerevisiae. Yeast (Chichester, England). 30: 81-91 |
| Navid A, Almaas E. (2012) Genome-level transcription data of Yersinia pestis analyzed with a new metabolic constraint-based approach. Bmc Systems Biology. 6: 150 |