Abdallah Sayyed-Ahmad, Ph.D.
Affiliations: | 2005 | Indiana University, Bloomington, Bloomington, IN, United States |
Area:
systems biology, physical chemistryGoogle:
"Abdallah Sayyed-Ahmad"Mean distance: 20.65 | S | N | B | C | P |
Parents
Sign in to add mentor| Peter J. Ortoleva | grad student | 2005 | Indiana University Bloomington | |
| (Modeling cells and macromolecules through mesoscopic and information theories.) | ||||
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Publications
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| Khaled M, Gorfe A, Sayyed-Ahmad A. (2019) Conformational and Dynamical Effects of Tyr32 Phosphorylation in K-Ras: Molecular Dynamics Simulation and Markov State Models Analysis. The Journal of Physical Chemistry. B |
| Sarkar-Banerjee S, Sayyed-Ahmad A, Prakash P, et al. (2017) Spatiotemporal analysis of K-Ras plasma membrane interactions reveals multiple high order homo-oligomeric complexes. Journal of the American Chemical Society |
| Sayyed-Ahmad A, Prakash P, Gorfe AA. (2017) Distinct dynamics and interaction patterns in H- and K-Ras oncogenic P-loop mutants. Proteins |
| Sayyed-Ahmad A, Gorfe AA. (2017) Mixed-probe simulation and probe-derived surface topography map analysis for ligand binding site identification. Journal of Chemical Theory and Computation |
| Prakash P, Sayyed-Ahmad A, Cho KJ, et al. (2017) Computational and biochemical characterization of two partially overlapping interfaces and multiple weak-affinity K-Ras dimers. Scientific Reports. 7: 40109 |
| Sayyed-Ahmad A, Cho KJ, Hancock JF, et al. (2016) Computational Equilibrium Thermodynamic and Kinetic Analysis of K-Ras Dimerization through an Effector Binding Surface Suggests Limited Functional Role. The Journal of Physical Chemistry. B |
| Naddaf L, Sayyed-Ahmad A. (2014) Intracellular crowding effects on the self-association of the bacterial cell division protein FtsZ. Archives of Biochemistry and Biophysics. 564: 12-9 |
| Sayyed-Ahmad A, Kaznessis YN. (2009) Determining the orientation of protegrin-1 in DLPC bilayers using an implicit solvent-membrane model. Plos One. 4: e4799 |
| Bolintineanu DS, Sayyed-Ahmad A, Davis HT, et al. (2009) Poisson-Nernst-Planck models of nonequilibrium ion electrodiffusion through a protegrin transmembrane pore. Plos Computational Biology. 5: e1000277 |
| Sayyed-Ahmad A, Miao Y, Ortoleva P. (2008) Poisson-Boltzmann theory of bionanosystems Communications in Computational Physics. 3: 1100-1116 |