Omer Gokcumen, Ph.D.
Affiliations: | 2008 | University of Pennsylvania, Philadelphia, PA, United States |
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"Omer Gokcumen"Parents
Sign in to add mentor| Theodore G. Schurr | grad student | 2008 | Penn | |
| (Ethnohistorical and genetic survey of four Central Anatolian settlements.) | ||||
| Charles Lee | post-doc | Harvard Medical School (GenetiTree) | ||
Children
Sign in to add trainee| Alber Aqil | grad student | 2019- | SUNY Buffalo (GenetiTree) |
| Kendra Scheer | grad student | 2021- | SUNY Buffalo (GenetiTree) |
| Luane Landau | grad student | 2022- | SUNY Buffalo (GenetiTree) |
| Duo 'Erica' Xu | grad student | 2013-2018 | SUNY Buffalo |
| Yen Lung ‘Onta’ Lin | grad student | 2014-2019 | SUNY Buffalo |
| Petar Pajic | grad student | 2020-2024 | SUNY Buffalo (GenetiTree) |
| Charikleia Karageorgiou | post-doc | 2023- | SUNY Buffalo (Evolution Tree) |
| Eaaswarkhanth Muthukrishnan | post-doc | 2014-2016 | SUNY Buffalo |
| Marie Saitou | post-doc | 2017-2020 | SUNY Buffalo (GenetiTree) |
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Publications
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| Yilmaz F, Karageorgiou C, Kim K, et al. (2023) Ancient gene duplications primed the amylase locus for adaptive evolution upon the onset of agriculture. Biorxiv : the Preprint Server For Biology |
| Russell M, Aqil A, Saitou M, et al. (2023) Gene communities in co-expression networks across different tissues. Plos Computational Biology. 19: e1011616 |
| Veilleux CC, Garrett EC, Pajic P, et al. (2023) Human subsistence and signatures of selection on chemosensory genes. Communications Biology. 6: 683 |
| Russell M, Saitou M, Gokcumen O, et al. (2023) Gene communities in co-expression networks across different tissues. Arxiv |
| Aqil A, Gill S, Gokcumen O, et al. (2023) A paleogenome from a Holocene individual supports genetic continuity in Southeast Alaska. Iscience. 26: 106581 |
| Sun YH, Cui H, Song C, et al. (2023) Amniotes co-opt intrinsic genetic instability to protect germ-line genome integrity. Nature Communications. 14: 812 |
| Aqil A, Speidel L, Pavlidis P, et al. (2023) Balancing selection on genomic deletion polymorphisms in humans. Elife. 12 |
| Campelo Dos Santos AL, Owings A, Sullasi HSL, et al. (2022) Genomic evidence for ancient human migration routes along South America's Atlantic coast. Proceedings. Biological Sciences. 289: 20221078 |
| Pajic P, Shen S, Qu J, et al. (2022) A mechanism of gene evolution generating mucin function. Science Advances. 8: eabm8757 |
| Saitou M, Masuda N, Gokcumen O. (2021) Similarity-based analysis of allele frequency distribution among multiple populations identifies adaptive genomic structural variants. Molecular Biology and Evolution |