Trygve E. Bakken

Allen Institute for Brain Science, Seattle, WA, United States 
computational neuroscience, imaging genetics
"Trygve Bakken"
Mean distance: 12.99 (cluster 11)


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Nicholas Schork grad student 2007-2011 UCSD
 (Scaling and Genetics of Neural Architecture.)
Charles F. Stevens grad student 2007-2011 UCSD
 (Scaling and Genetics of Neural Architecture.)
Edward S. Lein research scientist 2013- Allen Institute
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Luo C, Liu H, Xie F, et al. (2022) Single nucleus multi-omics identifies human cortical cell regulatory genome diversity. Cell Genomics. 2
Berg J, Sorensen SA, Ting JT, et al. (2021) Human neocortical expansion involves glutamatergic neuron diversification. Nature. 598: 151-158
Bakken TE, Jorstad NL, Hu Q, et al. (2021) Comparative cellular analysis of motor cortex in human, marmoset and mouse. Nature. 598: 111-119
Bakken TE, van Velthoven CT, Menon V, et al. (2021) Single-cell and single-nucleus RNA-seq uncovers shared and distinct axes of variation in dorsal LGN neurons in mice, non-human primates, and humans. Elife. 10
Aevermann BD, Zhang Y, Novotny M, et al. (2021) A machine learning method for the discovery of minimum marker gene combinations for cell-type identification from single-cell RNA sequencing. Genome Research
Huang AY, Li P, Rodin RE, et al. (2020) Parallel RNA and DNA analysis after deep sequencing (PRDD-seq) reveals cell type-specific lineage patterns in human brain. Proceedings of the National Academy of Sciences of the United States of America
Hodge RD, Miller JA, Novotny M, et al. (2020) Transcriptomic evidence that von Economo neurons are regionally specialized extratelencephalic-projecting excitatory neurons. Nature Communications. 11: 1172
Smith SJ, Sümbül U, Graybuck LT, et al. (2019) Single-cell transcriptomic evidence for dense intracortical neuropeptide networks. Elife. 8
Weed N, Bakken T, Graddis N, et al. (2019) Identification of genetic markers for cortical areas using a Random Forest classification routine and the Allen Mouse Brain Atlas. Plos One. 14: e0212898
Hodge RD, Bakken TE, Miller JA, et al. (2019) Conserved cell types with divergent features in human versus mouse cortex. Nature
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