Trygve E. Bakken
Affiliations: | Allen Institute for Brain Science, Seattle, WA, United States |
Area:
computational neuroscience, imaging geneticsGoogle:
"Trygve Bakken"Mean distance: 12.99 (cluster 11) | S | N | B | C | P |
Parents
Sign in to add mentor| Nicholas Schork | grad student | 2007-2011 | UCSD | |
| (Scaling and Genetics of Neural Architecture.) | ||||
| Charles F. Stevens | grad student | 2007-2011 | UCSD | |
| (Scaling and Genetics of Neural Architecture.) | ||||
| Edward S. Lein | research scientist | 2013- | Allen Institute | |
BETA: Related publications
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Publications
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| Luo C, Liu H, Xie F, et al. (2022) Single nucleus multi-omics identifies human cortical cell regulatory genome diversity. Cell Genomics. 2 |
| Berg J, Sorensen SA, Ting JT, et al. (2021) Human neocortical expansion involves glutamatergic neuron diversification. Nature. 598: 151-158 |
| Bakken TE, Jorstad NL, Hu Q, et al. (2021) Comparative cellular analysis of motor cortex in human, marmoset and mouse. Nature. 598: 111-119 |
| Bakken TE, van Velthoven CT, Menon V, et al. (2021) Single-cell and single-nucleus RNA-seq uncovers shared and distinct axes of variation in dorsal LGN neurons in mice, non-human primates, and humans. Elife. 10 |
| Aevermann BD, Zhang Y, Novotny M, et al. (2021) A machine learning method for the discovery of minimum marker gene combinations for cell-type identification from single-cell RNA sequencing. Genome Research |
| Huang AY, Li P, Rodin RE, et al. (2020) Parallel RNA and DNA analysis after deep sequencing (PRDD-seq) reveals cell type-specific lineage patterns in human brain. Proceedings of the National Academy of Sciences of the United States of America |
| Hodge RD, Miller JA, Novotny M, et al. (2020) Transcriptomic evidence that von Economo neurons are regionally specialized extratelencephalic-projecting excitatory neurons. Nature Communications. 11: 1172 |
| Smith SJ, Sümbül U, Graybuck LT, et al. (2019) Single-cell transcriptomic evidence for dense intracortical neuropeptide networks. Elife. 8 |
| Weed N, Bakken T, Graddis N, et al. (2019) Identification of genetic markers for cortical areas using a Random Forest classification routine and the Allen Mouse Brain Atlas. Plos One. 14: e0212898 |
| Hodge RD, Bakken TE, Miller JA, et al. (2019) Conserved cell types with divergent features in human versus mouse cortex. Nature |