Gary Jay Olsen
Affiliations: | University of Illinois, Urbana-Champaign, Urbana-Champaign, IL |
Area:
Microbiology BiologyWebsite:
https://mcb.illinois.edu/faculty/profile/gjo/Google:
"Gary Jay Olsen"Bio:
Parents
Sign in to add mentorMitchell L. Sogin | grad student | 1983 | CU Boulder (Chemistry Tree) | |
(Comparative analysis of nucleotide sequence data.) |
Children
Sign in to add traineeJonathan Badger | grad student | (Evolution Tree) | |
David E. Graham | grad student | 2000 | UIUC |
Gretchen M. Colon Gonzalez | grad student | 2001 | UIUC |
Leslie K. McNeil | grad student | 2002 | UIUC |
Enhu Li | grad student | 2007 | UIUC |
Brian Dorvel | grad student | 2013 | UIUC |
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Publications
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Davis JJ, Wattam AR, Aziz RK, et al. (2019) The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities. Nucleic Acids Research |
Zhang C, Phillips APR, Wipfler RL, et al. (2018) The essential genome of the crenarchaeal model Sulfolobus islandicus. Nature Communications. 9: 4908 |
Antonopoulos DA, Assaf R, Aziz RK, et al. (2017) PATRIC as a unique resource for studying antimicrobial resistance. Briefings in Bioinformatics |
Wattam AR, Davis JJ, Assaf R, et al. (2016) Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center. Nucleic Acids Research |
Davis JJ, Gerdes S, Olsen GJ, et al. (2016) PATtyFams: Protein Families for the Microbial Genomes in the PATRIC Database. Frontiers in Microbiology. 7: 118 |
Wetzel ME, Olsen GJ, Chakravartty V, et al. (2015) The repABC Plasmids with Quorum-Regulated Transfer Systems in Members of the Rhizobiales Divide into Two Structurally and Separately Evolving Groups. Genome Biology and Evolution. 7: 3337-57 |
Matthews TD, Schmieder R, Silva GG, et al. (2015) Genomic Comparison of the Closely-Related Salmonella enterica Serovars Enteritidis, Dublin and Gallinarum. Plos One. 10: e0126883 |
Brettin T, Davis JJ, Disz T, et al. (2015) RASTtk: a modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes. Scientific Reports. 5: 8365 |
Davis JJ, Olsen GJ, Overbeek R, et al. (2014) In search of genome annotation consistency: solid gene clusters and how to use them. 3 Biotech. 4: 331-335 |
Wetzel ME, Kim KS, Miller M, et al. (2014) Quorum-dependent mannopine-inducible conjugative transfer of an Agrobacterium opine-catabolic plasmid. Journal of Bacteriology. 196: 1031-44 |