Tandy Jo Warnow
Affiliations: | 1999-2014 | University of Texas at Austin, Austin, Texas, U.S.A. | |
| 2014- | University of Illinois, Urbana-Champaign, Urbana-Champaign, IL |
Area:
Computer ScienceWebsite:
http://tandy.cs.illinois.edu/Google:
"Tandy Jo Warnow"Bio:
https://ece.illinois.edu/directory/profile/warnow
http://www.cs.utexas.edu/users/tandy/
https://www.genealogy.math.ndsu.nodak.edu/id.php?id=32067
Parents
Sign in to add mentor| Eugene Leighton Lawler | grad student | 1991 | UC Berkeley | |
| (Combinational Algorithms for Constructing Phylogenetic Trees.) | ||||
| Simon Tavare | post-doc | 1991-1992 | USC (MathTree) | |
| Michael Spencer Waterman | post-doc | 1991-1992 | USC (MathTree) | |
Children
Sign in to add trainee| Li-San Wang | grad student | 2003 | UT Austin |
| Luay Nakhleh | grad student | 2004 | UT Austin |
| Usman W. Roshan | grad student | 2004 | UT Austin |
| Michelle D. Swenson | grad student | 2009 | UT Austin |
| Siavash Mirarab | grad student | 2011-2015 | UT Austin (Neurotree) |
BETA: Related publications
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Publications
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| Tabatabaee Y, Roch S, Warnow T. (2023) QR-STAR: A Polynomial-Time Statistically Consistent Method for Rooting Species Trees Under the Coalescent. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology |
| Liu B, Warnow T. (2023) Weighted ASTRID: fast and accurate species trees from weighted internode distances. Algorithms For Molecular Biology : Amb. 18: 6 |
| Tabatabaee Y, Zhang C, Warnow T, et al. (2023) Phylogenomic branch length estimation using quartets. Bioinformatics (Oxford, England). 39: i185-i193 |
| Park M, Warnow T. (2023) HMMerge: an ensemble method for multiple sequence alignment. Bioinformatics Advances. 3: vbad052 |
| Liu B, Warnow T. (2023) WITCH-NG: efficient and accurate alignment of datasets with sequence length heterogeneity. Bioinformatics Advances. 3: vbad024 |
| Chu G, Warnow T. (2023) SCAMPP+FastTree: improving scalability for likelihood-based phylogenetic placement. Bioinformatics Advances. 3: vbad008 |
| Willson J, Tabatabaee Y, Liu B, et al. (2023) DISCO+QR: rooting species trees in the presence of GDL and ILS. Bioinformatics Advances. 3: vbad015 |
| Park M, Ivanovic S, Chu G, et al. (2023) UPP2: fast and accurate alignment of datasets with fragmentary sequences. Bioinformatics (Oxford, England). 39 |
| Zaharias P, Warnow T. (2022) Recent progress on methods for estimating and updating large phylogenies. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 377: 20210244 |
| Zaharias P, Smirnov V, Warnow T. (2022) Large-Scale Multiple Sequence Alignment and the Maximum Weight Trace Alignment Merging Problem. Ieee/Acm Transactions On Computational Biology and Bioinformatics |