Jumi Shin
Affiliations: | Chemistry | University of Toronto, Toronto, ON, Canada |
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Publications
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Inamoto I, Sheoran I, Popa SC, et al. (2020) Combining Rational Design and Continuous Evolution on Minimalist Proteins That Target the E-box DNA Site. Acs Chemical Biology |
Popa SC, Inamoto I, Thuronyi BW, et al. (2020) Phage-Assisted Continuous Evolution (PACE): A Guide Focused on Evolving Protein-DNA Interactions. Acs Omega. 5: 26957-26966 |
Inamoto I, Chen G, Shin JA. (2017) The DNA target determines the dimerization partner selected by bHLHZ-like hybrid proteins AhRJun and ArntFos. Molecular Biosystems |
Chan IS, Al-Sarraj T, Shahravan SH, et al. (2012) The bZIP dimer localizes at DNA full-sites where each basic region can alternately translocate and bind to subsites at the half-site. Biochemistry. 51: 6632-43 |
Ahmadpour F, Ghirlando R, De Jong AT, et al. (2012) Crystal structure of the minimalist Max-E47 protein chimera. Plos One. 7: e32136 |
Chen G, De Jong AT, Shin JA. (2012) Forced homodimerization of the c-Fos leucine zipper in designed bHLHZ-like hybrid proteins MaxbHLH-Fos and ArntbHLH-Fos. Molecular Biosystems. 8: 1286-96 |
Shahravan SH, Li IT, Truong K, et al. (2011) FRep: a fluorescent protein-based bioprobe for in vivo detection of protein-DNA interactions. Analytical Chemistry. 83: 9643-50 |
Xu J, De Jong AT, Chen G, et al. (2010) Reengineering natural design by rational design and in vivo library selection: the HLH subdomain in bHLHZ proteins is a unique requirement for DNA-binding function. Protein Engineering, Design & Selection : Peds. 23: 337-46 |
Xu J, Chen G, De Jong AT, et al. (2009) Max-E47, a designed minimalist protein that targets the E-box DNA site in vivo and in vitro. Journal of the American Chemical Society. 131: 7839-48 |
Chow HK, Xu J, Shahravan SH, et al. (2008) Hybrids of the bHLH and bZIP protein motifs display different DNA-binding activities in vivo vs. in vitro. Plos One. 3: e3514 |