John Patrick Cunningham, Phd

Electrical Engineering Stanford University, Palo Alto, CA 
 Columbia University, New York, NY 
Computation and Theory, Theoretical Neuroscience, Cognitive/Systems Neuroscience, statistical Machine Learning, Motor Systems
"John Cunningham"
Mean distance: 14.7 (cluster 17)
Cross-listing: Physics Tree


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Krishna V. Shenoy grad student 2004-2009 Stanford
 (Algorithms for understanding motor cortical processing and neural prosthetic systems.)
Krishna V. Shenoy post-doc 2009-2009 Stanford


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Farzaneh Najafi collaborator 2015-2018 Columbia
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Marshall NJ, Glaser JI, Trautmann EM, et al. (2022) Flexible neural control of motor units. Nature Neuroscience
Abe T, Kinsella I, Saxena S, et al. (2022) Neuroscience Cloud Analysis As a Service: An open-source platform for scalable, reproducible data analysis. Neuron
Saxena S, Russo AA, Cunningham J, et al. (2022) Motor cortex activity across movement speeds is predicted by network-level strategies for generating muscle activity. Elife. 11
Whiteway MR, Biderman D, Friedman Y, et al. (2021) Partitioning variability in animal behavioral videos using semi-supervised variational autoencoders. Plos Computational Biology. 17: e1009439
Couto J, Musall S, Sun XR, et al. (2021) Chronic, cortex-wide imaging of specific cell populations during behavior. Nature Protocols
Kimmel DL, Elsayed GF, Cunningham JP, et al. (2020) Value and choice as separable and stable representations in orbitofrontal cortex. Nature Communications. 11: 3466
Russo AA, Khajeh R, Bittner SR, et al. (2020) Neural Trajectories in the Supplementary Motor Area and Motor Cortex Exhibit Distinct Geometries, Compatible with Different Classes of Computation. Neuron
Saxena S, Kinsella I, Musall S, et al. (2020) Localized semi-nonnegative matrix factorization (LocaNMF) of widefield calcium imaging data. Plos Computational Biology. 16: e1007791
Najafi F, Elsayed GF, Cao R, et al. (2019) Excitatory and Inhibitory Subnetworks Are Equally Selective during Decision-Making and Emerge Simultaneously during Learning. Neuron
Saxena S, Cunningham JP. (2019) Towards the neural population doctrine. Current Opinion in Neurobiology. 55: 103-111
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