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Patrick O. Brown

Affiliations: 
Biochemistry Stanford University, Palo Alto, CA 
Area:
gene expression
Website:
http://brownlab.stanford.edu/Pat_Brown_Lab_Home_Page/Home.html
Google:
"Patrick O. Brown"
Bio:

http://med.stanford.edu/profiles/cancer/faculty/Patrick_Brown/
http://www.nasonline.org/member-directory/members/3006491.html
http://cmgm.stanford.edu/pbrown

Cross-listing: Chemistry Tree

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Parents

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Nicholas R. Cozzarelli grad student 1980 Chicago
J. Michael Bishop post-doc 1985-1988 UCSF
Harold Elliot Varmus post-doc 1985-1988 UCSF (DevTree)

Children

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Jennifer L. Gerton grad student Stanford School of Medicine (Cell Biology Tree)
Joseph DeRisi grad student 1999 Stanford (Chemistry Tree)
Audrey P. Gasch grad student 2000 Stanford
Brian P. Scottoline grad student 2000 Stanford
Stephen M. Rothenberg grad student 2002 Stanford
Arash A. Alizadeh grad student 2003 Stanford
Maximilian Diehn grad student 2004 Stanford
Evan Hurowitz grad student 2005 Stanford
Caroline E. Uhlik grad student 2005 Stanford
Chana Palmer grad student 2006 Stanford
Kathleen H. Rubins grad student 2006 Stanford
Julie B. Sneddon grad student 2006 Stanford
Heather L. McCullough grad student 2009 Stanford
Michael B Eisen post-doc (Neurotree)
Vishwanath R Iyer post-doc Stanford Medical School (Chemistry Tree)
Liana Faye Lareau post-doc
Michael B. Eisen post-doc 1996-2000 Stanford Medical School
Brian Brummeler Haab post-doc 1999-2000 Stanford (Cell Biology Tree)
Orly Alter post-doc 2004 Stanford (Physics Tree)
Howard Y. Chang post-doc 2000-2004 Stanford (Chemistry Tree)

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Publications

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Koh W, Gonzalez V, Natarajan S, et al. (2016) Dynamic ASXL1 Exon Skipping and Alternative Circular Splicing in Single Human Cells. Plos One. 11: e0164085
Hogan GJ, Brown PO, Herschlag D. (2015) Evolutionary Conservation and Diversification of Puf RNA Binding Proteins and Their mRNA Targets. Plos Biology. 13: e1002307
Lovejoy AF, Riordan DP, Brown PO. (2014) Transcriptome-wide mapping of pseudouridines: pseudouridine synthases modify specific mRNAs in S. cerevisiae. Plos One. 9: e110799
Lareau LF, Hite DH, Hogan GJ, et al. (2014) Distinct stages of the translation elongation cycle revealed by sequencing ribosome-protected mRNA fragments. Elife. 3: e01257
Wang PL, Bao Y, Yee MC, et al. (2014) Circular RNA is expressed across the eukaryotic tree of life. Plos One. 9: e90859
Lareau LF, Hite DH, Hogan GJ, et al. (2014) Author response: Distinct stages of the translation elongation cycle revealed by sequencing ribosome-protected mRNA fragments Elife
Salzman J, Chen RE, Olsen MN, et al. (2013) Cell-type specific features of circular RNA expression. Plos Genetics. 9: e1003777
Salzman J, Klass DM, Brown PO. (2013) Improved discovery of molecular interactions in genome-scale data with adaptive model-based normalization. Plos One. 8: e53930
Bates JG, Salzman J, May D, et al. (2012) Extensive gene-specific translational reprogramming in a model of B cell differentiation and Abl-dependent transformation. Plos One. 7: e37108
Salzman J, Gawad C, Wang PL, et al. (2012) Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types. Plos One. 7: e30733
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