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Gary Benson

Affiliations: 
Bioinformatics GRS Boston University, Boston, MA, United States 
Area:
Bioinformatics Biology, Molecular Biology, Pathology
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Parents

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Amihood Amir grad student 1992 University of Maryland (Computer Science Tree)
 (Dissertation: "Two-dimensional periodicity and matching algorithms")

Children

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Denise Y. Mak grad student 2009 Boston University
Daniel Antonio Negrón research scientist 2008-2009 Boston University (Computational Biology Tree)

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Publications

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Benson G, Farach-Colton M, Lewenstein M, et al. (2016) Special issue in honor of the 60th birthday of Amihood Amir Theoretical Computer Science. 638: 1-2
Loving J, Hernandez Y, Benson G. (2014) BitPAl: A bit-parallel, general integer-scoring sequence alignment algorithm Bioinformatics. 30: 3166-3173
Gelfand Y, Hernandez Y, Loving J, et al. (2014) VNTRseek-a computational tool to detect tandem repeat variants in high-throughput sequencing data. Nucleic Acids Research. 42: 8884-94
Sebastiani P, Riva A, Montano M, et al. (2011) Whole genome sequences of a male and female supercentenarian, ages greater than 114 years. Frontiers in Genetics. 2: 90
Visca P, D'Arezzo S, Ramisse F, et al. (2011) Investigation of the population structure of Legionella pneumophila by analysis of tandem repeat copy number and internal sequence variation. Microbiology (Reading, England). 157: 2582-94
Strawbridge EM, Benson G, Gelfand Y, et al. (2010) The distribution of inverted repeat sequences in the Saccharomyces cerevisiae genome. Current Genetics. 56: 321-40
Mak DYF, Benson G. (2009) All hits all the time: Parameter-free calculation of spaced seed sensitivity Bioinformatics. 25: 302-308
Amir A, Aumann Y, Benson G, et al. (2009) Pattern matching with address errors: Rearrangement distances Journal of Computer and System Sciences. 75: 359-370
Andken BB, Lim I, Benson G, et al. (2007) 3'-UTR SIRF: a database for identifying clusters of whort interspersed repeats in 3' untranslated regions. Bmc Bioinformatics. 8: 274
Giordano J, Ge Y, Gelfand Y, et al. (2007) Evolutionary history of mammalian transposons determined by genome-wide defragmentation. Plos Computational Biology. 3: e137
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