Debasish Raha
Affiliations: | Yale University, New Haven, CT |
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Tilgner H, Raha D, Habegger L, et al. (2013) Accurate identification and analysis of human mRNA isoforms using deep long read sequencing. G3 (Bethesda, Md.). 3: 387-97 |
Huang XA, Yin H, Sweeney S, et al. (2013) A major epigenetic programming mechanism guided by piRNAs. Developmental Cell. 24: 502-16 |
Landt SG, Marinov GK, Kundaje A, et al. (2012) ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia. Genome Research. 22: 1813-31 |
Kundaje A, Kyriazopoulou-Panagiotopoulou S, Libbrecht M, et al. (2012) Ubiquitous heterogeneity and asymmetry of the chromatin environment at regulatory elements. Genome Research. 22: 1735-47 |
Charos AE, Reed BD, Raha D, et al. (2012) A highly integrated and complex PPARGC1A transcription factor binding network in HepG2 cells. Genome Research. 22: 1668-79 |
Gerstein MB, Kundaje A, Hariharan M, et al. (2012) Architecture of the human regulatory network derived from ENCODE data. Nature. 489: 91-100 |
Li G, Ruan X, Auerbach RK, et al. (2012) Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation. Cell. 148: 84-98 |
Yin H, Sweeney S, Raha D, et al. (2011) A high-resolution whole-genome map of key chromatin modifications in the adult Drosophila melanogaster. Plos Genetics. 7: e1002380 |
Rozowsky J, Abyzov A, Wang J, et al. (2011) AlleleSeq: analysis of allele-specific expression and binding in a network framework. Molecular Systems Biology. 7: 522 |
Wontakal SN, Guo X, Will B, et al. (2011) A large gene network in immature erythroid cells is controlled by the myeloid and B cell transcriptional regulator PU.1. Plos Genetics. 7: e1001392 |