BaDoi N. Phan
Affiliations: | 2017-2025 | School of Medicine | University of Pittsburgh, Pittsburgh, PA, United States |
| 2019-2023 | Computational Biology | Carnegie Mellon University, Pittsburgh, PA |
Area:
neurogenomics, computational biologyGoogle:
"BaDoi Phan"Mean distance: (not calculated yet)
Parents
Sign in to add mentor| Brady J. Maher | research assistant | LIBD | |
| Andrew E. Jaffe | research assistant | 2015-2017 | Johns Hopkins University Schoolof Public Health (Epi Tree) |
| Andreas R. Pfenning | grad student | 2019-2023 | Carnegie Mellon |
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Publications
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| Wirthlin ME, Schmid TA, Elie JE, et al. (2024) Vocal learning-associated convergent evolution in mammalian proteins and regulatory elements. Science (New York, N.Y.). eabn3263 |
| Phan BN, Ray MH, Xue X, et al. (2024) Single nuclei transcriptomics in human and non-human primate striatum in opioid use disorder. Nature Communications. 15: 878 |
| Chen HY, Phan BN, Shim G, et al. (2023) Psychiatric risk gene Transcription Factor 4 (TCF4) regulates the density and connectivity of distinct inhibitory interneuron subtypes. Molecular Psychiatry |
| Kaplow IM, Lawler AJ, Schäffer DE, et al. (2023) Relating enhancer genetic variation across mammals to complex phenotypes using machine learning. Science (New York, N.Y.). 380: eabm7993 |
| Sullivan PF, Meadows JRS, Gazal S, et al. (2023) Leveraging base-pair mammalian constraint to understand genetic variation and human disease. Science (New York, N.Y.). 380: eabn2937 |
| Christmas MJ, Kaplow IM, Genereux DP, et al. (2023) Evolutionary constraint and innovation across hundreds of placental mammals. Science (New York, N.Y.). 380: eabn3943 |
| Sullivan PF, Meadows JRS, Gazal S, et al. (2023) Leveraging Base Pair Mammalian Constraint to Understand Genetic Variation and Human Disease. Biorxiv : the Preprint Server For Biology |
| Lawler AJ, Ramamurthy E, Brown AR, et al. (2022) Machine learning sequence prioritization for cell type-specific enhancer design. Elife. 11 |
| Xue X, Zong W, Glausier JR, et al. (2022) Molecular rhythm alterations in prefrontal cortex and nucleus accumbens associated with opioid use disorder. Translational Psychiatry. 12: 123 |
| Ramnauth AD, Maynard KR, Kardian AS, et al. (2022) Induction of Bdnf from promoter I following electroconvulsive seizures contributes to structural plasticity in neurons of the piriform cortex. Brain Stimulation |