Joerg Schaarschmidt
Affiliations: | 2016-2018 | Utrecht University, Utrecht, Netherlands |
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Publications
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| Morris C, Andreetto P, Banci L, et al. (2019) West-Life: A Virtual Research Environment for structural biology. Journal of Structural Biology: X. 1: 100006 |
| Koukos PI, Roel-Touris J, Ambrosetti F, et al. (2019) An overview of data-driven HADDOCK strategies in CAPRI rounds 38-45. Proteins |
| Lensink MF, Brysbaert G, Nadzirin N, et al. (2019) Blind prediction of homo- and hetero- protein complexes: The CASP13-CAPRI experiment. Proteins |
| Vangone A, Schaarschmidt J, Koukos P, et al. (2019) Large-scale prediction of binding affinity in protein-small ligand complexes: the PRODIGY-LIG web server. Bioinformatics (Oxford, England). 35: 1585-1587 |
| Schaarschmidt J, Monastyrskyy B, Kryshtafovych A, et al. (2017) Assessment of Contact Predictions in CASP12: Co-Evolution and Deep Learning Coming of Age. Proteins |
| Kurkcuoglu Z, Koukos PI, Citro N, et al. (2017) Performance of HADDOCK and a simple contact-based protein-ligand binding affinity predictor in the D3R Grand Challenge 2. Journal of Computer-Aided Molecular Design |
| Moreira IS, Koukos PI, Melo R, et al. (2017) SpotOn: High Accuracy Identification of Protein-Protein Interface Hot-Spots. Scientific Reports. 7: 8007 |
| Moreira IS, Koukos P, Melo R, et al. (2017) Spoton: A Machine-Learning Approach for Hot-Spot Determination Biophysical Journal. 112 |
| van Zundert GC, Trellet M, Schaarschmidt J, et al. (2016) The DisVis and PowerFit web servers: Explorative and Integrative Modeling of Biomolecular Complexes. Journal of Molecular Biology |
| Schaarschmidt J, Nagel MB, Huth S, et al. (2016) Rearrangement of the extracellular domain/extracellular loop 1 interface is critical for thyrotropin receptor activation. The Journal of Biological Chemistry |