Wojciech Rosikiewicz

Affiliations: 
2020- Center for Applied BioInformatics St. Jude Children's Research Hospital, San Francisco, CA, United States 
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Qi W, Rosikiewicz W, Yin Z, et al. (2022) Genomic profiling identifies genes and pathways dysregulated by HEY1-NCOA2 fusion and shines a light on mesenchymal chondrosarcoma tumorigenesis. The Journal of Pathology
Wang X, Rosikiewicz W, Sedkov Y, et al. (2022) PROSER1 mediates TET2 O-GlcNAcylation to regulate DNA demethylation on UTX-dependent enhancers and CpG islands. Life Science Alliance. 5
Liu Y, Rosikiewicz W, Pan Z, et al. (2021) DNA methylation-calling tools for Oxford Nanopore sequencing: a survey and human epigenome-wide evaluation. Genome Biology. 22: 295
Xu B, Wang H, Wright S, et al. (2021) Acute depletion of CTCF rewires genome-wide chromatin accessibility. Genome Biology. 22: 244
Djekidel MN, Rosikiewicz W, Peng JC, et al. (2021) CovidExpress: an interactive portal for intuitive investigation on SARS-CoV-2 related transcriptomes. Biorxiv : the Preprint Server For Biology
Rosikiewicz W, Chen X, Dominguez PM, et al. (2020) TET2 deficiency reprograms the germinal center B cell epigenome and silences genes linked to lymphomagenesis. Science Advances. 6: eaay5872
Ashoor H, Chen X, Rosikiewicz W, et al. (2020) Graph embedding and unsupervised learning predict genomic sub-compartments from HiC chromatin interaction data. Nature Communications. 11: 1173
Taghbalout A, Du M, Jillette N, et al. (2019) Enhanced CRISPR-based DNA demethylation by Casilio-ME-mediated RNA-guided coupling of methylcytosine oxidation and DNA repair pathways. Nature Communications. 10: 4296
Dominguez PM, Ghamlouch H, Rosikiewicz W, et al. (2018) TET2 deficiency causes germinal center hyperplasia, impairs plasma cell differentiation and promotes B-cell lymphomagenesis. Cancer Discovery
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