Julia Zeitlinger
Affiliations: | 2000-2007 | Whitehead Institute, Cambridge, MA, United States |
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| Rice G, Gaitan-Escudero T, Charles-Obi K, et al. (2024) Gene regulatory network co-option is sufficient to induce a morphological novelty in . Biorxiv : the Preprint Server For Biology |
| Maven BEJ, Gifford CA, Weilert M, et al. (2023) The multi-lineage transcription factor ISL1 controls cardiomyocyte cell fate through interaction with NKX2.5. Stem Cell Reports |
| Ramalingam V, Yu X, Slaughter BD, et al. (2023) Lola-I is a promoter pioneer factor that establishes de novo Pol II pausing during development. Nature Communications. 14: 5862 |
| Horton CA, Alexandari AM, Hayes MGB, et al. (2023) Short tandem repeats bind transcription factors to tune eukaryotic gene expression. Science (New York, N.Y.). 381: eadd1250 |
| Brennan KJ, Weilert M, Krueger S, et al. (2023) Chromatin accessibility in the Drosophila embryo is determined by transcription factor pioneering and enhancer activation. Developmental Cell |
| Alexandari AM, Horton CA, Shrikumar A, et al. (2023) distillation of thermodynamic affinity from deep learning regulatory sequence models of protein-DNA binding. Biorxiv : the Preprint Server For Biology |
| Nora EP, Aerts S, Wittkopp PJ, et al. (2023) Emerging questions in transcriptional regulation. Cell Systems. 14: 247-251 |
| Raicu AM, Fay JC, Rohner N, et al. (2022) Off the deep end: what can deep learning do for the gene expression field? The Journal of Biological Chemistry. 102760 |
| Soffers JHM, Alcantara SG, Li X, et al. (2021) The SAGA core module is critical during Drosophila oogenesis and is broadly recruited to promoters. Plos Genetics. 17: e1009668 |
| Avsec Ž, Weilert M, Shrikumar A, et al. (2021) Base-resolution models of transcription-factor binding reveal soft motif syntax. Nature Genetics |