Daniel H. O'Connor - Publications

Affiliations: 
Johns Hopkins University, Baltimore, MD 

41/183 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Zhang M, Kwon SE, Ben-Johny M, O'Connor DH, Issa JB. Spectral hallmark of auditory-tactile interactions in the mouse somatosensory cortex. Communications Biology. 3: 64. PMID 32047263 DOI: 10.1038/s42003-020-0788-5  0.68
2019 Severson KS, Xu D, Yang H, O'Connor DH. Coding of whisker motion across the mouse face. Elife. 8. PMID 30816844 DOI: 10.7554/eLife.41535  0.96
2018 Minamisawa G, Kwon SE, Chevée M, Brown SP, O'Connor DH. A Non-canonical Feedback Circuit for Rapid Interactions between Somatosensory Cortices. Cell Reports. 23: 2718-2731.e6. PMID 29847801 DOI: 10.1016/j.celrep.2018.04.115  0.68
2017 Kwon SE, Tsytsarev V, Erzurumlu RS, O'Connor DH. Organization of orientation-specific whisker deflection responses in layer 2/3 of mouse somatosensory cortex. Neuroscience. PMID 28827090 DOI: 10.1016/j.neuroscience.2017.07.067  0.68
2017 Severson KS, Xu D, Van de Loo M, Bai L, Ginty DD, O'Connor DH. Active Touch and Self-Motion Encoding by Merkel Cell-Associated Afferents. Neuron. PMID 28434802 DOI: 10.1016/j.neuron.2017.03.045  0.68
2017 Severson KS, O'Connor DH. Active Sensing: The Rat's Nose Dances in Step with Whiskers, Head, and Breath. Current Biology : Cb. 27: R183-R185. PMID 28267973 DOI: 10.1016/j.cub.2017.01.034  0.68
2016 Kwon SE, Yang H, Minamisawa G, O'Connor DH. Sensory and decision-related activity propagate in a cortical feedback loop during touch perception. Nature Neuroscience. PMID 27437910 DOI: 10.1038/nn.4356  1
2015 Yang H, Kwon SE, Severson KS, O'Connor DH. Origins of choice-related activity in mouse somatosensory cortex. Nature Neuroscience. PMID 26642088 DOI: 10.1038/nn.4183  0.68
2015 Andrew Hires S, Gutnisky DA, Yu J, O'Connor DH, Svoboda K. Low-noise encoding of active touch by layer 4 in the somatosensory cortex. Elife. 4. PMID 26245232 DOI: 10.7554/eLife.06619  0.88
2014 Yang H, O'Connor DH. Cortical adaptation and tactile perception. Nature Neuroscience. 17: 1434-6. PMID 25349906 DOI: 10.1038/nn.3847  1
2014 Kuhlman SJ, O'Connor DH, Fox K, Svoboda K. Structural plasticity within the barrel cortex during initial phases of whisker-dependent learning. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 34: 6078-83. PMID 24760867 DOI: 10.1523/JNEUROSCI.4919-12.2014  1
2014 Guo ZV, Hires SA, Li N, O'Connor DH, Komiyama T, Ophir E, Huber D, Bonardi C, Morandell K, Gutnisky D, Peron S, Xu NL, Cox J, Svoboda K. Procedures for behavioral experiments in head-fixed mice. Plos One. 9: e88678. PMID 24520413 DOI: 10.1371/journal.pone.0088678  1
2014 Guo ZV, Hires SA, Li N, O'Connor DH, Komiyama T. Procedures for Behavioral Experiments in Head-Fixed Mice (PLoS ONE (2014) 9, 2 (e88678) DOI:10.1371/journal.pone.0088678) Plos One. 9. DOI: 10.1371/journal.pone.0101397  0.88
2013 O'Connor DH, Hires SA, Guo ZV, Li N, Yu J, Sun QQ, Huber D, Svoboda K. Neural coding during active somatosensation revealed using illusory touch. Nature Neuroscience. 16: 958-65. PMID 23727820 DOI: 10.1038/nn.3419  1
2013 Pammer L, O'Connor DH, Hires SA, Clack NG, Huber D, Myers EW, Svoboda K. The mechanical variables underlying object localization along the axis of the whisker. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 6726-41. PMID 23595731 DOI: 10.1523/JNEUROSCI.4316-12.2013  1
2012 Xu NL, Harnett MT, Williams SR, Huber D, O'Connor DH, Svoboda K, Magee JC. Nonlinear dendritic integration of sensory and motor input during an active sensing task. Nature. 492: 247-51. PMID 23143335 DOI: 10.1038/nature11601  1
2012 Petreanu L, Gutnisky DA, Huber D, Xu NL, O'Connor DH, Tian L, Looger L, Svoboda K. Activity in motor-sensory projections reveals distributed coding in somatosensation. Nature. 489: 299-303. PMID 22922646 DOI: 10.1038/nature11321  1
2012 Civillico EF, Shoham S, O'Connor DH, Sarkisov DV, Wang SS. Preparing, handling, and applying caged compound solutions for acousto-optical deflector-based patterned uncaging with ultraviolet light. Cold Spring Harbor Protocols. 2012. PMID 22854575 DOI: 10.1101/pdb.prot070656  1
2012 Civillico EF, Shoham S, O'Connor DH, Sarkisov DV, Wang SS. Construction, alignment, and implementation of an acousto-optical deflector-based system for patterned uncaging with ultraviolet light. Cold Spring Harbor Protocols. 2012. PMID 22854574 DOI: 10.1101/pdb.prot070649  1
2012 Civillico EF, Shoham S, O'Connor DH, Sarkisov DV, Wang SS. Acousto-optical deflector-based patterned ultraviolet uncaging of neurotransmitter for the study of neuronal integration. Cold Spring Harbor Protocols. 2012. PMID 22854573 DOI: 10.1101/pdb.top070631  1
2012 Clack NG, O'Connor DH, Huber D, Petreanu L, Hires A, Peron S, Svoboda K, Myers EW. Automated tracking of whiskers in videos of head fixed rodents. Plos Computational Biology. 8: e1002591. PMID 22792058 DOI: 10.1371/journal.pcbi.1002591  1
2012 Huber D, Gutnisky DA, Peron S, O'Connor DH, Wiegert JS, Tian L, Oertner TG, Looger LL, Svoboda K. Multiple dynamic representations in the motor cortex during sensorimotor learning. Nature. 484: 473-8. PMID 22538608 DOI: 10.1038/nature11039  1
2010 O'Connor DH, Peron SP, Huber D, Svoboda K. Neural activity in barrel cortex underlying vibrissa-based object localization in mice. Neuron. 67: 1048-61. PMID 20869600 DOI: 10.1016/j.neuron.2010.08.026  1
2010 Komiyama T, Sato TR, O'Connor DH, Zhang YX, Huber D, Hooks BM, Gabitto M, Svoboda K. Learning-related fine-scale specificity imaged in motor cortex circuits of behaving mice. Nature. 464: 1182-6. PMID 20376005 DOI: 10.1038/nature08897  1
2010 O'Connor DH, Clack NG, Huber D, Komiyama T, Myers EW, Svoboda K. Vibrissa-based object localization in head-fixed mice. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 1947-67. PMID 20130203 DOI: 10.1523/JNEUROSCI.3762-09.2010  1
2009 O'Connor DH, Huber D, Svoboda K. Reverse engineering the mouse brain. Nature. 461: 923-9. PMID 19829372 DOI: 10.1038/nature08539  1
2008 Mao T, O'Connor DH, Scheuss V, Nakai J, Svoboda K. Characterization and subcellular targeting of GCaMP-type genetically-encoded calcium indicators. Plos One. 3: e1796. PMID 18350138 DOI: 10.1371/journal.pone.0001796  1
2007 O'Connor DH, Wittenberg GM, Wang SS. Timing and contributions of pre-synaptic and post-synaptic parameter changes during unitary plasticity events at CA3-CA1 synapses. Synapse (New York, N.Y.). 61: 664-78. PMID 17503487 DOI: 10.1002/syn.20403  1
2006 Shoham S, O'Connor DH, Segev R. How silent is the brain: is there a "dark matter" problem in neuroscience? Journal of Comparative Physiology. a, Neuroethology, Sensory, Neural, and Behavioral Physiology. 192: 777-84. PMID 16550391 DOI: 10.1007/s00359-006-0117-6  1
2005 Shoham S, O'Connor DH, Sarkisov DV, Wang SS. Rapid neurotransmitter uncaging in spatially defined patterns. Nature Methods. 2: 837-43. PMID 16278654 DOI: 10.1038/nmeth793  1
2005 Potter MC, Dell'Acqua R, Pesciarelli F, Job R, Peressotti F, O'Connor DH. Bidirectional semantic priming in the attentional blink. Psychonomic Bulletin & Review. 12: 460-5. PMID 16235629  1
2005 O'Connor DH, Wittenberg GM, Wang SS. Graded bidirectional synaptic plasticity is composed of switch-like unitary events. Proceedings of the National Academy of Sciences of the United States of America. 102: 9679-84. PMID 15983385 DOI: 10.1073/pnas.0502332102  1
2005 O'Connor DH, Wittenberg GM, Wang SS. Dissection of bidirectional synaptic plasticity into saturable unidirectional processes. Journal of Neurophysiology. 94: 1565-73. PMID 15800079 DOI: 10.1152/jn.00047.2005  1
2005 Kastner S, Schneider KA, O'Connor DH. Attentional modulation in the human lateral geniculate nucleus and pulvinar Neurobiology of Attention. 435-441. DOI: 10.1016/B978-012375731-9/50076-8  1
2004 Potter MC, Staub A, O'Connor DH, Potter MC. Pictorial and conceptual representation of glimpsed pictures. Journal of Experimental Psychology. Human Perception and Performance. 30: 478-89. PMID 15161380 DOI: 10.1037/0096-1523.30.3.478  1
2004 Kastner S, O'Connor DH, Fukui MM, Fehd HM, Herwig U, Pinsk MA. Functional imaging of the human lateral geniculate nucleus and pulvinar. Journal of Neurophysiology. 91: 438-48. PMID 13679404 DOI: 10.1152/jn.00553.2003  1
2004 Wang SSH, Shoham S, O'Connor DH. Multiphoton optical approaches to understanding brain function Microscopy and Microanalysis. 10: 1464-1465. DOI: 10.1017/S1431927604880413  1
2002 Potter MC, Staub A, Rado J, O'Connor DH. Recognition memory for briefly presented pictures: the time course of rapid forgetting. Journal of Experimental Psychology. Human Perception and Performance. 28: 1163-75. PMID 12421062 DOI: 10.1037//0096-1523.28.5.1163  1
2002 Potter MC, Staub A, O'Connor DH. The time course of competition for attention: attention is initially labile. Journal of Experimental Psychology. Human Perception and Performance. 28: 1149-62. PMID 12421061 DOI: 10.1037//0096-1523.28.5.1149  1
2002 O'Connor DH, Fukui MM, Pinsk MA, Kastner S. Attention modulates responses in the human lateral geniculate nucleus. Nature Neuroscience. 5: 1203-9. PMID 12379861 DOI: 10.1038/nn957  1
2002 Potter MC, O'Connor DH, Oliva A. Remembering rooms but not viewpoints Journal of Vision. 2: 516a. DOI: 10.1167/2.7.516  1
Low-probability matches
2015 Bailey AL, Lauck M, Sibley SD, Friedrich TC, Kuhn JH, Freimer NB, Jasinska AJ, Phillips-Conroy JE, Jolly CJ, Marx PA, Apetrei C, Rogers J, Goldberg TL, O'Connor DH. Zoonotic Potential of Simian Arteriviruses. Journal of Virology. PMID 26559828 DOI: 10.1128/JVI.01433-15  0.24
2015 Mothé BR, Lindestam Arlehamn CS, Dow C, Dillon MB, Wiseman RW, Bohn P, Karl J, Golden NA, Gilpin T, Foreman TW, Rodgers MA, Mehra S, Scriba TJ, Flynn JL, Kaushal D, et al. The TB-specific CD4(+) T cell immune repertoire in both cynomolgus and rhesus macaques largely overlap with humans. Tuberculosis (Edinburgh, Scotland). PMID 26526557 DOI: 10.1016/j.tube.2015.07.005  0.24
2015 Bialas KM, Tanaka T, Tran D, Varner V, Cisneros De La Rosa E, Chiuppesi F, Wussow F, Kattenhorn L, Macri S, Kunz EL, Estroff JA, Kirchherr J, Yue Y, Fan Q, Lauck M, et al. Maternal CD4+ T cells protect against severe congenital cytomegalovirus disease in a novel nonhuman primate model of placental cytomegalovirus transmission. Proceedings of the National Academy of Sciences of the United States of America. 112: 13645-50. PMID 26483473 DOI: 10.1073/pnas.1511526112  0.24
2015 Bailey AL, Lauck M, Mohns M, Peterson EJ, Beheler K, Brunner KG, Crosno K, Mejia A, Mutschler J, Gehrke M, Greene J, Ericsen AJ, Weiler A, Lehrer-Brey G, Friedrich TC, et al. Durable sequence stability and bone marrow tropism in a macaque model of human pegivirus infection. Science Translational Medicine. 7: 305ra144. PMID 26378244 DOI: 10.1126/scitranslmed.aab3467  0.24
2015 Warren WC, Jasinska AJ, Garcia-Perez R, Svardal H, Tomlinson C, Rocchi M, Archidiacono N, Capozzi O, Minx P, Montague MJ, Kyung K, Hillier LW, Kremitzki M, Graves T, Chiang C, et al. The genome of the vervet (Chlorocebus aethiops sabaeus). Genome Research. PMID 26377836 DOI: 10.1101/gr.192922.115  0.24
2015 Breed MW, Elser SE, Torben W, Jordan AP, Aye PP, Midkiff C, Schiro F, Sugimoto C, Alvarez-Hernandez X, Blair RV, Somasunderam A, Utay NS, Kuroda MJ, Pahar B, Wiseman RW, et al. Elite Control, Gut CD4 T Cell Sparing, and Enhanced Mucosal T Cell Responses in Macaca nemestrina Infected by a Simian Immunodeficiency Virus Lacking a gp41 Trafficking Motif. Journal of Virology. 89: 10156-75. PMID 26223646 DOI: 10.1128/JVI.01134-15  0.24
2015 Mohns MS, Greene JM, Cain BT, Pham NH, Gostick E, Price DA, O'Connor DH. Expansion of SIV-specific CD8 T cell lines from SIV-naïve Mauritian cynomolgus macaques for adoptive transfer. Journal of Virology. PMID 26178985 DOI: 10.1128/JVI.00993-15  0.24
2015 Correll M, Bailey AL, Sarikaya A, O'Connor DH, Gleicher M. LayerCake: a tool for the visual comparison of viral deep sequencing data. Bioinformatics (Oxford, England). 31: 3522-8. PMID 26153515 DOI: 10.1093/bioinformatics/btv407  0.24
2015 Westbrook CJ, Karl JA, Wiseman RW, Mate S, Koroleva G, Garcia K, Sanchez-Lockhart M, O'Connor DH, Palacios G. No assembly required: Full-length MHC class I allele discovery by PacBio circular consensus sequencing. Human Immunology. PMID 26028281 DOI: 10.1016/j.humimm.2015.03.022  0.24
2014 Dudley DM, Bailey AL, Mehta SH, Hughes AL, Kirk GD, Westergaard RP, O'Connor DH. Cross-clade simultaneous HIV drug resistance genotyping for reverse transcriptase, protease, and integrase inhibitor mutations by Illumina MiSeq. Retrovirology. 11: 122. PMID 25533166 DOI: 10.1186/s12977-014-0122-8  0.24
2014 Ericsen AJ, Starrett GJ, Greene JM, Lauck M, Raveendran M, Deiros DR, Mohns MS, Vince N, Cain BT, Pham NH, Weinfurter JT, Bailey AL, Budde ML, Wiseman RW, Gibbs R, et al. Whole genome sequencing of SIV-infected macaques identifies candidate loci that may contribute to host control of virus replication. Genome Biology. 15: 478. PMID 25418588 DOI: 10.1186/s13059-014-0478-z  0.24
2014 Gooneratne SL, Alinejad-Rokny H, Ebrahimi D, Bohn PS, Wiseman RW, O'Connor DH, Davenport MP, Kent SJ. Linking pig-tailed macaque major histocompatibility complex class I haplotypes and cytotoxic T lymphocyte escape mutations in simian immunodeficiency virus infection. Journal of Virology. 88: 14310-25. PMID 25275134 DOI: 10.1128/JVI.02428-14  0.24
2014 Bailey AL, Lauck M, Sibley SD, Pecotte J, Rice K, Weny G, Tumukunde A, Hyeroba D, Greene J, Correll M, Gleicher M, Friedrich TC, Jahrling PB, Kuhn JH, Goldberg TL, et al. Two novel simian arteriviruses in captive and wild baboons (Papio spp.). Journal of Virology. 88: 13231-9. PMID 25187550 DOI: 10.1128/JVI.02203-14  0.24
2014 Greene JM, Weiler AM, Reynolds MR, Cain BT, Pham NH, Ericsen AJ, Peterson EJ, Crosno K, Brunner K, Friedrich TC, O'Connor DH. Rapid, repeated, low-dose challenges with SIVmac239 infect animals in a condensed challenge window. Retrovirology. 11: 66. PMID 25125288 DOI: 10.1186/s12977-014-0066-z  0.24
2014 Lauck M, Switzer WM, Sibley SD, Hyeroba D, Tumukunde A, Weny G, Shankar A, Greene JM, Ericsen AJ, Zheng H, Ting N, Chapman CA, Friedrich TC, Goldberg TL, O'Connor DH. Discovery and full genome characterization of a new SIV lineage infecting red-tailed guenons (Cercopithecus ascanius schmidti) in Kibale National Park, Uganda. Retrovirology. 11: 55. PMID 24996566 DOI: 10.1186/1742-4690-11-55  0.24
2014 Sibley SD, Lauck M, Bailey AL, Hyeroba D, Tumukunde A, Weny G, Chapman CA, O'Connor DH, Goldberg TL, Friedrich TC. Discovery and characterization of distinct simian pegiviruses in three wild African Old World monkey species. Plos One. 9: e98569. PMID 24918769 DOI: 10.1371/journal.pone.0098569  0.24
2014 Bailey AL, Lauck M, Weiler A, Sibley SD, Dinis JM, Bergman Z, Nelson CW, Correll M, Gleicher M, Hyeroba D, Tumukunde A, Weny G, Chapman C, Kuhn JH, Hughes AL, et al. High genetic diversity and adaptive potential of two simian hemorrhagic fever viruses in a wild primate population. Plos One. 9: e90714. PMID 24651479 DOI: 10.1371/journal.pone.0090714  0.24
2014 Schafer JL, Colantonio AD, Neidermyer WJ, Dudley DM, Connole M, O'Connor DH, Evans DT. KIR3DL01 recognition of Bw4 ligands in the rhesus macaque: maintenance of Bw4 specificity since the divergence of apes and Old World monkeys. Journal of Immunology (Baltimore, Md. : 1950). 192: 1907-17. PMID 24453246 DOI: 10.4049/jimmunol.1302883  0.24
2014 Goldberg TL, Gendron-Fitzpatrick A, Deering KM, Wallace RS, Clyde VL, Lauck M, Rosen GE, Bennett AJ, Greiner EC, O'Connor DH. Fatal metacestode infection in Bornean orangutan caused by unknown Versteria species. Emerging Infectious Diseases. 20: 109-13. PMID 24377497 DOI: 10.3201/eid2001.131191  0.24
2014 Burwitz BJ, Wu HL, Reed JS, Hammond KB, Newman LP, Bimber BN, Nimiyongskul FA, Leon EJ, Maness NJ, Friedrich TC, Yokoyama M, Sato H, Matano T, O'Connor DH, Sacha JB. Tertiary mutations stabilize CD8+ T lymphocyte escape-associated compensatory mutations following transmission of simian immunodeficiency virus. Journal of Virology. 88: 3598-604. PMID 24371068 DOI: 10.1128/JVI.03304-13  0.24
2014 Dudley DM, Karl JA, Creager HM, Bohn PS, Wiseman RW, O'Connor DH. Full-length novel MHC class I allele discovery by next-generation sequencing: two platforms are better than one. Immunogenetics. 66: 15-24. PMID 24241691 DOI: 10.1007/s00251-013-0744-3  0.24
2013 Wiseman RW, Karl JA, Bohn PS, Nimityongskul FA, Starrett GJ, O'Connor DH. Haplessly hoping: macaque major histocompatibility complex made easy. Ilar Journal / National Research Council, Institute of Laboratory Animal Resources. 54: 196-210. PMID 24174442 DOI: 10.1093/ilar/ilt036  0.24
2013 Cain BT, Pham NH, Budde ML, Greene JM, Weinfurter JT, Scarlotta M, Harris M, Chin E, O'Connor SL, Friedrich TC, O'Connor DH. T cell response specificity and magnitude against SIVmac239 are not concordant in major histocompatibility complex-matched animals. Retrovirology. 10: 116. PMID 24156675 DOI: 10.1186/1742-4690-10-116  0.24
2013 Wilker PR, Dinis JM, Starrett G, Imai M, Hatta M, Nelson CW, O'Connor DH, Hughes AL, Neumann G, Kawaoka Y, Friedrich TC. Selection on haemagglutinin imposes a bottleneck during mammalian transmission of reassortant H5N1 influenza viruses. Nature Communications. 4: 2636. PMID 24149915 DOI: 10.1038/ncomms3636  0.24
2013 Lauck M, Switzer WM, Sibley SD, Hyeroba D, Tumukunde A, Weny G, Taylor B, Shankar A, Ting N, Chapman CA, Friedrich TC, Goldberg TL, O'Connor DH. Discovery and full genome characterization of two highly divergent simian immunodeficiency viruses infecting black-and-white colobus monkeys (Colobus guereza) in Kibale National Park, Uganda. Retrovirology. 10: 107. PMID 24139306 DOI: 10.1186/1742-4690-10-107  0.24
2013 Silveira EL, Fogg MH, Leskowitz RM, Ertl HC, Wiseman RW, O'Connor DH, Lieberman P, Wang F, Villinger F. Therapeutic vaccination against the rhesus lymphocryptovirus EBNA-1 homologue, rhEBNA-1, elicits T cell responses to novel epitopes in rhesus macaques. Journal of Virology. 87: 13904-10. PMID 24089556 DOI: 10.1128/JVI.01947-13  0.24
2013 Ghai RR, Sibley SD, Lauck M, Dinis JM, Bailey AL, Chapman CA, Omeja P, Friedrich TC, O'Connor DH, Goldberg TL. Deep sequencing identifies two genotypes and high viral genetic diversity of human pegivirus (GB virus C) in rural Ugandan patients. The Journal of General Virology. 94: 2670-8. PMID 24077364 DOI: 10.1099/vir.0.055509-0  0.24
2013 Lauck M, Sibley SD, Lara J, Purdy MA, Khudyakov Y, Hyeroba D, Tumukunde A, Weny G, Switzer WM, Chapman CA, Hughes AL, Friedrich TC, O'Connor DH, Goldberg TL. A novel hepacivirus with an unusually long and intrinsically disordered NS5A protein in a wild Old World primate. Journal of Virology. 87: 8971-81. PMID 23740998 DOI: 10.1128/JVI.00888-13  0.24
2013 Karl JA, Bohn PS, Wiseman RW, Nimityongskul FA, Lank SM, Starrett GJ, O'Connor DH. Major histocompatibility complex class I haplotype diversity in Chinese rhesus macaques. G3 (Bethesda, Md.). 3: 1195-201. PMID 23696100 DOI: 10.1534/g3.113.006254  0.24
2013 Walsh AD, Bimber BN, Das A, Piaskowski SM, Rakasz EG, Bean AT, Mudd PA, Ericsen AJ, Wilson NA, Hughes AL, O'Connor DH, Maness NJ. Acute phase CD8+ T lymphocytes against alternate reading frame epitopes select for rapid viral escape during SIV infection. Plos One. 8: e61383. PMID 23671565 DOI: 10.1371/journal.pone.0061383  0.24
2013 Greene JM, Lhost JJ, Hines PJ, Scarlotta M, Harris M, Burwitz BJ, Budde ML, Dudley DM, Pham N, Cain B, Mac Nair CE, Weiker MK, O'Connor SL, Friedrich TC, O'Connor DH. Adoptive transfer of lymphocytes isolated from simian immunodeficiency virus SIVmac239Δnef-vaccinated macaques does not affect acute-phase viral loads but may reduce chronic-phase viral loads in major histocompatibility complex-matched recipients. Journal of Virology. 87: 7382-92. PMID 23616658 DOI: 10.1128/JVI.00348-13  0.24
2013 Thurber MI, Ghai RR, Hyeroba D, Weny G, Tumukunde A, Chapman CA, Wiseman RW, Dinis J, Steeil J, Greiner EC, Friedrich TC, O'Connor DH, Goldberg TL. Co-infection and cross-species transmission of divergent Hepatocystis lineages in a wild African primate community. International Journal For Parasitology. 43: 613-9. PMID 23603520 DOI: 10.1016/j.ijpara.2013.03.002  0.24
2013 Del Prete GQ, Scarlotta M, Newman L, Reid C, Parodi LM, Roser JD, Oswald K, Marx PA, Miller CJ, Desrosiers RC, Barouch DH, Pal R, Piatak M, Chertova E, Giavedoni LD, et al. Comparative characterization of transfection- and infection-derived simian immunodeficiency virus challenge stocks for in vivo nonhuman primate studies. Journal of Virology. 87: 4584-95. PMID 23408608 DOI: 10.1128/JVI.03507-12  0.24
2013 Lauck M, Sibley SD, Hyeroba D, Tumukunde A, Weny G, Chapman CA, Ting N, Switzer WM, Kuhn JH, Friedrich TC, O'Connor DH, Goldberg TL. Exceptional simian hemorrhagic fever virus diversity in a wild African primate community. Journal of Virology. 87: 688-91. PMID 23077302 DOI: 10.1128/JVI.02433-12  0.24
2012 Hughes AL, Becker EA, Lauck M, Karl JA, Braasch AT, O'Connor DH, O'Connor SL. SIV genome-wide pyrosequencing provides a comprehensive and unbiased view of variation within and outside CD8 T lymphocyte epitopes. Plos One. 7: e47818. PMID 23112852 DOI: 10.1371/journal.pone.0047818  0.24
2012 Greene JM, Chin EN, Budde ML, Lhost JJ, Hines PJ, Burwitz BJ, Broman KW, Nelson JE, Friedrich TC, O'Connor DH. Ex vivo SIV-specific CD8 T cell responses in heterozygous animals are primarily directed against peptides presented by a single MHC haplotype. Plos One. 7: e43690. PMID 22928016 DOI: 10.1371/journal.pone.0043690  0.24
2012 Lank SM, Golbach BA, Creager HM, Wiseman RW, Keskin DB, Reinherz EL, Brusic V, O'Connor DH. Ultra-high resolution HLA genotyping and allele discovery by highly multiplexed cDNA amplicon pyrosequencing. Bmc Genomics. 13: 378. PMID 22866951 DOI: 10.1186/1471-2164-13-378  0.24
2012 Dudley DM, Chin EN, Bimber BN, Sanabani SS, Tarosso LF, Costa PR, Sauer MM, Kallas EG, O'Connor DH. Low-cost ultra-wide genotyping using Roche/454 pyrosequencing for surveillance of HIV drug resistance. Plos One. 7: e36494. PMID 22574170 DOI: 10.1371/journal.pone.0036494  0.24
2012 Budde ML, Greene JM, Chin EN, Ericsen AJ, Scarlotta M, Cain BT, Pham NH, Becker EA, Harris M, Weinfurter JT, O'Connor SL, Piatak M, Lifson JD, Gostick E, Price DA, et al. Specific CD8+ T cell responses correlate with control of simian immunodeficiency virus replication in Mauritian cynomolgus macaques. Journal of Virology. 86: 7596-604. PMID 22573864 DOI: 10.1128/JVI.00716-12  0.24
2012 de Groot NG, Otting N, Robinson J, Blancher A, Lafont BA, Marsh SG, O'Connor DH, Shiina T, Walter L, Watkins DI, Bontrop RE. Nomenclature report on the major histocompatibility complex genes and alleles of Great Ape, Old and New World monkey species. Immunogenetics. 64: 615-31. PMID 22526602 DOI: 10.1007/s00251-012-0617-1  0.24
2012 Mudd PA, Ericsen AJ, Burwitz BJ, Wilson NA, O'Connor DH, Hughes AL, Watkins DI. Escape from CD8(+) T cell responses in Mamu-B*00801(+) macaques differentiates progressors from elite controllers. Journal of Immunology (Baltimore, Md. : 1950). 188: 3364-70. PMID 22387557 DOI: 10.4049/jimmunol.1102470  0.24
2012 Lauck M, Alvarado-Mora MV, Becker EA, Bhattacharya D, Striker R, Hughes AL, Carrilho FJ, O'Connor DH, Pinho JR. Analysis of hepatitis C virus intrahost diversity across the coding region by ultradeep pyrosequencing. Journal of Virology. 86: 3952-60. PMID 22278255 DOI: 10.1128/JVI.06627-11  0.24
2012 Johnson ZP, Eady RD, Ahmad SF, Agravat S, Morris T, Else J, Lank SM, Wiseman RW, O'Connor DH, Penedo MC, Larsen CP, Kean LS. Immunogenetic Management Software: a new tool for visualization and analysis of complex immunogenetic datasets. Immunogenetics. 64: 329-36. PMID 22080300 DOI: 10.1007/s00251-011-0587-8  0.24
2012 O'Connor SL, Becker EA, Weinfurter JT, Chin EN, Budde ML, Gostick E, Correll M, Gleicher M, Hughes AL, Price DA, Friedrich TC, O'Connor DH. Conditional CD8+ T cell escape during acute simian immunodeficiency virus infection. Journal of Virology. 86: 605-9. PMID 22013056 DOI: 10.1128/JVI.05511-11  0.24
2012 Lang Kuhs KA, Ginsberg AA, Yan J, Wiseman RW, Khan AS, Sardesai NY, O'Connor DH, Weiner DB. Hepatitis C virus NS3/NS4A DNA vaccine induces multiepitope T cell responses in rhesus macaques mimicking human immune responses [corrected]. Molecular Therapy : the Journal of the American Society of Gene Therapy. 20: 669-78. PMID 21952169 DOI: 10.1038/mt.2011.188  0.24
2011 Keskin DB, Reinhold B, Lee SY, Zhang G, Lank S, O'Connor DH, Berkowitz RS, Brusic V, Kim SJ, Reinherz EL. Direct identification of an HPV-16 tumor antigen from cervical cancer biopsy specimens. Frontiers in Immunology. 2: 75. PMID 22566864 DOI: 10.3389/fimmu.2011.00075  0.24
2011 Burwitz BJ, Sacha JB, Reed JS, Newman LP, Norante FA, Bimber BN, Wilson NA, Watkins DI, O'Connor DH. Pyrosequencing reveals restricted patterns of CD8+ T cell escape-associated compensatory mutations in simian immunodeficiency virus. Journal of Virology. 85: 13088-96. PMID 21994463 DOI: 10.1128/JVI.05650-11  0.24
2011 Nadazdin O, Boskovic S, Wee SL, Sogawa H, Koyama I, Colvin RB, Smith RN, Tocco G, O'Connor DH, Karl JA, Madsen JC, Sachs DH, Kawai T, Cosimi AB, Benichou G. Contributions of direct and indirect alloresponses to chronic rejection of kidney allografts in nonhuman primates. Journal of Immunology (Baltimore, Md. : 1950). 187: 4589-97. PMID 21957140 DOI: 10.4049/jimmunol.1003253  0.24
2011 Vojnov L, Martins MA, Almeida JR, Ende Z, Rakasz EG, Reynolds MR, Leon EJ, Weisgrau KL, Burwitz BJ, Folkvord JM, de Santana MG, Neves PC, Connick E, Skinner PJ, Gostick E, et al. GagCM9-specific CD8+ T cells expressing limited public TCR clonotypes do not suppress SIV replication in vivo. Plos One. 6: e23515. PMID 21887264 DOI: 10.1371/journal.pone.0023515  0.24
2011 Greene JM, Wiseman RW, Lank SM, Bimber BN, Karl JA, Burwitz BJ, Lhost JJ, Hawkins OE, Kunstman KJ, Broman KW, Wolinsky SM, Hildebrand WH, O'Connor DH. Differential MHC class I expression in distinct leukocyte subsets. Bmc Immunology. 12: 39. PMID 21762519 DOI: 10.1186/1471-2172-12-39  0.24
2011 Reed JS, Sidney J, Piaskowski SM, Glidden CE, León EJ, Burwitz BJ, Kolar HL, Eernisse CM, Furlott JR, Maness NJ, Walsh AD, Rudersdorf RA, Bardet W, McMurtrey CP, O'Connor DH, et al. The role of MHC class I allele Mamu-A*07 during SIV(mac)239 infection. Immunogenetics. 63: 789-807. PMID 21732180 DOI: 10.1007/s00251-011-0541-9  0.24
2011 Belisle SE, Yin J, Shedlock DJ, Dai A, Yan J, Hirao L, Kutzler MA, Lewis MG, Andersen H, Lank SM, Karl JA, O'Connor DH, Khan A, Sardesai N, Chang J, et al. Long-term programming of antigen-specific immunity from gene expression signatures in the PBMC of rhesus macaques immunized with an SIV DNA vaccine. Plos One. 6: e19681. PMID 21701683 DOI: 10.1371/journal.pone.0019681  0.24
2011 Moreland AJ, Guethlein LA, Reeves RK, Broman KW, Johnson RP, Parham P, O'Connor DH, Bimber BN. Characterization of killer immunoglobulin-like receptor genetics and comprehensive genotyping by pyrosequencing in rhesus macaques. Bmc Genomics. 12: 295. PMID 21645414 DOI: 10.1186/1471-2164-12-295  0.24
2011 Creager HM, Becker EA, Sandman KK, Karl JA, Lank SM, Bimber BN, Wiseman RW, Hughes AL, O'Connor SL, O'Connor DH. Characterization of full-length MHC class II sequences in Indonesian and Vietnamese cynomolgus macaques. Immunogenetics. 63: 611-8. PMID 21614582 DOI: 10.1007/s00251-011-0537-5  0.24
2011 Fernandez CS, Reece JC, Saepuloh U, De Rose R, Ishkandriati D, O'Connor DH, Wiseman RW, Kent SJ. Screening and confirmatory testing of MHC class I alleles in pig-tailed macaques. Immunogenetics. 63: 511-21. PMID 21556859 DOI: 10.1007/s00251-011-0529-5  0.24
2011 Lauck M, Hyeroba D, Tumukunde A, Weny G, Lank SM, Chapman CA, O'Connor DH, Friedrich TC, Goldberg TL. Novel, divergent simian hemorrhagic fever viruses in a wild Ugandan red colobus monkey discovered using direct pyrosequencing. Plos One. 6: e19056. PMID 21544192 DOI: 10.1371/journal.pone.0019056  0.24
2011 Colantonio AD, Bimber BN, Neidermyer WJ, Reeves RK, Alter G, Altfeld M, Johnson RP, Carrington M, O'Connor DH, Evans DT. KIR polymorphisms modulate peptide-dependent binding to an MHC class I ligand with a Bw6 motif. Plos Pathogens. 7: e1001316. PMID 21423672 DOI: 10.1371/journal.ppat.1001316  0.24
2011 Budde ML, Lhost JJ, Burwitz BJ, Becker EA, Burns CM, O'Connor SL, Karl JA, Wiseman RW, Bimber BN, Zhang GL, Hildebrand W, Brusic V, O'Connor DH. Transcriptionally abundant major histocompatibility complex class I alleles are fundamental to nonhuman primate simian immunodeficiency virus-specific CD8+ T cell responses. Journal of Virology. 85: 3250-61. PMID 21270169 DOI: 10.1128/JVI.02355-10  0.24
2011 Burwitz BJ, Ende Z, Sudolcan B, Reynolds MR, Greene JM, Bimber BN, Almeida JR, Kurniawan M, Venturi V, Gostick E, Wiseman RW, Douek DC, Price DA, O'Connor DH. Simian immunodeficiency virus SIVmac239Deltanef vaccination elicits different Tat28-35SL8-specific CD8+ T-cell clonotypes compared to a DNA prime/adenovirus type 5 boost regimen in rhesus macaques. Journal of Virology. 85: 3683-9. PMID 21270159 DOI: 10.1128/JVI.02112-10  0.24
2011 Zhang GL, O'Connor DH, Budde ML, Hildebrand WH, Lhost JJ, Brusic V. PRED mafa: A system for prediction of peptide binding to several MHC class i molecules in cynomolgus macaques 2011 Acm Conference On Bioinformatics, Computational Biology and Biomedicine, Bcb 2011. 602-606. DOI: 10.1145/2147805.2147908  0.24
2010 Budde ML, Wiseman RW, Karl JA, Hanczaruk B, Simen BB, O'Connor DH. Characterization of Mauritian cynomolgus macaque major histocompatibility complex class I haplotypes by high-resolution pyrosequencing. Immunogenetics. 62: 773-80. PMID 20882385 DOI: 10.1007/s00251-010-0481-9  0.24
2010 Bimber BN, Dudley DM, Lauck M, Becker EA, Chin EN, Lank SM, Grunenwald HL, Caruccio NC, Maffitt M, Wilson NA, Reed JS, Sosman JM, Tarosso LF, Sanabani S, Kallas EG, et al. Whole-genome characterization of human and simian immunodeficiency virus intrahost diversity by ultradeep pyrosequencing. Journal of Virology. 84: 12087-92. PMID 20844037 DOI: 10.1128/JVI.01378-10  0.24
2010 Yamada S, Hatta M, Staker BL, Watanabe S, Imai M, Shinya K, Sakai-Tagawa Y, Ito M, Ozawa M, Watanabe T, Sakabe S, Li C, Kim JH, Myler PJ, Phan I, et al. Biological and structural characterization of a host-adapting amino acid in influenza virus. Plos Pathogens. 6: e1001034. PMID 20700447 DOI: 10.1371/journal.ppat.1001034  0.24
2010 Lank SM, Wiseman RW, Dudley DM, O'Connor DH. A novel single cDNA amplicon pyrosequencing method for high-throughput, cost-effective sequence-based HLA class I genotyping. Human Immunology. 71: 1011-7. PMID 20650293 DOI: 10.1016/j.humimm.2010.07.012  0.24
2010 Berman DM, Willman MA, Han D, Kleiner G, Kenyon NM, Cabrera O, Karl JA, Wiseman RW, O'Connor DH, Bartholomew AM, Kenyon NS. Mesenchymal stem cells enhance allogeneic islet engraftment in nonhuman primates. Diabetes. 59: 2558-68. PMID 20622174 DOI: 10.2337/db10-0136  0.24
2010 Nadazdin O, Boskovic S, Murakami T, O'Connor DH, Wiseman RW, Karl JA, Tuscher JJ, Sachs DH, Madsen JC, Tocco G, Kawai T, Cosimi AB, Benichou G. Phenotype, distribution and alloreactive properties of memory T cells from cynomolgus monkeys. American Journal of Transplantation : Official Journal of the American Society of Transplantation and the American Society of Transplant Surgeons. 10: 1375-84. PMID 20486921 DOI: 10.1111/j.1600-6143.2010.03119.x  0.24
2010 O'Connor SL, Lhost JJ, Becker EA, Detmer AM, Johnson RC, Macnair CE, Wiseman RW, Karl JA, Greene JM, Burwitz BJ, Bimber BN, Lank SM, Tuscher JJ, Mee ET, Rose NJ, et al. MHC heterozygote advantage in simian immunodeficiency virus-infected Mauritian cynomolgus macaques. Science Translational Medicine. 2: 22ra18. PMID 20375000 DOI: 10.1126/scitranslmed.3000524  0.24
2010 Greene JM, Lhost JJ, Burwitz BJ, Budde ML, Macnair CE, Weiker MK, Gostick E, Friedrich TC, Broman KW, Price DA, O'Connor SL, O'Connor DH. Extralymphoid CD8+ T cells resident in tissue from simian immunodeficiency virus SIVmac239{Delta}nef-vaccinated macaques suppress SIVmac239 replication ex vivo. Journal of Virology. 84: 3362-72. PMID 20089651 DOI: 10.1128/JVI.02028-09  0.24
2010 Casimiro DR, Cox K, Tang A, Sykes KJ, Feng M, Wang F, Bett A, Schleif WA, Liang X, Flynn J, Tobery TW, Wilson K, Finnefrock A, Huang L, Vitelli S, et al. Efficacy of multivalent adenovirus-based vaccine against simian immunodeficiency virus challenge. Journal of Virology. 84: 2996-3003. PMID 20042509 DOI: 10.1128/JVI.00969-09  0.24
2009 Kanthaswamy S, Capitanio JP, Dubay CJ, Ferguson B, Folks T, Ha JC, Hotchkiss CE, Johnson ZP, Katze MG, Kean LS, Kubisch HM, Lank S, Lyons LA, Miller GM, Nylander J, et al. Resources for genetic management and genomics research on non-human primates at the National Primate Research Centers (NPRCs). Journal of Medical Primatology. 38: 17-23. PMID 19863674 DOI: 10.1111/j.1600-0684.2009.00371.x  0.24
2009 Wiseman RW, Karl JA, Bimber BN, O'Leary CE, Lank SM, Tuscher JJ, Detmer AM, Bouffard P, Levenkova N, Turcotte CL, Szekeres E, Wright C, Harkins T, O'Connor DH. Major histocompatibility complex genotyping with massively parallel pyrosequencing. Nature Medicine. 15: 1322-6. PMID 19820716 DOI: 10.1038/nm.2038  0.24
2009 O'Leary CE, Wiseman RW, Karl JA, Bimber BN, Lank SM, Tuscher JJ, O'Connor DH. Identification of novel MHC class I sequences in pig-tailed macaques by amplicon pyrosequencing and full-length cDNA cloning and sequencing. Immunogenetics. 61: 689-701. PMID 19777225 DOI: 10.1007/s00251-009-0397-4  0.24
2009 Valentine LE, Loffredo JT, Bean AT, León EJ, MacNair CE, Beal DR, Piaskowski SM, Klimentidis YC, Lank SM, Wiseman RW, Weinfurter JT, May GE, Rakasz EG, Wilson NA, Friedrich TC, et al. Infection with "escaped" virus variants impairs control of simian immunodeficiency virus SIVmac239 replication in Mamu-B*08-positive macaques. Journal of Virology. 83: 11514-27. PMID 19726517 DOI: 10.1128/JVI.01298-09  0.24
2009 Bimber BN, Chugh P, Giorgi EE, Kim B, Almudevar AL, Dewhurst S, O'Connor DH, Lee HY. Nef gene evolution from a single transmitted strain in acute SIV infection. Retrovirology. 6: 57. PMID 19505314 DOI: 10.1186/1742-4690-6-57  0.24
2009 Karl JA, Wiseman RW, O'Connor DH. Cost-effective sequence-based nonhuman primate MHC class I genotyping from RNA. Methods (San Diego, Calif.). 49: 11-7. PMID 19442739 DOI: 10.1016/j.ymeth.2009.05.002  0.24
2009 Burwitz BJ, Pendley CJ, Greene JM, Detmer AM, Lhost JJ, Karl JA, Piaskowski SM, Rudersdorf RA, Wallace LT, Bimber BN, Loffredo JT, Cox DG, Bardet W, Hildebrand W, Wiseman RW, et al. Mauritian cynomolgus macaques share two exceptionally common major histocompatibility complex class I alleles that restrict simian immunodeficiency virus-specific CD8+ T cells. Journal of Virology. 83: 6011-9. PMID 19339351 DOI: 10.1128/JVI.00199-09  0.24
2009 Burwitz BJ, Greene JM, O'Connor DH. Pirate primates in uncharted waters: lymphocyte transfers in unrelated, MHC-matched macaques. Current Hiv Research. 7: 51-6. PMID 19149554 DOI: 10.2174/157016209787048492  0.24
2009 Campbell KJ, Detmer AM, Karl JA, Wiseman RW, Blasky AJ, Hughes AL, Bimber BN, O'Connor SL, O'Connor DH. Characterization of 47 MHC class I sequences in Filipino cynomolgus macaques. Immunogenetics. 61: 177-87. PMID 19107381 DOI: 10.1007/s00251-008-0351-x  0.24
2009 Mee ET, Badhan A, Karl JA, Wiseman RW, Cutler K, Knapp LA, Almond N, O'Connor DH, Rose NJ. MHC haplotype frequencies in a UK breeding colony of Mauritian cynomolgus macaques mirror those found in a distinct population from the same geographic origin. Journal of Medical Primatology. 38: 1-14. PMID 19018947 DOI: 10.1111/j.1600-0684.2008.00299.x  0.24
2009 Greene JM, Lhost JJ, Burwitz BJ, O'Connor SL, O'Connor DH. P16-46. CD8+ T cells from nonlymphoid tissues exhibit superior control of SIV replication Retrovirology. 6: P275. DOI: 10.1186/1742-4690-6-S3-P275  0.24
2008 Bimber BN, Moreland AJ, Wiseman RW, Hughes AL, O'Connor DH. Complete characterization of killer Ig-like receptor (KIR) haplotypes in Mauritian cynomolgus macaques: novel insights into nonhuman primate KIR gene content and organization. Journal of Immunology (Baltimore, Md. : 1950). 181: 6301-8. PMID 18941221  0.24
2008 Blasky AJ, Karl JA, Wiseman RW, Read DS, O'Connor DH. Rapid high-resolution MHC class I genotyping of Chinese rhesus macaques by capillary reference strand-mediated conformational analysis. Immunogenetics. 60: 575-84. PMID 18629489 DOI: 10.1007/s00251-008-0315-1  0.24
2008 Greene JM, Burwitz BJ, Blasky AJ, Mattila TL, Hong JJ, Rakasz EG, Wiseman RW, Hasenkrug KJ, Skinner PJ, O'Connor SL, O'Connor DH. Allogeneic lymphocytes persist and traffic in feral MHC-matched mauritian cynomolgus macaques. Plos One. 3: e2384. PMID 18545705 DOI: 10.1371/journal.pone.0002384  0.24
2008 Pendley CJ, Becker EA, Karl JA, Blasky AJ, Wiseman RW, Hughes AL, O'Connor SL, O'Connor DH. MHC class I characterization of Indonesian cynomolgus macaques. Immunogenetics. 60: 339-51. PMID 18504574 DOI: 10.1007/s00251-008-0292-4  0.24
2008 Florese RH, Wiseman RW, Venzon D, Karl JA, Demberg T, Larsen K, Flanary L, Kalyanaraman VS, Pal R, Titti F, Patterson LJ, Heath MJ, O'Connor DH, Cafaro A, Ensoli B, et al. Comparative study of Tat vaccine regimens in Mauritian cynomolgus and Indian rhesus macaques: influence of Mauritian MHC haplotypes on susceptibility/resistance to SHIV(89.6P) infection. Vaccine. 26: 3312-21. PMID 18486283 DOI: 10.1016/j.vaccine.2008.03.100  0.24
2008 Karl JA, Wiseman RW, Campbell KJ, Blasky AJ, Hughes AL, Ferguson B, Read DS, O'Connor DH. Identification of MHC class I sequences in Chinese-origin rhesus macaques. Immunogenetics. 60: 37-46. PMID 18097659 DOI: 10.1007/s00251-007-0267-x  0.24
2008 Bimber B, O'Connor DH. KIRigami: the case for studying NK cell receptors in SIV+ macaques. Immunologic Research. 40: 235-43. PMID 17989940 DOI: 10.1007/s12026-007-8010-0  0.24
2007 O'Connor SL, Blasky AJ, Pendley CJ, Becker EA, Wiseman RW, Karl JA, Hughes AL, O'Connor DH. Comprehensive characterization of MHC class II haplotypes in Mauritian cynomolgus macaques. Immunogenetics. 59: 449-62. PMID 17384942 DOI: 10.1007/s00251-007-0209-7  0.24
2007 Wojcechowskyj JA, Yant LJ, Wiseman RW, O'Connor SL, O'Connor DH. Control of simian immunodeficiency virus SIVmac239 is not predicted by inheritance of Mamu-B*17-containing haplotypes. Journal of Virology. 81: 406-10. PMID 17079280 DOI: 10.1128/JVI.01636-06  0.24
2007 Wiseman RW, Wojcechowskyj JA, Greene JM, Blasky AJ, Gopon T, Soma T, Friedrich TC, O'Connor SL, O'Connor DH. Simian immunodeficiency virus SIVmac239 infection of major histocompatibility complex-identical cynomolgus macaques from Mauritius. Journal of Virology. 81: 349-61. PMID 17035320 DOI: 10.1128/JVI.01841-06  0.24
2007 Wiseman RW, O'Connor DH. Major histocompatibility complex-defined macaques in transplantation research Transplantation Reviews. 21: 17-25. DOI: 10.1016/j.trre.2007.01.001  0.24
2006 Pratt BF, O'Connor DH, Lafont BA, Mankowski JL, Fernandez CS, Triastuti R, Brooks AG, Kent SJ, Smith MZ. MHC class I allele frequencies in pigtail macaques of diverse origin. Immunogenetics. 58: 995-1001. PMID 17096100 DOI: 10.1007/s00251-006-0164-8  0.24
2006 Wilson NA, Reed J, Napoe GS, Piaskowski S, Szymanski A, Furlott J, Gonzalez EJ, Yant LJ, Maness NJ, May GE, Soma T, Reynolds MR, Rakasz E, Rudersdorf R, McDermott AB, et al. Vaccine-induced cellular immune responses reduce plasma viral concentrations after repeated low-dose challenge with pathogenic simian immunodeficiency virus SIVmac239. Journal of Virology. 80: 5875-85. PMID 16731926 DOI: 10.1128/JVI.00171-06  0.24
2006 Yant LJ, Friedrich TC, Johnson RC, May GE, Maness NJ, Enz AM, Lifson JD, O'Connor DH, Carrington M, Watkins DI. The high-frequency major histocompatibility complex class I allele Mamu-B*17 is associated with control of simian immunodeficiency virus SIVmac239 replication. Journal of Virology. 80: 5074-7. PMID 16641299 DOI: 10.1128/JVI.80.10.5074-5077.2006  0.24
2006 O'Connor DH, Burton DR. Immune responses and HIV: a little order from the chaos. The Journal of Experimental Medicine. 203: 501-3. PMID 16533889 DOI: 10.1084/jem.20060216  0.24
2005 McDermott AB, O'Connor DH, Fuenger S, Piaskowski S, Martin S, Loffredo J, Reynolds M, Reed J, Furlott J, Jacoby T, Riek C, Dodds E, Krebs K, Davies ME, Schleif WA, et al. Cytotoxic T-lymphocyte escape does not always explain the transient control of simian immunodeficiency virus SIVmac239 viremia in adenovirus-boosted and DNA-primed Mamu-A*01-positive rhesus macaques. Journal of Virology. 79: 15556-66. PMID 16306626 DOI: 10.1128/JVI.79.24.15556-15566.2005  0.24
2005 Casimiro DR, Wang F, Schleif WA, Liang X, Zhang ZQ, Tobery TW, Davies ME, McDermott AB, O'Connor DH, Fridman A, Bagchi A, Tussey LG, Bett AJ, Finnefrock AC, Fu TM, et al. Attenuation of simian immunodeficiency virus SIVmac239 infection by prophylactic immunization with dna and recombinant adenoviral vaccine vectors expressing Gag. Journal of Virology. 79: 15547-55. PMID 16306625 DOI: 10.1128/JVI.79.24.15547-15555.2005  0.24
2005 Hughes AL, Piontkivska H, Krebs KC, O'Connor DH, Watkins DI. Within-host evolution of CD8+-TL epitopes encoded by overlapping and non-overlapping reading frames of simian immunodeficiency virus. Bioinformatics (Oxford, England). 21: iii39-44. PMID 16306391 DOI: 10.1093/bioinformatics/bti1203  0.24
2005 Loffredo JT, Sidney J, Piaskowski S, Szymanski A, Furlott J, Rudersdorf R, Reed J, Peters B, Hickman-Miller HD, Bardet W, Rehrauer WM, O'Connor DH, Wilson NA, Hildebrand WH, Sette A, et al. The high frequency Indian rhesus macaque MHC class I molecule, Mamu-B*01, does not appear to be involved in CD8+ T lymphocyte responses to SIVmac239. Journal of Immunology (Baltimore, Md. : 1950). 175: 5986-97. PMID 16237093  0.24
2005 Krebs KC, Jin Z, Rudersdorf R, Hughes AL, O'Connor DH. Unusually high frequency MHC class I alleles in Mauritian origin cynomolgus macaques. Journal of Immunology (Baltimore, Md. : 1950). 175: 5230-9. PMID 16210628  0.24
2005 Smith MZ, Fernandez CS, Chung A, Dale CJ, De Rose R, Lin J, Brooks AG, Krebs KC, Watkins DI, O'Connor DH, Davenport MP, Kent SJ. The pigtail macaque MHC class I allele Mane-A*10 presents an immundominant SIV Gag epitope: identification, tetramer development and implications of immune escape and reversion. Journal of Medical Primatology. 34: 282-93. PMID 16128923 DOI: 10.1111/j.1600-0684.2005.00126.x  0.24
2005 Fernandez CS, Stratov I, De Rose R, Walsh K, Dale CJ, Smith MZ, Agy MB, Hu SL, Krebs K, Watkins DI, O'connor DH, Davenport MP, Kent SJ. Rapid viral escape at an immunodominant simian-human immunodeficiency virus cytotoxic T-lymphocyte epitope exacts a dramatic fitness cost. Journal of Virology. 79: 5721-31. PMID 15827187 DOI: 10.1128/JVI.79.9.5721-5731.2005  0.24
2005 Smith MZ, Dale CJ, De Rose R, Stratov I, Fernandez CS, Brooks AG, Weinfurter J, Krebs K, Riek C, Watkins DI, O'connor DH, Kent SJ. Analysis of pigtail macaque major histocompatibility complex class I molecules presenting immunodominant simian immunodeficiency virus epitopes. Journal of Virology. 79: 684-95. PMID 15613296 DOI: 10.1128/JVI.79.2.684-695.2005  0.24
2004 O'Connor DH, McDermott AB, Krebs KC, Dodds EJ, Miller JE, Gonzalez EJ, Jacoby TJ, Yant L, Piontkivska H, Pantophlet R, Burton DR, Rehrauer WM, Wilson N, Hughes AL, Watkins DI. A dominant role for CD8+-T-lymphocyte selection in simian immunodeficiency virus sequence variation. Journal of Virology. 78: 14012-22. PMID 15564508 DOI: 10.1128/JVI.78.24.14012-14022.2004  0.24
2004 Loffredo JT, Sidney J, Wojewoda C, Dodds E, Reynolds MR, Napoé G, Mothé BR, O'Connor DH, Wilson NA, Watkins DI, Sette A. Identification of seventeen new simian immunodeficiency virus-derived CD8+ T cell epitopes restricted by the high frequency molecule, Mamu-A*02, and potential escape from CTL recognition. Journal of Immunology (Baltimore, Md. : 1950). 173: 5064-76. PMID 15470050  0.24
2004 Friedrich TC, McDermott AB, Reynolds MR, Piaskowski S, Fuenger S, De Souza IP, Rudersdorf R, Cullen C, Yant LJ, Vojnov L, Stephany J, Martin S, O'Connor DH, Wilson N, Watkins DI. Consequences of cytotoxic T-lymphocyte escape: common escape mutations in simian immunodeficiency virus are poorly recognized in naive hosts. Journal of Virology. 78: 10064-73. PMID 15331739 DOI: 10.1128/JVI.78.18.10064-10073.2004  0.24
2004 Matano T, Kobayashi M, Igarashi H, Takeda A, Nakamura H, Kano M, Sugimoto C, Mori K, Iida A, Hirata T, Hasegawa M, Yuasa T, Miyazawa M, Takahashi Y, Yasunami M, et al. Cytotoxic T lymphocyte-based control of simian immunodeficiency virus replication in a preclinical AIDS vaccine trial. The Journal of Experimental Medicine. 199: 1709-18. PMID 15210746 DOI: 10.1084/jem.20040432  0.24
2004 Friedrich TC, Dodds EJ, Yant LJ, Vojnov L, Rudersdorf R, Cullen C, Evans DT, Desrosiers RC, Mothé BR, Sidney J, Sette A, Kunstman K, Wolinsky S, Piatak M, Lifson J, et al. Reversion of CTL escape-variant immunodeficiency viruses in vivo. Nature Medicine. 10: 275-81. PMID 14966520 DOI: 10.1038/nm998  0.24
2004 Friedrich TC, Frye CA, Yant LJ, O'Connor DH, Kriewaldt NA, Benson M, Vojnov L, Dodds EJ, Cullen C, Rudersdorf R, Hughes AL, Wilson N, Watkins DI. Extraepitopic compensatory substitutions partially restore fitness to simian immunodeficiency virus variants that escape from an immunodominant cytotoxic-T-lymphocyte response. Journal of Virology. 78: 2581-5. PMID 14963161 DOI: 10.1128/JVI.78.5.2581-2585.2004  0.24
2003 O'Connor DH, Mothe BR, Weinfurter JT, Fuenger S, Rehrauer WM, Jing P, Rudersdorf RR, Liebl ME, Krebs K, Vasquez J, Dodds E, Loffredo J, Martin S, McDermott AB, Allen TM, et al. Major histocompatibility complex class I alleles associated with slow simian immunodeficiency virus disease progression bind epitopes recognized by dominant acute-phase cytotoxic-T-lymphocyte responses. Journal of Virology. 77: 9029-40. PMID 12885919 DOI: 10.1128/JVI.77.16.9029-9040.2003  0.24
2002 Altfeld M, Allen TM, Yu XG, Johnston MN, Agrawal D, Korber BT, Montefiori DC, O'Connor DH, Davis BT, Lee PK, Maier EL, Harlow J, Goulder PJ, Brander C, Rosenberg ES, et al. HIV-1 superinfection despite broad CD8+ T-cell responses containing replication of the primary virus. Nature. 420: 434-9. PMID 12459786 DOI: 10.1038/nature01200  0.24
2002 O'Connor DH, Allen TM, Watkins DI. Cytotoxic T-lymphocyte escape monitoring in simian immunodeficiency virus vaccine challenge studies. Dna and Cell Biology. 21: 659-64. PMID 12396608 DOI: 10.1089/104454902760330192  0.24
2002 Vogel TU, Friedrich TC, O'Connor DH, Rehrauer W, Dodds EJ, Hickman H, Hildebrand W, Sidney J, Sette A, Hughes A, Horton H, Vielhuber K, Rudersdorf R, De Souza IP, Reynolds MR, et al. Escape in one of two cytotoxic T-lymphocyte epitopes bound by a high-frequency major histocompatibility complex class I molecule, Mamu-A*02: a paradigm for virus evolution and persistence? Journal of Virology. 76: 11623-36. PMID 12388723 DOI: 10.1128/JVI.76.22.11623-11636.2002  0.24
2002 Vogel TU, Horton H, Fuller DH, Carter DK, Vielhuber K, O'Connor DH, Shipley T, Fuller J, Sutter G, Erfle V, Wilson N, Picker LJ, Watkins DI. Differences between T cell epitopes recognized after immunization and after infection. Journal of Immunology (Baltimore, Md. : 1950). 169: 4511-21. PMID 12370388  0.24
2002 Allen TM, Jing P, Calore B, Horton H, O'Connor DH, Hanke T, Piekarczyk M, Ruddersdorf R, Mothé BR, Emerson C, Wilson N, Lifson JD, Belyakov IM, Berzofsky JA, Wang C, et al. Effects of cytotoxic T lymphocytes (CTL) directed against a single simian immunodeficiency virus (SIV) Gag CTL epitope on the course of SIVmac239 infection. Journal of Virology. 76: 10507-11. PMID 12239328 DOI: 10.1128/JVI.76.20.10507-10511.2002  0.24
2002 O'Connor DH, Allen TM, Vogel TU, Jing P, DeSouza IP, Dodds E, Dunphy EJ, Melsaether C, Mothé B, Yamamoto H, Horton H, Wilson N, Hughes AL, Watkins DI. Acute phase cytotoxic T lymphocyte escape is a hallmark of simian immunodeficiency virus infection. Nature Medicine. 8: 493-9. PMID 11984594 DOI: 10.1038/nm0502-493  0.24
2002 Allen TM, Mortara L, Mothé BR, Liebl M, Jing P, Calore B, Piekarczyk M, Ruddersdorf R, O'Connor DH, Wang X, Wang C, Allison DB, Altman JD, Sette A, Desrosiers RC, et al. Tat-vaccinated macaques do not control simian immunodeficiency virus SIVmac239 replication. Journal of Virology. 76: 4108-12. PMID 11907251 DOI: 10.1128/JVI.76.8.4108-4112.2002  0.24
2001 Hughes AL, Westover K, da Silva J, O'Connor DH, Watkins DI. Simultaneous positive and purifying selection on overlapping reading frames of the tat and vpr genes of simian immunodeficiency virus. Journal of Virology. 75: 7966-72. PMID 11483741 DOI: 10.1128/JVI.75.17.7966-7972.2001  0.24
2001 Allen TM, Mothé BR, Sidney J, Jing P, Dzuris JL, Liebl ME, Vogel TU, O'Connor DH, Wang X, Wussow MC, Thomson JA, Altman JD, Watkins DI, Sette A. CD8(+) lymphocytes from simian immunodeficiency virus-infected rhesus macaques recognize 14 different epitopes bound by the major histocompatibility complex class I molecule mamu-A*01: implications for vaccine design and testing. Journal of Virology. 75: 738-49. PMID 11134287 DOI: 10.1128/JVI.75.2.738-749.2001  0.24
2000 Allen TM, O'Connor DH, Jing P, Dzuris JL, Mothé BR, Vogel TU, Dunphy E, Liebl ME, Emerson C, Wilson N, Kunstman KJ, Wang X, Allison DB, Hughes AL, Desrosiers RC, et al. Tat-specific cytotoxic T lymphocytes select for SIV escape variants during resolution of primary viraemia. Nature. 407: 386-90. PMID 11014195 DOI: 10.1038/35030124  0.24
2000 Evans DT, Jing P, Allen TM, O'Connor DH, Horton H, Venham JE, Piekarczyk M, Dzuris J, Dykhuzen M, Mitchen J, Rudersdorf RA, Pauza CD, Sette A, Bontrop RE, DeMars R, et al. Definition of five new simian immunodeficiency virus cytotoxic T-lymphocyte epitopes and their restricting major histocompatibility complex class I molecules: evidence for an influence on disease progression. Journal of Virology. 74: 7400-10. PMID 10906193 DOI: 10.1128/JVI.74.16.7400-7410.2000  0.24
1999 O'Connor DH, Watkins DI. Houdini's box: towards an understanding of AIDS virus escape from the cytotoxic T-lymphocyte response. Immunogenetics. 50: 237-41. PMID 10602884  0.24
1999 Evans DT, O'Connor DH, Jing P, Dzuris JL, Sidney J, da Silva J, Allen TM, Horton H, Venham JE, Rudersdorf RA, Vogel T, Pauza CD, Bontrop RE, DeMars R, Sette A, et al. Virus-specific cytotoxic T-lymphocyte responses select for amino-acid variation in simian immunodeficiency virus Env and Nef. Nature Medicine. 5: 1270-6. PMID 10545993 DOI: 10.1038/15224  0.24
1999 Vogel TU, Evans DT, Urvater JA, O'Connor DH, Hughes AL, Watkins DI. Major histocompatibility complex class I genes in primates: co-evolution with pathogens. Immunological Reviews. 167: 327-37. PMID 10319271  0.24
1988 Welsch CW, DeHoog JV, O'Connor DH. Influence of caffeine and/or coffee consumption on the initiation and promotion phases of 7,12-dimethylbenz(a)anthracene-induced rat mammary gland tumorigenesis. Cancer Research. 48: 2068-73. PMID 3127044  0.01
2015 Lauck M, Alkhovsky SV, Bào Y, Bailey AL, Shevtsova ZV, Shchetinin AM, Vishnevskaya TV, Lackemeyer MG, Postnikova E, Mazur S, Wada J, Radoshitzky SR, Friedrich TC, Lapin BA, Deriabin PG, et al. Historical Outbreaks of Simian Hemorrhagic Fever in Captive Macaques Were Caused by Distinct Arteriviruses. Journal of Virology. 89: 8082-7. PMID 25972539 DOI: 10.1128/JVI.01046-15  0.08
2015 Caì Y, Postnikova EN, Bernbaum JG, Yú SQ, Mazur S, Deiuliis NM, Radoshitzky SR, Lackemeyer MG, McCluskey A, Robinson PJ, Haucke V, Wahl-Jensen V, Bailey AL, Lauck M, Friedrich TC, et al. Simian hemorrhagic fever virus cell entry is dependent on CD163 and uses a clathrin-mediated endocytosis-like pathway. Journal of Virology. 89: 844-56. PMID 25355889 DOI: 10.1128/JVI.02697-14  0.08
2010 Budde ML, Lhost JJ, Dudley DM, Rakasz EG, O'Connor DH. Integrin alpha4beta7 is downregulated on the surfaces of simian immunodeficiency virus SIVmac239-infected cells. Journal of Virology. 84: 6344-51. PMID 20410278 DOI: 10.1128/JVI.00430-10  0.01
2015 Kuhn JH, Lauck M, Bailey AL, Shchetinin AM, Vishnevskaya TV, Bào Y, Ng TF, LeBreton M, Schneider BS, Gillis A, Tamoufe U, Diffo JL, Takuo JM, Kondov NO, Coffey LL, et al. Reorganization and expansion of the nidoviral family Arteriviridae. Archives of Virology. PMID 26608064 DOI: 10.1007/s00705-015-2672-z  0.04
2015 Heimbruch KE, Karl JA, Wiseman RW, Dudley DM, Johnson Z, Kaur A, O'Connor DH. Novel MHC class I full-length allele and haplotype characterization in sooty mangabeys. Immunogenetics. PMID 26009014 DOI: 10.1007/s00251-015-0847-0  0.04
2015 Lauck M, Yú SQ, Caì Y, Hensley LE, Chiu CY, O'Connor DH, Kuhn JH. Genome Sequence of Bivens Arm Virus, a Tibrovirus Belonging to the Species Tibrogargan virus (Mononegavirales: Rhabdoviridae). Genome Announcements. 3. PMID 25792044 DOI: 10.1128/genomeA.00089-15  0.04
2014 Lauck M, Palacios G, Wiley MR, L Y, F?ng Y, Lackemeyer MG, Caì Y, Bailey AL, Postnikova E, Radoshitzky SR, Johnson RF, Alkhovsky SV, Deriabin PG, Friedrich TC, Goldberg TL, et al. Genome Sequences of Simian Hemorrhagic Fever Virus Variant NIH LVR42-0/M6941 Isolates (Arteriviridae: Arterivirus). Genome Announcements. 2. PMID 25301647 DOI: 10.1128/genomeA.00978-14  0.01
2014 Karl JA, Heimbruch KE, Vriezen CE, Mironczuk CJ, Dudley DM, Wiseman RW, O'Connor DH. Survey of major histocompatibility complex class II diversity in pig-tailed macaques. Immunogenetics. 66: 613-23. PMID 25129472 DOI: 10.1007/s00251-014-0797-y  0.04
2010 Pereyra F, Jia X, McLaren PJ, Telenti A, de Bakker PI, Walker BD, Ripke S, Brumme CJ, Pulit SL, Carrington M, Kadie CM, Carlson JM, Heckerman D, Graham RR, et al. The major genetic determinants of HIV-1 control affect HLA class I peptide presentation. Science (New York, N.Y.). 330: 1551-7. PMID 21051598 DOI: 10.1126/science.1195271  0.01
1988 Welsch CW, DeHoog JV, O'Connor DH. Influence of caffeine consumption on carcinomatous and normal mammary gland development in mice. Cancer Research. 48: 2078-82. PMID 3127046  0.01
1985 Welsch CW, DeHoog JV, O'Connor DH, Sheffield LG. Influence of dietary fat levels on development and hormone responsiveness of the mouse mammary gland. Cancer Research. 45: 6147-54. PMID 4063968  0.01
2018 Finkel EA, O'Connor DH. Learning Recruits Higher Cortical Areas into Rapid Sensorimotor Streams. Neuron. 97: 1-2. PMID 29301096 DOI: 10.1016/j.neuron.2017.12.026  0.01
2015 Lauck M, Bailey AL, Andersen KG, Goldberg TL, Sabeti PC, O'Connor DH. GB virus C coinfections in west African Ebola patients. Journal of Virology. 89: 2425-9. PMID 25473056 DOI: 10.1128/JVI.02752-14  0.01
1989 Welsch CW, O'Connor DH. Influence of the type of dietary fat on developmental growth of the mammary gland in immature and mature female BALB/c mice. Cancer Research. 49: 5999-6007. PMID 2790814  0.01
1987 Welsch CW, O'Connor DH, Aylsworth CF, Sheffield LG. Normal but not carcinomatous primary rat mammary epithelium: readily transplanted to and maintained in the athymic nude mouse. Journal of the National Cancer Institute. 78: 557-65. PMID 3102827  0.01
1975 Grissom FE, Kahn JS. Glyceraldehyde-3-phosphate dehydrogenases from Euglena gracilis. Purification and physical and chemical characterization Archives of Biochemistry and Biophysics. 171: 444-458. PMID 960 DOI: 10.1016/0003-9861(75)90053-3  0.01
1975 Eckardt R, Carstens E, Fiedler W. Attempts to synthesize new β1 receptor blockers Pharmazie. 30: 633-637. PMID 686  0.01
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