June Hoan Kim, Ph.D. - Related publications

2020- National Institutes of Health, Bethesda, MD, United States 
neuronal networks
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Bostock MP, Prasad AR, Chaouni R, Yuen AC, Sousa-Nunes R, Amoyel M, Fernandes VM. An Immobilization Technique for Long-Term Time-Lapse Imaging of Explanted Tissues. Frontiers in Cell and Developmental Biology. 8: 590094. PMID 33117817 DOI: 10.3389/fcell.2020.590094   
2020 Meng Q, Xu T, Smith ZJ, Chu K. Optical volumetric projection with large NA objectives for fast high-resolution 3D imaging of neural signals. Biomedical Optics Express. 11: 3769-3782. PMID 33014565 DOI: 10.1364/BOE.393494   
2020 O'Connor T, Hawxhurst C, Shor LM, Javidi B. Red blood cell classification in lensless single random phase encoding using convolutional neural networks. Optics Express. 28: 33504-33515. PMID 33115011 DOI: 10.1364/OE.405563   
2020 Yang B, Lee PY, Hua Y, Brazile B, Waxman S, Ji F, Zhu Z, Sigal IA. Instant polarized light microscopy for imaging collagen microarchitecture and dynamics. Journal of Biophotonics. e202000326. PMID 33103363 DOI: 10.1002/jbio.202000326   
2020 Chen X, Luo P, Hu C, Yan S, Lu D, Li Y, Chu K, Smith ZJ. Nanometer precise red blood cell sizing using a cost-effective quantitative dark field imaging system. Biomedical Optics Express. 11: 5950-5966. PMID 33149998 DOI: 10.1364/BOE.405510   
2020 Tehrani AKZ, Amiri M, Rivaz H. Real-time and High Quality Ultrasound Elastography Using Convolutional Neural Network by Incorporating Analytic Signal. Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual International Conference. 2020: 2075-2078. PMID 33018414 DOI: 10.1109/EMBC44109.2020.9176025   
2020 Rabut C, Yoo S, Hurt RC, Jin Z, Li H, Guo H, Ling B, Shapiro MG. Ultrasound Technologies for Imaging and Modulating Neural Activity. Neuron. 108: 93-110. PMID 33058769 DOI: 10.1016/j.neuron.2020.09.003   
2020 Pham K, Noimark S, Huynh N, Zhang E, Kuklis F, Jaros J, Desjardins A, Cox B, Beard P. Broadband all-optical plane-wave ultrasound imaging system based on a Fabry-Perot scanner. Ieee Transactions On Ultrasonics, Ferroelectrics, and Frequency Control. PMID 33035154 DOI: 10.1109/TUFFC.2020.3028749   
2020 Yamami S, Sugimoto K, Takahashi M, Nakano M. Recursive Additive Complement Networks for Cell Membrane Segmentation in Histological Images. Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual International Conference. 2020: 1392-1395. PMID 33018249 DOI: 10.1109/EMBC44109.2020.9176126   
2020 Jafari CZ, Sullender CT, Miller DR, Mihelic SA, Dunn AK. Effect of vascular structure on laser speckle contrast imaging. Biomedical Optics Express. 11: 5826-5841. PMID 33149989 DOI: 10.1364/BOE.401235   
2020 Frohn J, Pinkert-Leetsch D, Missbach-Güntner J, Reichardt M, Osterhoff M, Alves F, Salditt T. 3D virtual histology of human pancreatic tissue by multiscale phase-contrast X-ray tomography. Journal of Synchrotron Radiation. 27: 1707-1719. PMID 33147198 DOI: 10.1107/S1600577520011327   
2020 Ning K, Zhang X, Gao X, Jiang T, Wang H, Chen S, Li A, Yuan J. Deep-learning-based whole-brain imaging at single-neuron resolution. Biomedical Optics Express. 11: 3567-3584. PMID 33014552 DOI: 10.1364/BOE.393081   
2020 Sen R, Zhdanov AV, Bastiaanssen TFS, Hirvonen LM, Svihra P, Fitzgerald P, Cryan JF, Andersson-Engels S, Nomerotski A, Papkovsky DB. Mapping O concentration in ex-vivo tissue samples on a fast PLIM macro-imager. Scientific Reports. 10: 19006. PMID 33149165 DOI: 10.1038/s41598-020-75928-3   
2020 Guo R, Pan Z, Taibi A, Shepherd J, Menon R. 3D computational cannula fluorescence microscopy enabled by artificial neural networks. Optics Express. 28: 32342-32348. PMID 33114922 DOI: 10.1364/OE.403238   
2020 Park K, Kim JH, Kong T, Sun W, Lee J, Yang TD, Choi Y. Label-free microendoscopy using a micro-needle imaging probe for deep tissue imaging. Biomedical Optics Express. 11: 4976-4988. PMID 33014594 DOI: 10.1364/BOE.399428   
2020 Brunner C, Grillet M, Sans-Dublanc A, Farrow K, Lambert T, Macé E, Montaldo G, Urban A. A Platform for Brain-wide Volumetric Functional Ultrasound Imaging and Analysis of Circuit Dynamics in Awake Mice. Neuron. PMID 33080230 DOI: 10.1016/j.neuron.2020.09.020   
2020 Scarpelli ML, Healey DR, Mehta S, Kodibagkar VD, Quarles CC. A practical method for multimodal registration and assessment of whole-brain disease burden using PET, MRI, and optical imaging. Scientific Reports. 10: 17324. PMID 33057180 DOI: 10.1038/s41598-020-74459-1   
2020 Xiao L, Fang C, Zhu L, Wang Y, Yu T, Zhao Y, Zhu D, Fei P. Deep learning-enabled efficient image restoration for 3D microscopy of turbid biological specimens. Optics Express. 28: 30234-30247. PMID 33114907 DOI: 10.1364/OE.399542   
2020 Ochoa M, Rudkouskaya A, Yao R, Yan P, Barroso M, Intes X. High compression deep learning based single-pixel hyperspectral macroscopic fluorescence lifetime imaging . Biomedical Optics Express. 11: 5401-5424. PMID 33149959 DOI: 10.1364/BOE.396771   
2020 Longo E, Sancey L, Flenner S, Kubec A, Bonnin A, David C, Müller M, Greving I. X-ray Zernike phase contrast tomography: 3D ROI visualization of mm-sized mice organ tissues down to sub-cellular components. Biomedical Optics Express. 11: 5506-5517. PMID 33149967 DOI: 10.1364/BOE.396695   
2020 Mendonça Gomes JM, Charlie-Silva I, Santos AK, Rezende RR, Gomes JAS, Teixeira-Carvalho A, Corrêa Junior JD. An imaging flow cytometry-based technique to quantify erythrocyte nuclear alterations. Aquatic Toxicology (Amsterdam, Netherlands). 228: 105649. PMID 33035768 DOI: 10.1016/j.aquatox.2020.105649   
2020 Shrestha B, Stojkova K, Yi R, Anastasio MA, Ye JY, Brey EM. Gold nanorods enable noninvasive longitudinal monitoring of hydrogels in vivo with photoacoustic tomography. Acta Biomaterialia. PMID 33010515 DOI: 10.1016/j.actbio.2020.09.048   
2020 Wang Y, Zhong H, Jiang D, Lan H, Zhang J, Yaxin M, Gao F, Gao F. Frequency-domain Dual-contrast Photoacoustic Imaging with Chirp Modulation. Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual International Conference. 2020: 1911-1914. PMID 33018375 DOI: 10.1109/EMBC44109.2020.9175740   
2020 Sacco S, Caverzasi E, Papinutto N, Cordano C, Bischof A, Gundel T, Cheng S, Asteggiano C, Kirkish G, Mallot J, Stern WA, Bastianello S, Bove RM, Gelfand JM, Goodin DS, ... , et al. Neurite Orientation Dispersion and Density Imaging for Assessing Acute Inflammation and Lesion Evolution in MS. Ajnr. American Journal of Neuroradiology. PMID 33154077 DOI: 10.3174/ajnr.A6862   
2020 Yin W, Brittain D, Borseth J, Scott ME, Williams D, Perkins J, Own CS, Murfitt M, Torres RM, Kapner D, Mahalingam G, Bleckert A, Castelli D, Reid D, Lee WA, et al. A petascale automated imaging pipeline for mapping neuronal circuits with high-throughput transmission electron microscopy. Nature Communications. 11: 4949. PMID 33009388 DOI: 10.1038/s41467-020-18659-3   
2020 Moreaux LC, Yatsenko D, Sacher WD, Choi J, Lee C, Kubat NJ, Cotton RJ, Boyden ES, Lin MZ, Tian L, Tolias AS, Poon JKS, Shepard KL, Roukes ML. Integrated Neurophotonics: Toward Dense Volumetric Interrogation of Brain Circuit Activity-at Depth and in Real Time. Neuron. 108: 66-92. PMID 33058767 DOI: 10.1016/j.neuron.2020.09.043   
2020 Toth V, Jayaprakash N, Abbas A, Khan A, Zanos S, Zanos TP. Single-axon level automatic segmentation and feature extraction from immuhistochemical images of peripheral nerves. Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual International Conference. 2020: 1859-1862. PMID 33018362 DOI: 10.1109/EMBC44109.2020.9175974   
2020 Fast A, Lal A, Durkin AF, Lentsch G, Harris RM, Zachary CB, Ganesan AK, Balu M. Fast, large area multiphoton exoscope (FLAME) for macroscopic imaging with microscopic resolution of human skin. Scientific Reports. 10: 18093. PMID 33093610 DOI: 10.1038/s41598-020-75172-9   
2020 Markov P, Hayes AJ, Zhu H, Boote C, Blain EJ. 3D immuno-confocal image reconstruction of fibroblast cytoskeleton and nucleus architecture. Journal of Biophotonics. e2619. PMID 33038053 DOI: 10.1002/jbio.202000202   
2020 Brujic D, Chappell KE, Ristic M. Accuracy of collagen fibre estimation under noise using directional MR imaging. Computerized Medical Imaging and Graphics : the Official Journal of the Computerized Medical Imaging Society. 86: 101796. PMID 33069034 DOI: 10.1016/j.compmedimag.2020.101796   
2020 Carrier M, Robert MÈ, González Ibáñez F, Desjardins M, Tremblay MÈ. Imaging the Neuroimmune Dynamics Across Space and Time. Frontiers in Neuroscience. 14: 903. PMID 33071723 DOI: 10.3389/fnins.2020.00903   
2020 Amiri M, Tehrani AKZ, Rivaz H. Segmentation of Ultrasound Images based on Scatterer Density using U-Net. Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual International Conference. 2020: 2063-2066. PMID 33018411 DOI: 10.1109/EMBC44109.2020.9175353   
2020 Iyer RR, Žurauskas M, Cui Q, Gao L, Theodore Smith R, Boppart SA. Full-field spectral-domain optical interferometry for snapshot three-dimensional microscopy. Biomedical Optics Express. 11: 5903-5919. PMID 33149995 DOI: 10.1364/BOE.402796   
2020 Badon A, Barolle V, Irsch K, Boccara AC, Fink M, Aubry A. Distortion matrix concept for deep optical imaging in scattering media. Science Advances. 6: eaay7170. PMID 32923603 DOI: 10.1126/sciadv.aay7170   
2020 Fernández R, Marcos-Vidal A, Gallego S, Beléndez A, Desco M, Ripoll J. Qualitative disorder measurements from backscattering spectra through an optical fiber. Biomedical Optics Express. 11: 6038-6048. PMID 33150004 DOI: 10.1364/BOE.396013   
2020 Cao F, Yao K, Liang J. Deconvolutional neural network for image super-resolution. Neural Networks : the Official Journal of the International Neural Network Society. 132: 394-404. PMID 33010715 DOI: 10.1016/j.neunet.2020.09.017   
2020 Aguénounon E, Smith JT, Al-Taher M, Diana M, Intes X, Gioux S. Real-time, wide-field and high-quality single snapshot imaging of optical properties with profile correction using deep learning. Biomedical Optics Express. 11: 5701-5716. PMID 33149980 DOI: 10.1364/BOE.397681   
2020 Phung MC, Rouse AR, Pangilinan J, Bell RC, Bracamonte ER, Mashi S, Gmitro AF, Lee BR. Investigation of confocal microscopy for differentiation of renal cell carcinoma versus benign tissue. Can an optical biopsy be performed? Asian Journal of Urology. 7: 363-368. PMID 32995282 DOI: 10.1016/j.ajur.2019.12.008   
2020 Waugh B, Wolf SG, Fass D, Branlund E, Kam Z, Sedat JW, Elbaum M. Three-dimensional deconvolution processing for STEM cryotomography. Proceedings of the National Academy of Sciences of the United States of America. PMID 33077585 DOI: 10.1073/pnas.2000700117   
2020 Roth J, Mehl J, Rohrbach A. Fast TIRF-SIM imaging of dynamic, low-fluorescent biological samples. Biomedical Optics Express. 11: 4008-4026. PMID 33014582 DOI: 10.1364/BOE.391561   
2020 Chakraborty T, Chen B, Daetwyler S, Chang BJ, Vanderpoorten O, Sapoznik E, Kaminski CF, Knowles TPJ, Dean KM, Fiolka R. Converting lateral scanning into axial focusing to speed up three-dimensional microscopy. Light, Science & Applications. 9: 165. PMID 33024553 DOI: 10.1038/s41377-020-00401-9   
2020 Blaney G, Sassaroli A, Fantini S. Design of a source-detector array for dual-slope diffuse optical imaging. The Review of Scientific Instruments. 91: 093702. PMID 33003793 DOI: 10.1063/5.0015512   
2020 Jiang J, Costanzo Mata AD, Lindner S, Charbon E, Wolf M, Kalyanov A. Dynamic time domain near-infrared optical tomography based on a SPAD camera. Biomedical Optics Express. 11: 5470-5477. PMID 33149964 DOI: 10.1364/BOE.399387   
2020 Widen JC, Tholen M, Yim JJ, Antaris A, Casey KM, Rogalla S, Klaassen A, Sorger J, Bogyo M. AND-gate contrast agents for enhanced fluorescence-guided surgery. Nature Biomedical Engineering. PMID 32989286 DOI: 10.1038/s41551-020-00616-6   
2020 Sun T, Zeng X, Hao PH, Chin CT, Chen M, Yan JJ, Dai M, Lin HM, Chen S, Chen X. Optimization of multi-angle Magneto-Acousto-Electrical Tomography (MAET) based on a numerical method. Mathematical Biosciences and Engineering : Mbe. 17: 2864-2880. PMID 32987504 DOI: 10.3934/mbe.2020161   
2020 Király B, Balázsfi D, Horváth I, Solari N, Sviatkó K, Lengyel K, Birtalan E, Babos M, Bagaméry G, Máthé D, Szigeti K, Hangya B. In vivo localization of chronically implanted electrodes and optic fibers in mice. Nature Communications. 11: 4686. PMID 32943633 DOI: 10.1038/s41467-020-18472-y   
2020 Yanny K, Antipa N, Liberti W, Dehaeck S, Monakhova K, Liu FL, Shen K, Ng R, Waller L. Miniscope3D: optimized single-shot miniature 3D fluorescence microscopy. Light, Science & Applications. 9: 171. PMID 33082940 DOI: 10.1038/s41377-020-00403-7   
2020 Yanny K, Antipa N, Liberti W, Dehaeck S, Monakhova K, Liu FL, Shen K, Ng R, Waller L. Miniscope3D: optimized single-shot miniature 3D fluorescence microscopy. Light, Science & Applications. 9: 171. PMID 33082940 DOI: 10.1038/s41377-020-00403-7   
2020 Perevedentseva E, Ali N, Lin YC, Karmenyan A, Chang CC, Bibikova O, Skovorodkin I, Prunskaite-Hyyryläinen R, Vainio SJ, Kinnunen M, Cheng CL. Au nanostar nanoparticle as a bio-imaging agent and its detection and visualization in biosystems. Biomedical Optics Express. 11: 5872-5885. PMID 33149993 DOI: 10.1364/BOE.401462   
2020 Postnov DD, Tang J, Erdener SE, Kılıç K, Boas DA. Dynamic light scattering imaging. Science Advances. 6. PMID 33158865 DOI: 10.1126/sciadv.abc4628