William E. Allen - Related publications

Affiliations: 
2013- Bioengineering Stanford University, Palo Alto, CA 
Area:
neural circuits, behavior, imaging, genetics
Website:
http://www.stanford.edu/~wallen
NOTE: We are testing a new system for identifying relevant work based on semantic analysis that identifies similarities between recently published papers and the current author's publications. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches.
50 most relevant papers in past 60 days:
Year Citation  Score
2020 Gracilla DE, Korla PK, Lai MT, Chiang AJ, Liou WS, Sheu JJ. Overexpression of wild type or a Q311E mutant MB21D2 promotes a pro-oncogenic phenotype in HNSCC. Molecular Oncology. PMID 32979859 DOI: 10.1002/1878-0261.12806   
2020 Vasilevich AS, Vermeulen S, Kamphuis M, Roumans N, Eroumé S, Hebels DGAJ, van de Peppel J, Reihs R, Beijer NRM, Carlier A, Carpenter AE, Singh S, de Boer J. On the correlation between material-induced cell shape and phenotypical response of human mesenchymal stem cells. Scientific Reports. 10: 18988. PMID 33149200 DOI: 10.1038/s41598-020-76019-z   
2020 Poltorak MP, Graef P, Tschulik C, Wagner M, Cletiu V, Dreher S, Borjan B, Fraessle SP, Effenberger M, Turk M, Busch DH, Plitzko J, Kugler DG, Ragan S, Schmidt T, et al. Expamers: a new technology to control T cell activation. Scientific Reports. 10: 17832. PMID 33082362 DOI: 10.1038/s41598-020-74595-8   
2020 Canales J, Cruz P, Díaz N, Riquelme D, Leiva-Salcedo E, Cerda O. K Channel Tetramerization Domain 5 (KCTD5) Protein Regulates Cell Migration, Focal Adhesion Dynamics and Spreading through Modulation of Ca Signaling and Rac1 Activity. Cells. 9. PMID 33053687 DOI: 10.3390/cells9102273   
2020 Jam FA, Morimune T, Tsukamura A, Tano A, Tanaka Y, Mori Y, Yamamoto T, Nishimura M, Tooyama I, Mori M. Neuroepithelial cell competition triggers loss of cellular juvenescence. Scientific Reports. 10: 18044. PMID 33093561 DOI: 10.1038/s41598-020-74874-4   
2020 Ren Y, Wang Y, Hao S, Yang Y, Xiong W, Qiu L, Tao J, Tang A. NFE2L3 promotes malignant behavior and EMT of human hepatocellular carcinoma (HepG2) cells via Wnt/β‑catenin pathway. Journal of Cancer. 11: 6939-6949. PMID 33123284 DOI: 10.7150/jca.48100   
2020 Prado MB, Melo Escobar MI, Alves RN, Coelho BP, Fernandes CFL, Boccacino JM, Iglesia RP, Lopes MH. Prion Protein at the Leading Edge: Its Role in Cell Motility. International Journal of Molecular Sciences. 21. PMID 32932634 DOI: 10.3390/ijms21186677   
2020 Depuydt MA, Prange KH, Slenders L, Örd T, Elbersen D, Boltjes A, de Jager SC, Asselbergs FW, de Borst GJ, Aavik E, Lönnberg T, Lutgens E, Glass CK, den Ruijter HM, Kaikkonen MU, et al. Microanatomy of the Human Atherosclerotic Plaque by Single-Cell Transcriptomics. Circulation Research. PMID 32981416 DOI: 10.1161/CIRCRESAHA.120.316770   
2020 Perez-Vale KZ, Peifer M. Orchestrating morphogenesis: building the body plan by cell shape changes and movements. Development (Cambridge, England). 147. PMID 32917667 DOI: 10.1242/dev.191049   
2020 Ichikawa T, Stuckenholz C, Davidson LA. Non-junctional role of Cadherin3 in cell migration and contact inhibition of locomotion via domain-dependent, opposing regulation of Rac1. Scientific Reports. 10: 17326. PMID 33060598 DOI: 10.1038/s41598-020-73862-y   
2020 Lee HS, Jeong GS. Aromadendrin Inhibits T Cell Activation via Regulation of Calcium Influx and NFAT Activity. Molecules (Basel, Switzerland). 25. PMID 33050076 DOI: 10.3390/molecules25194590   
2020 Prunet A, Lefort S, Delanoë-Ayari H, Laperrousaz B, Simon G, Barentin C, Saci S, Argoul F, Guyot B, Rieu JP, Gobert S, Maguer-Satta V, Rivière C. A new agarose-based microsystem to investigate cell response to prolonged confinement. Lab On a Chip. PMID 32975276 DOI: 10.1039/d0lc00732c   
2020 Sánchez N, González-Ramírez MC, Contreras EG, Ubilla A, Li J, Valencia A, Wilson A, Green JBA, Tucker AS, Gaete M. Balance Between Tooth Size and Tooth Number Is Controlled by Hyaluronan. Frontiers in Physiology. 11: 996. PMID 32982773 DOI: 10.3389/fphys.2020.00996   
2020 Sánchez N, González-Ramírez MC, Contreras EG, Ubilla A, Li J, Valencia A, Wilson A, Green JBA, Tucker AS, Gaete M. Balance Between Tooth Size and Tooth Number Is Controlled by Hyaluronan. Frontiers in Physiology. 11: 996. PMID 32982773 DOI: 10.3389/fphys.2020.00996   
2020 Sánchez N, González-Ramírez MC, Contreras EG, Ubilla A, Li J, Valencia A, Wilson A, Green JBA, Tucker AS, Gaete M. Balance Between Tooth Size and Tooth Number Is Controlled by Hyaluronan. Frontiers in Physiology. 11: 996. PMID 32982773 DOI: 10.3389/fphys.2020.00996   
2020 Wang J, Tan S, Yan PP, Xiao X, Zhang H, Zhang SQ, Li W, Cao YX, Wang HY. Irreversible epidermal growth factor receptor inhibitor Z25h exhibits pronounced inhibition on non-small cell lung adenocarcinoma cell line Hcc827. Anti-Cancer Drugs. PMID 33079732 DOI: 10.1097/CAD.0000000000001012   
2020 Passante E. Mast Cell and Basophil Cell Lines: A Compendium. Methods in Molecular Biology (Clifton, N.J.). 2163: 127-144. PMID 32766971 DOI: 10.1007/978-1-0716-0696-4_10   
2020 Healy ZR, Weinhold KJ, Murdoch DM. Transcriptional Profiling of CD8+ CMV-Specific T Cell Functional Subsets Obtained Using a Modified Method for Isolating High-Quality RNA From Fixed and Permeabilized Cells. Frontiers in Immunology. 11: 1859. PMID 32983102 DOI: 10.3389/fimmu.2020.01859   
2020 Harper CV, McNamara AV, Spiller DG, Charnock JC, White MR, Davis JR. Calcium dynamics and chromatin remodeling underlie heterogeneity in prolactin transcription. Journal of Molecular Endocrinology. PMID 33112804 DOI: 10.1530/JME-20-0223   
2020 Song Y, Sun X, Duan F, He C, Wu J, Huang X, Xing K, Sun S, Wang R, Xie F, Mao Y, Wang J, Li S. SYPL1 Inhibits Apoptosis in Pancreatic Ductal Adenocarcinoma Suppression of ROS-Induced ERK Activation. Frontiers in Oncology. 10: 1482. PMID 33042794 DOI: 10.3389/fonc.2020.01482   
2020 Leung RK, Lin Y, Liu Y. Recent Advances in Understandings Towards Pathogenesis and Treatment for Intrauterine Adhesion and Disruptive Insights from Single-Cell Analysis. Reproductive Sciences (Thousand Oaks, Calif.). PMID 33125685 DOI: 10.1007/s43032-020-00343-y   
2020 Li X, Feng G, Wang W, Yi L, Deng L, Zeng K. Effects of Peptide C-OOWW-NH on Transcriptome and Cell Wall of the Postharvest Fungal Pathogen . Frontiers in Microbiology. 11: 574882. PMID 33042086 DOI: 10.3389/fmicb.2020.574882   
2020 Alizadeh E, Castle J, Quirk A, Taylor CDL, Xu W, Prasad A. Cellular morphological features are predictive markers of cancer cell state. Computers in Biology and Medicine. 126: 104044. PMID 33049477 DOI: 10.1016/j.compbiomed.2020.104044   
2020 Xiong G, Xie X, Wang Q, Zhang Y, Ge Y, Lin W, Li M. Immune cell infiltration and related core genes expression characteristics in eosinophilic and non-eosinophilic chronic rhinosinusitis with nasal polyps. Experimental and Therapeutic Medicine. 20: 180. PMID 33101470 DOI: 10.3892/etm.2020.9310   
2020 Nishihara H, Gastfriend BD, Soldati S, Perriot S, Mathias A, Sano Y, Shimizu F, Gosselet F, Kanda T, Palecek SP, Du Pasquier R, Shusta EV, Engelhardt B. Advancing human induced pluripotent stem cell-derived blood-brain barrier models for studying immune cell interactions. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. PMID 33124083 DOI: 10.1096/fj.202001507RR   
2020 Chou SY, Lin CY, Cassino T, Wan L, LeDuc PR. Probing coordinated co-culture cancer related motility through differential micro-compartmentalized elastic substrates. Scientific Reports. 10: 18519. PMID 33116169 DOI: 10.1038/s41598-020-74575-y   
2020 Dong L, He Y, Cao Y, Wang Y, Jia A, Wang Y, Yang Q, Li W, Bi Y, Liu G. Functional differentiation and regulation of follicular T helper cells in inflammation and autoimmunity. Immunology. PMID 33128768 DOI: 10.1111/imm.13282   
2020 Calizo RC, Bell MK, Ron A, Hu M, Bhattacharya S, Wong NJ, Janssen WGM, Perumal G, Pederson P, Scarlata S, Hone J, Azeloglu EU, Rangamani P, Iyengar R. Cell shape regulates subcellular organelle location to control early Ca signal dynamics in vascular smooth muscle cells. Scientific Reports. 10: 17866. PMID 33082406 DOI: 10.1038/s41598-020-74700-x   
2020 Gupta R, Kumar G, Jain BP, Chandra S, Goswami SK. Ectopic expression of 35 kDa and knocking down of 78 kDa SG2NAs induce cytoskeletal reorganization, alter membrane sialylation, and modulate the markers of EMT. Molecular and Cellular Biochemistry. PMID 33083950 DOI: 10.1007/s11010-020-03932-2   
2020 King LE, Zhang HH, Gould CM, Thomas DW, Whitehead LW, Simpson KJ, Burgess AW, Faux MC. Genes regulating membrane-associated E-cadherin and proliferation in adenomatous polyposis coli mutant colon cancer cells: High content siRNA screen. Plos One. 15: e0240746. PMID 33057364 DOI: 10.1371/journal.pone.0240746   
2020 Grimaldi C, Schumacher I, Boquet-Pujadas A, Tarbashevich K, Vos BE, Bandemer J, Schick J, Aalto A, Olivo-Marin JC, Betz T, Raz E. E-cadherin focuses protrusion formation at the front of migrating cells by impeding actin flow. Nature Communications. 11: 5397. PMID 33106478 DOI: 10.1038/s41467-020-19114-z   
2020 Lomakin AJ, Cattin CJ, Cuvelier D, Alraies Z, Molina M, Nader GPF, Srivastava N, Saez PJ, Garcia-Arcos JM, Zhitnyak IY, Bhargava A, Driscoll MK, Welf ES, Fiolka R, Petrie RJ, et al. The nucleus acts as a ruler tailoring cell responses to spatial constraints. Science (New York, N.Y.). 370. PMID 33060332 DOI: 10.1126/science.aba2894   
2020 Kronenberg NM, Tilston-Lunel A, Thompson FE, Chen D, Yu W, Dholakia K, Gather MC, Gunn-Moore FJ. Willin/FRMD6 Influences Mechanical Phenotype and Neuronal Differentiation in Mammalian Cells by Regulating ERK1/2 Activity. Frontiers in Cellular Neuroscience. 14: 552213. PMID 33088261 DOI: 10.3389/fncel.2020.552213   
2020 Alexandrova AY, Chikina AS, Svitkina TM. Actin cytoskeleton in mesenchymal-to-amoeboid transition of cancer cells. International Review of Cell and Molecular Biology. 356: 197-256. PMID 33066874 DOI: 10.1016/bs.ircmb.2020.06.002   
2020 Castagnola S, Cazareth J, Lebrigand K, Jarjat M, Magnone V, Delhaye S, Brau F, Bardoni B, Maurin TO. Agonist-induced Functional Analysis and Cell Sorting coupled with single-cell transcriptomics characterizes cell subtypes in normal and pathological brain. Genome Research. PMID 32973039 DOI: 10.1101/gr.262717.120   
2020 Nagayama K, Ohata S, Obata S, Sato A. Macroscopic and microscopic analysis of the mechanical properties and adhesion force of cells using a single cell tensile test and atomic force microscopy: Remarkable differences in cell types. Journal of the Mechanical Behavior of Biomedical Materials. 110: 103935. PMID 32957229 DOI: 10.1016/j.jmbbm.2020.103935   
2020 Craig DJ, Creeden JF, Einloth KR, Gillman CE, Stanbery L, Hamouda D, Edelman G, Dworkin L, Nemunaitis JJ. Resident Memory T Cells and Their Effect on Cancer. Vaccines. 8. PMID 33019493 DOI: 10.3390/vaccines8040562   
2020 Liu C, Konagaya Y, Chung M, Daigh LH, Fan Y, Yang HW, Terai K, Matsuda M, Meyer T. Altered G1 signaling order and commitment point in cells proliferating without CDK4/6 activity. Nature Communications. 11: 5305. PMID 33082317 DOI: 10.1038/s41467-020-18966-9   
2020 Kim JW, Cho JY, Kim DG, Nam BH, Nho ES, Kim BS, Kim YO, Kong HJ. Establishment of Conditions for Long-Term Maintenance of Primary Embryonic Cell Cultures from Olive Flounder . Development & Reproduction. 24: 207-214. PMID 33110952 DOI: 10.12717/DR.2020.24.3.207   
2020 Box A, DeLay M, Tighe S, Chittur SV, Bergeron A, Cochran M, Lopez P, Meyer EM, Saluk A, Thornton S, Brundage K. Evaluating the Effects of Cell Sorting on Gene Expression. Journal of Biomolecular Techniques : Jbt. 31: 100-111. PMID 32982601 DOI: 10.7171/jbt.20-3103-004   
2020 Byambaragchaa M, Kim JS, Park HK, Kim DJ, Hong SM, Kang MH, Min KS. Constitutive Activation and Inactivation of Mutations Inducing Cell Surface Loss of Receptor and Impairing of Signal Transduction of Agonist-Stimulated Eel Follicle-Stimulating Hormone Receptor. International Journal of Molecular Sciences. 21. PMID 32992880 DOI: 10.3390/ijms21197075   
2020 Zhang R, Chen S, Wang X, Gu X, Yi S. Cell populations in neonatal rat peripheral nerves identified by single-cell transcriptomics. Glia. PMID 33079428 DOI: 10.1002/glia.23928   
2020 Guo Z, Huang M, Yuan Y, Guo Y, Song C, Wang H, Dang X. Nischarin downregulation attenuates cell injury induced by oxidative stress via Wnt signaling. Neuroreport. PMID 33075003 DOI: 10.1097/WNR.0000000000001536   
2020 Carmo J, Cavalcante-Araújo P, Silva J, Ferro J, Correia AC, Lagente V, Barreto E. Uvaol Improves the Functioning of Fibroblasts and Endothelial Cells and Accelerates the Healing of Cutaneous Wounds in Mice. Molecules (Basel, Switzerland). 25. PMID 33126422 DOI: 10.3390/molecules25214982   
2020 Chan J, Mansfield C, Clouet F, Dorussen D, Coen E. Intrinsic Cell Polarity Coupled to Growth Axis Formation in Tobacco BY-2 Cells. Current Biology : Cb. PMID 33035485 DOI: 10.1016/j.cub.2020.09.036   
2020 Hao Q, Zong X, Sun Q, Lin YC, Song YJ, Hashemikhabir S, Hsu RY, Kamran M, Chaudhary R, Tripathi V, Singh DK, Chakraborty A, Li XL, Kim YJ, Orjalo AV, et al. The S-phase-induced lncRNA promotes cell proliferation by controlling YAP1/Hippo signaling pathway. Elife. 9. PMID 33108271 DOI: 10.7554/eLife.55102   
2020 Kondow A, Ohnuma K, Kamei Y, Taniguchi A, Bise R, Sato Y, Yamaguchi H, Nonaka S, Hashimoto K. Light-sheet microscopy-based 3D single-cell tracking reveals a correlation between cell cycle and the start of endoderm cell internalization in early zebrafish development. Development, Growth & Differentiation. PMID 33141940 DOI: 10.1111/dgd.12695   
2020 Kasai Y, Morino T, Mori E, Yamamoto K, Kojima H. ROCK inhibitor combined with Ca controls the myosin II activation and optimizes human nasal epithelial cell sheets. Scientific Reports. 10: 16853. PMID 33033339 DOI: 10.1038/s41598-020-73817-3   
2020 Oberbeck S, Schrader A, Warner K, Jungherz D, Crispatzu G, von Jan J, Chmielewski M, Ianevski A, Diebner HH, Mayer P, Kondo Ados A, Wahnschaffe L, Braun T, Müller TA, Wagle P, et al. Non-canonical effector functions of the T-memory-like T-PLL cell are shaped by cooperative TCL1A and TCR signaling. Blood. PMID 32959065 DOI: 10.1182/blood.2019003348   
2020 Teng R, Wang Y, Lv N, Zhang D, Williamson RA, Lei L, Chen P, Lei L, Wang B, Fu J, Liu X, He A, O'Dwyer M, Hu J. Hypoxia Impairs NK Cell Cytotoxicity through SHP-1-Mediated Attenuation of STAT3 and ERK Signaling Pathways. Journal of Immunology Research. 2020: 4598476. PMID 33123602 DOI: 10.1155/2020/4598476