Michael D. Cleary, Ph.D. - Publications

Affiliations: 
Stanford University, Palo Alto, CA 
Area:
Toxoplasma

17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Cleary MD. Uncovering cell type-specific complexities of gene expression and RNA metabolism by TU-tagging and EC-tagging. Wiley Interdisciplinary Reviews. Developmental Biology. PMID 29369522 DOI: 10.1002/wdev.315  0.358
2017 Hida N, Aboukilila MY, Burow DA, Paul R, Greenberg MM, Fazio M, Beasley S, Spitale RC, Cleary MD. EC-tagging allows cell type-specific RNA analysis. Nucleic Acids Research. PMID 28641402 DOI: 10.1093/Nar/Gkx551  0.335
2013 Gay L, Miller MR, Ventura PB, Devasthali V, Vue Z, Thompson HL, Temple S, Zong H, Cleary MD, Stankunas K, Doe CQ. Mouse TU tagging: a chemical/genetic intersectional method for purifying cell type-specific nascent RNA. Genes & Development. 27: 98-115. PMID 23307870 DOI: 10.1101/Gad.205278.112  0.327
2008 Cleary MD. Cell type-specific analysis of mRNA synthesis and decay in vivo with uracil phosphoribosyltransferase and 4-thiouracil. Methods in Enzymology. 448: 379-406. PMID 19111186 DOI: 10.1016/S0076-6879(08)02619-0  0.386
2008 Zeiner GM, Cleary MD, Fouts AE, Meiring CD, Mocarski ES, Boothroyd JC. RNA analysis by biosynthetic tagging using 4-thiouracil and uracil phosphoribosyltransferase. Methods in Molecular Biology (Clifton, N.J.). 419: 135-46. PMID 18369980 DOI: 10.1007/978-1-59745-033-1_9  0.609
2006 Boyle JP, Saeij JP, Cleary MD, Boothroyd JC. Analysis of gene expression during development: lessons from the Apicomplexa. Microbes and Infection / Institut Pasteur. 8: 1623-30. PMID 16697685 DOI: 10.1016/J.Micinf.2005.11.017  0.645
2005 Cleary MD, Meiering CD, Jan E, Guymon R, Boothroyd JC. Biosynthetic labeling of RNA with uracil phosphoribosyltransferase allows cell-specific microarray analysis of mRNA synthesis and decay. Nature Biotechnology. 23: 232-7. PMID 15685165 DOI: 10.1038/Nbt1061  0.587
2003 Boothroyd JC, Blader I, Cleary M, Singh U. DNA microarrays in parasitology: strengths and limitations. Trends in Parasitology. 19: 470-6. PMID 14519585 DOI: 10.1016/J.Pt.2003.08.002  0.621
2002 Karlin S, Chen C, Gentles AJ, Cleary M. Associations between human disease genes and overlapping gene groups and multiple amino acid runs. Proceedings of the National Academy of Sciences of the United States of America. 99: 17008-13. PMID 12473749 DOI: 10.1073/Pnas.262658799  0.423
2002 Cleary MD, Singh U, Blader IJ, Brewer JL, Boothroyd JC. Toxoplasma gondii asexual development: identification of developmentally regulated genes and distinct patterns of gene expression. Eukaryotic Cell. 1: 329-40. PMID 12455982 DOI: 10.1128/Ec.1.3.329-340.2002  0.657
1994 Rubnitz J, Morrissey J, Savage P, Cleary M. ENL, the gene fused with HRX in t(11;19) leukemias, encodes a nuclear protein with transcriptional activation potential in lymphoid and myeloid cells Blood. 84: 1747-1752. DOI: 10.1182/Blood.V84.6.1747.Bloodjournal8461747  0.376
1994 Hunger S, Devaraj P, Foroni L, Secker-Walker L, Cleary M. Two types of genomic rearrangements create alternative E2A-HLF fusion proteins in t(17;19)-ALL. Blood. 83: 2970-2977. DOI: 10.1182/Blood.V83.10.2970.2970  0.354
1993 Chleq-Deschamps C, LeBrun D, Huie P, Besnier D, Warnke R, Sibley R, Cleary M. Topographical dissociation of BCL-2 messenger RNA and protein expression in human lymphoid tissues. Blood. 81: 293-298. DOI: 10.1182/Blood.V81.2.293.Bloodjournal812293  0.362
1991 Hunger S, Galili N, Carroll A, Crist W, Link M, Cleary M. The t(1;19)(q23;p13) results in consistent fusion of E2A and PBX1 coding sequences in acute lymphoblastic leukemias Blood. 77: 687-693. DOI: 10.1182/Blood.V77.4.687.Bloodjournal774687  0.358
1991 Suryanarayan K, Hunger S, Kohler S, Carroll A, Crist W, Link M, Cleary M. Consistent involvement of the bcr gene by 9;22 breakpoints in pediatric acute leukemias. Blood. 77: 324-330. DOI: 10.1182/Blood.V77.2.324.324  0.36
1988 Cleary M, Nalesnik M, Shearer W, Sklar J. Clonal analysis of transplant-associated lymphoproliferations based on the structure of the genomic termini of the Epstein-Barr virus Blood. 72: 349-352. DOI: 10.1182/Blood.V72.1.349.349  0.328
1985 Crist W, Cleary M, Grossi C, Prasthofer E, Heggie G, Omura G, Carroll A, Link M, Sklar J. Acute leukemias associated with the 4;11 chromosome translocation have rearranged immunoglobulin heavy chain genes. Blood. 66: 33-38. DOI: 10.1182/Blood.V66.1.33.Bloodjournal66133  0.349
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