| Year |
Citation |
Score |
| 2023 |
Jensen D, Ruiz Manzano A, Rector M, Tomko EJ, Record MT, Galburt EA. High-throughput, fluorescent-aptamer-based measurements of steady-state transcription rates for the Mycobacterium tuberculosis RNA polymerase. Nucleic Acids Research. 51: e99. PMID 37739412 DOI: 10.1093/nar/gkad761 |
0.531 |
|
| 2023 |
Jensen D, Manzano AR, Rector M, Tomko EJ, Record MT, Galburt EA. High-throughput, fluorescent-aptamer-based measurements of steady-state transcription rates for RNA polymerase. Biorxiv : the Preprint Server For Biology. PMID 36993414 DOI: 10.1101/2023.03.13.532464 |
0.528 |
|
| 2022 |
Chadda A, Jensen D, Tomko EJ, Ruiz Manzano A, Nguyen B, Lohman TM, Galburt EA. DNA repair helicase UvrD1 is activated by redox-dependent dimerization via a 2B domain cysteine. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 35173050 DOI: 10.1073/pnas.2114501119 |
0.746 |
|
| 2021 |
Tomko EJ, Luyties O, Rimel JK, Tsai CL, Fuss JO, Fishburn J, Hahn S, Tsutakawa SE, Taatjes DJ, Galburt EA. The role of XPB/Ssl2 dsDNA translocation processivity in transcription-start-site scanning. Journal of Molecular Biology. 166813. PMID 33453189 DOI: 10.1016/j.jmb.2021.166813 |
0.335 |
|
| 2019 |
Tomko EJ, Galburt EA. Single-molecule approach for studying Pol II transcription initiation using magnetic tweezers. Methods (San Diego, Calif.). PMID 30898685 DOI: 10.1016/J.Ymeth.2019.03.010 |
0.352 |
|
| 2017 |
Tomko EJ, Fishburn J, Hahn S, Galburt EA. TFIIH generates a six-base-pair open complex during RNAP II transcription initiation and start-site scanning. Nature Structural & Molecular Biology. PMID 29106413 DOI: 10.1038/Nsmb.3500 |
0.595 |
|
| 2017 |
Tomko EJ, Lohman TM. Modulation of Escherichia coli UvrD Single-Stranded DNA Translocation by DNA Base Composition. Biophysical Journal. 113: 1405-1415. PMID 28978435 DOI: 10.1016/J.Bpj.2017.08.023 |
0.771 |
|
| 2017 |
Galburt EA, Tomko EJ. Conformational selection and induced fit as a useful framework for molecular motor mechanisms. Biophysical Chemistry. 223: 11-16. PMID 28187350 DOI: 10.1016/J.Bpc.2017.01.004 |
0.353 |
|
| 2015 |
Petrova V, Chen SH, Molzberger ET, Tomko E, Chitteni-Pattu S, Jia H, Ordabayev Y, Lohman TM, Cox MM. Active displacement of RecA filaments by UvrD translocase activity. Nucleic Acids Research. 43: 4133-49. PMID 25824953 DOI: 10.1093/Nar/Gkv186 |
0.741 |
|
| 2015 |
Fishburn J, Tomko E, Galburt E, Hahn S. Double-stranded DNA translocase activity of transcription factor TFIIH and the mechanism of RNA polymerase II open complex formation. Proceedings of the National Academy of Sciences of the United States of America. 112: 3961-6. PMID 25775526 DOI: 10.1073/Pnas.1417709112 |
0.66 |
|
| 2014 |
Galburt EA, Tomko EJ, Stump WT, Ruiz Manzano A. Force-dependent melting of supercoiled DNA at thermophilic temperatures. Biophysical Chemistry. 187: 23-8. PMID 24486433 DOI: 10.1016/J.Bpc.2014.01.001 |
0.582 |
|
| 2014 |
Galburt E, Tomko E, Stump T, Manzano AR. Dna Denaturation-Supercoiling Transition at Thermophilic Temperatures Biophysical Journal. 106: 695a. DOI: 10.1016/J.Bpj.2013.11.3844 |
0.549 |
|
| 2013 |
Galletto R, Tomko EJ. Translocation of Saccharomyces cerevisiae Pif1 helicase monomers on single-stranded DNA. Nucleic Acids Research. 41: 4613-27. PMID 23446274 DOI: 10.1093/Nar/Gkt117 |
0.696 |
|
| 2012 |
Fischer CJ, Tomko EJ, Wu CG, Lohman TM. Fluorescence methods to study DNA translocation and unwinding kinetics by nucleic acid motors. Methods in Molecular Biology (Clifton, N.J.). 875: 85-104. PMID 22573437 DOI: 10.1007/978-1-61779-806-1_5 |
0.778 |
|
| 2012 |
Tomko EJ, Fischer CJ, Lohman TM. Single-stranded DNA translocation of E. coli UvrD monomer is tightly coupled to ATP hydrolysis. Journal of Molecular Biology. 418: 32-46. PMID 22342931 DOI: 10.1016/J.Jmb.2012.02.013 |
0.782 |
|
| 2012 |
Tomko EJ, Fishburn J, Hahn S, Galburt E. Mechanisms of Eukaryotic Transcription Initiation Biophysical Journal. 102: 286a. DOI: 10.1016/J.Bpj.2011.11.1580 |
0.432 |
|
| 2010 |
Tomko EJ, Jia H, Park J, Maluf NK, Ha T, Lohman TM. 5'-Single-stranded/duplex DNA junctions are loading sites for E. coli UvrD translocase. The Embo Journal. 29: 3826-39. PMID 20877334 DOI: 10.1038/Emboj.2010.242 |
0.815 |
|
| 2010 |
Tomko EJ, Fischer CJ, Lohman TM. Ensemble methods for monitoring enzyme translocation along single stranded nucleic acids. Methods (San Diego, Calif.). 51: 269-76. PMID 20371288 DOI: 10.1016/J.Ymeth.2010.03.010 |
0.706 |
|
| 2010 |
Fischer CJ, Wooten L, Tomko EJ, Lohman TM. Kinetics of motor protein translocation on single-stranded DNA. Methods in Molecular Biology (Clifton, N.J.). 587: 45-56. PMID 20225141 DOI: 10.1007/978-1-60327-355-8_4 |
0.777 |
|
| 2010 |
Tomko EJ, Maluf NK, Lohman TM. 5′-Single Stranded DNA Duplex Junctions Provide Specific Loading Sites for the E. coli UvrD Single Stranded DNA Translocase Biophysical Journal. 98: 267a. DOI: 10.1016/J.Bpj.2009.12.1456 |
0.825 |
|
| 2009 |
Antony E, Tomko EJ, Xiao Q, Krejci L, Lohman TM, Ellenberger T. Srs2 disassembles Rad51 filaments by a protein-protein interaction triggering ATP turnover and dissociation of Rad51 from DNA. Molecular Cell. 35: 105-15. PMID 19595720 DOI: 10.1016/J.Molcel.2009.05.026 |
0.816 |
|
| 2008 |
Lohman TM, Tomko EJ, Wu CG. Non-hexameric DNA helicases and translocases: mechanisms and regulation. Nature Reviews. Molecular Cell Biology. 9: 391-401. PMID 18414490 DOI: 10.1038/Nrm2394 |
0.804 |
|
| 2007 |
Niedziela-Majka A, Chesnik MA, Tomko EJ, Lohman TM. Bacillus stearothermophilus PcrA monomer is a single-stranded DNA translocase but not a processive helicase in vitro. The Journal of Biological Chemistry. 282: 27076-85. PMID 17631491 DOI: 10.1074/Jbc.M704399200 |
0.774 |
|
| 2007 |
Tomko EJ, Fischer CJ, Niedziela-Majka A, Lohman TM. A nonuniform stepping mechanism for E. coli UvrD monomer translocation along single-stranded DNA. Molecular Cell. 26: 335-47. PMID 17499041 DOI: 10.1016/J.Molcel.2007.03.024 |
0.804 |
|
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