Andrew E. Vaughan, Ph.D. - Publications

Affiliations: 
University of Washington, Seattle, Seattle, WA 

33 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Zhao G, Xue L, Weiner AI, Gong N, Adams-Tzivelekidis S, Wong J, Gentile ME, Nottingham AN, Basil MC, Lin SM, Niethamer TK, Diamond JM, Bermudez CA, Cantu E, Han X, ... ... Vaughan AE, et al. TGF-βR2 signaling coordinates pulmonary vascular repair after viral injury in mice and human tissue. Science Translational Medicine. 16: eadg6229. PMID 38295183 DOI: 10.1126/scitranslmed.adg6229  0.354
2024 Shiraishi K, Morley MP, Jones DL, Zhao G, Weiner AI, Basil MC, Cantu E, Ferguson LT, Oyster M, Babu A, Ying Y, Zhou S, Li S, Vaughan AE, Morrisey EE. Airway epithelial cell identity and plasticity are constrained by Sox2 during lung homeostasis, tissue regeneration, and in human disease. Npj Regenerative Medicine. 9: 2. PMID 38182591 DOI: 10.1038/s41536-023-00344-w  0.488
2023 Zhao G, Gentile ME, Xue L, Cosgriff CV, Weiner AI, Adams-Tzivelekidis S, Wong J, Li X, Kass-Gergi S, Holcomb NP, Basal MC, Stewart KM, Planer JD, Cantu E, Christie JD, ... ... Vaughan AE, et al. Vascular Endothelial-derived SPARCL1 Exacerbates Viral Pneumonia Through Pro-Inflammatory Macrophage Activation. Biorxiv : the Preprint Server For Biology. PMID 37292817 DOI: 10.1101/2023.05.25.541966  0.348
2022 Sierra I, Pyfrom S, Weiner A, Zhao G, Driscoll A, Yu X, Gregory BD, Vaughan AE, Anguera MC. Unusual X chromosome inactivation maintenance in female alveolar type 2 cells is correlated with increased numbers of X-linked escape genes and sex-biased gene expression. Stem Cell Reports. PMID 36638790 DOI: 10.1016/j.stemcr.2022.12.005  0.747
2022 Weiner AI, Zhao G, Zayas HM, Holcomb NP, Adams-Tzivelekidis S, Wong J, Gentile ME, Reddy D, Wei J, Palashikar G, Quansah KK, Vaughan AE. ΔNp63 drives dysplastic alveolar remodeling and restricts epithelial plasticity upon severe lung injury. Cell Reports. 41: 111805. PMID 36516758 DOI: 10.1016/j.celrep.2022.111805  0.785
2022 Barr J, Gentile ME, Lee S, Kotas ME, Fernanda de Mello Costa M, Holcomb NP, Jaquish A, Palashikar G, Soewignjo M, McDaniel M, Matsumoto I, Margolskee R, Von Moltke J, Cohen NA, Sun X, ... Vaughan AE, et al. Injury-induced pulmonary tuft cells are heterogenous, arise independent of key Type 2 cytokines, and are dispensable for dysplastic repair. Elife. 11. PMID 36073526 DOI: 10.7554/eLife.78074  0.517
2022 Kass-Gergi S, Vaughan AE. Alveolar Repair After Viral Injury: A Tale of Two Cell Types. American Journal of Respiratory Cell and Molecular Biology. PMID 35816439 DOI: 10.1165/rcmb.2022-0254ED  0.327
2022 Ikonomou L, Magnusson M, Dries R, Herzog EL, Hynds R, Borok Z, Park JA, Skolasinski S, Burgess JK, Turner L, Mojarad SM, Mahoney JE, Lynch T, Lehmann M, Thannickal VJ, ... ... Vaughan AE, et al. Stem Cells, Cell Therapies, and Bioengineering in Lung Biology and Disease 2021. American Journal of Physiology. Lung Cellular and Molecular Physiology. PMID 35762622 DOI: 10.1152/ajplung.00113.2022  0.475
2022 Loebel C, Weiner AI, Eiken MK, Katzen JB, Morley MP, Bala V, Cardenas-Diaz FL, Davidson MD, Shiraishi K, Basil MC, Ferguson LT, Spence JR, Ochs M, Beers MF, Morrisey EE, ... Vaughan AE, et al. Microstructured hydrogels to guide self-assembly and function of lung alveolospheres. Advanced Materials (Deerfield Beach, Fla.). e2202992. PMID 35522531 DOI: 10.1002/adma.202202992  0.758
2021 Lam LKM, Murphy S, Kokkinaki D, Venosa A, Sherrill-Mix S, Casu C, Rivella S, Weiner A, Park J, Shin S, Vaughan AE, Hahn BH, Odom John AR, Meyer NJ, Hunter CA, et al. DNA binding to TLR9 expressed by red blood cells promotes innate immune activation and anemia. Science Translational Medicine. 13: eabj1008. PMID 34669439 DOI: 10.1126/scitranslmed.abj1008  0.704
2020 Zhao G, Weiner AI, Neupauer KM, de Mello Costa MF, Palashikar G, Adams-Tzivelekidis S, Mangalmurti NS, Vaughan AE. Regeneration of the pulmonary vascular endothelium after viral pneumonia requires COUP-TF2. Science Advances. 6. PMID 33239293 DOI: 10.1126/sciadv.abc4493  0.753
2020 Fernanda de Mello Costa M, Weiner AI, Vaughan AE. Basal-like Progenitor Cells: A Review of Dysplastic Alveolar Regeneration and Remodeling in Lung Repair. Stem Cell Reports. PMID 33065046 DOI: 10.1016/j.stemcr.2020.09.006  0.785
2020 Jackson SR, Costa MFDM, Pastore CF, Zhao G, Weiner AI, Adams S, Palashikar G, Quansah K, Hankenson K, Herbert DR, Vaughan AE. R-spondin 2 mediates neutrophil egress into the alveolar space through increased lung permeability. Bmc Research Notes. 13: 54. PMID 32019591 DOI: 10.1186/S13104-020-4930-8  0.486
2019 Garcia GL, Valenzuela A, Manzoni T, Vaughan A, López CB. Distinct chronic post-viral lung diseases upon infection with influenza or parainfluenza viruses differentially impact superinfection outcome. The American Journal of Pathology. PMID 31866346 DOI: 10.1016/J.Ajpath.2019.11.003  0.429
2019 Weiner AI, Jackson SR, Zhao G, Quansah KK, Farshchian JN, Neupauer KM, Littauer EQ, Paris AJ, Liberti DC, Scott Worthen G, Morrisey EE, Vaughan AE. Mesenchyme-free expansion and transplantation of adult alveolar progenitor cells: steps toward cell-based regenerative therapies. Npj Regenerative Medicine. 4: 17. PMID 31452939 DOI: 10.1038/S41536-019-0080-9  0.762
2019 Singh S, Elenio E, Leu AN, Romano RA, Vaughan AE, DeRiso J, Surendran K, Chakrabarti R. A new Elf5 BAC transgenic mouse model for tracing Elf5 cell lineages in adult tissues. Febs Letters. PMID 31002388 DOI: 10.1002/1873-3468.13390  0.354
2019 Rane CK, Jackson SR, Pastore CF, Zhao G, Weiner AI, Patel NN, Herbert DR, Cohen NA, Vaughan AE. Development of solitary chemosensory cells in the distal lung after severe influenza injury. American Journal of Physiology. Lung Cellular and Molecular Physiology. PMID 30908939 DOI: 10.1152/Ajplung.00032.2019  0.778
2018 Hung LY, Sen D, Oniskey TK, Katzen J, Cohen NA, Vaughan AE, Nieves W, Urisman A, Beers MF, Krummel MF, Herbert DR. Macrophages promote epithelial proliferation following infectious and non-infectious lung injury through a Trefoil factor 2-dependent mechanism. Mucosal Immunology. PMID 30337651 DOI: 10.1038/S41385-018-0096-2  0.542
2018 Hung LY, Oniskey TK, Sen D, Krummel MF, Vaughan AE, Cohen NA, Herbert DR. Trefoil factor 2 promotes Type 2 immunity and lung repair through intrinsic roles in hematopoietic and non-hematopoietic cells. The American Journal of Pathology. PMID 29458008 DOI: 10.1016/J.Ajpath.2018.01.020  0.554
2017 Xi Y, Kim T, Brumwell AN, Driver IH, Wei Y, Tan V, Jackson JR, Xu J, Lee DK, Gotts JE, Matthay MA, Shannon JM, Chapman HA, Vaughan AE. Local lung hypoxia determines epithelial fate decisions during alveolar regeneration. Nature Cell Biology. PMID 28737769 DOI: 10.1038/Ncb3580  0.556
2017 Vaughan AE, Chapman HA. Failure of Alveolar Type 2 Cell Maintenance Links Neonatal Distress with Adult Lung Disease. American Journal of Respiratory Cell and Molecular Biology. 56: 415-416. PMID 28362148 DOI: 10.1165/Rcmb.2016-0411Ed  0.461
2017 Miller AD, De Las Heras M, Yu J, Zhang F, Liu SL, Vaughan AE, Vaughan TL, Rosadio R, Rocca S, Palmieri G, Goedert JJ, Fujimoto J, Wistuba II. Evidence against a role for jaagsiekte sheep retrovirus in human lung cancer. Retrovirology. 14: 3. PMID 28107820 DOI: 10.1186/S12977-017-0329-6  0.67
2016 Kanegai CM, Xi Y, Donne ML, Gotts JE, Driver IH, Amidzic G, Lechner AJ, Jones KD, Vaughan AE, Chapman HA, Rock JR. Persistent Pathology in Influenza-Infected Mouse Lungs. American Journal of Respiratory Cell and Molecular Biology. 55: 613-615. PMID 27689795 DOI: 10.1165/Rcmb.2015-0387Le  0.475
2015 Vaughan AE, Brumwell AN, Xi Y, Gotts JE, Brownfield DG, Treutlein B, Tan K, Tan V, Liu FC, Looney MR, Matthay MA, Rock JR, Chapman HA. Lineage-negative progenitors mobilize to regenerate lung epithelium after major injury. Nature. 517: 621-5. PMID 25533958 DOI: 10.1038/Nature14112  0.564
2015 Vaughan A, Brumwell A, Chapman H. Orthotopic lung epithelial cell transplantation Protocol Exchange. DOI: 10.1038/Protex.2015.019  0.511
2015 Vaughan A, Brumwell A, Chapman H. Lung Epithelial Cell Prep Protocol Exchange. DOI: 10.1038/Nprot.Test-Junk.06.3493  0.557
2013 Vaughan AE, Chapman HA. Regenerative activity of the lung after epithelial injury. Biochimica Et Biophysica Acta. 1832: 922-30. PMID 23219956 DOI: 10.1016/J.Bbadis.2012.11.020  0.568
2012 Vaughan AE, Mendoza R, Aranda R, Battini JL, Miller AD. Xpr1 is an atypical G-protein-coupled receptor that mediates xenotropic and polytropic murine retrovirus neurotoxicity. Journal of Virology. 86: 1661-9. PMID 22090134 DOI: 10.1128/JVI.06073-11  0.454
2012 Vaughan AE, Halbert CL, Wootton SK, Miller AD. Lung cancer in mice induced by the jaagsiekte sheep retrovirus envelope protein is not maintained by rare cancer stem cells, but tumorigenicity does correlate with Wnt pathway activation. Molecular Cancer Research : McR. 10: 86-95. PMID 22064658 DOI: 10.1158/1541-7786.Mcr-11-0285  0.576
2011 Mendoza R, Vaughan AE, Miller AD. The left half of the XMRV retrovirus is present in an endogenous retrovirus of NIH/3T3 Swiss mouse cells. Journal of Virology. 85: 9247-8. PMID 21697491 DOI: 10.1128/Jvi.05137-11  0.474
2011 Vaughan AE, Mendoza R, Aranda R, Battini J, Miller AD. Mechanism for XMRV neurotoxicity Retrovirology. 8: O18. DOI: 10.1186/1742-4690-8-S2-O18  0.531
2010 Halbert CL, Madtes DK, Vaughan AE, Wang Z, Storb R, Tapscott SJ, Miller AD. Expression of Human α1-Antitrypsin in Mice and Dogs Following AAV6 Vector-mediated Gene Transfer to the Lungs. Molecular Therapy : the Journal of the American Society of Gene Therapy. 18: 1165-1172. PMID 28178495 DOI: 10.1038/mt.2010.51  0.349
2010 Halbert CL, Madtes DK, Vaughan AE, Wang Z, Storb R, Tapscott SJ, Miller AD. Expression of human alpha1-antitrypsin in mice and dogs following AAV6 vector-mediated gene transfer to the lungs. Molecular Therapy : the Journal of the American Society of Gene Therapy. 18: 1165-72. PMID 20372105 DOI: 10.1038/Mt.2010.51  0.562
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