| Year |
Citation |
Score |
| 2019 |
Hörl D, Rojas Rusak F, Preusser F, Tillberg P, Randel N, Chhetri RK, Cardona A, Keller PJ, Harz H, Leonhardt H, Treier M, Preibisch S. BigStitcher: reconstructing high-resolution image datasets of cleared and expanded samples. Nature Methods. PMID 31384047 DOI: 10.1038/s41592-019-0501-0 |
0.32 |
|
| 2019 |
Kohsaka H, Zwart MF, Fushiki A, Fetter RD, Truman JW, Cardona A, Nose A. Regulation of forward and backward locomotion through intersegmental feedback circuits in Drosophila larvae. Nature Communications. 10: 2654. PMID 31201326 DOI: 10.1038/s41467-019-10695-y |
0.4 |
|
| 2019 |
Andrade IV, Riebli N, Nguyen BM, Omoto JJ, Cardona A, Hartenstein V. Developmentally Arrested Precursors of Pontine Neurons Establish an Embryonic Blueprint of the Drosophila Central Complex. Current Biology : Cb. PMID 30661802 DOI: 10.1016/j.cub.2018.12.012 |
1 |
|
| 2018 |
Miroschnikow A, Schlegel P, Schoofs A, Hueckesfeld S, Li F, Schneider-Mizell CM, Fetter RD, Truman JW, Cardona A, Pankratz MJ. Convergence of monosynaptic and polysynaptic sensory paths onto common motor outputs in a feeding connectome. Elife. 7. PMID 30526854 DOI: 10.7554/eLife.40247 |
0.4 |
|
| 2018 |
Carreira-Rosario A, Zarin AA, Clark MQ, Manning L, Fetter RD, Cardona A, Doe CQ. MDN brain descending neurons coordinately activate backward and inhibit forward locomotion. Elife. 7. PMID 30070205 DOI: 10.7554/eLife.38554 |
0.4 |
|
| 2017 |
Larderet I, Fritsch PM, Gendre N, Neagu-Maier GL, Fetter RD, Schneider-Mizell CM, Truman JW, Zlatic M, Cardona A, Sprecher SG. Organization of the larval visual circuit. Elife. 6. PMID 30726702 DOI: 10.7554/eLife.28387 |
0.44 |
|
| 2017 |
Takagi S, Cocanougher BT, Niki S, Miyamoto D, Kohsaka H, Kazama H, Fetter RD, Truman JW, Zlatic M, Cardona A, Nose A. Divergent Connectivity of Homologous Command-like Neurons Mediates Segment-Specific Touch Responses in Drosophila. Neuron. PMID 29198754 DOI: 10.1016/j.neuron.2017.10.030 |
0.4 |
|
| 2017 |
Gerhard S, Andrade I, Fetter RD, Cardona A, Schneider-Mizell CM. Conserved neural circuit structure across Drosophila larva development revealed by comparative connectomics. Elife. 6. PMID 29058674 DOI: 10.7554/eLife.29089 |
0.4 |
|
| 2017 |
Eichler K, Li F, Litwin-Kumar A, Park Y, Andrade I, Schneider-Mizell CM, Saumweber T, Huser A, Eschbach C, Gerber B, Fetter RD, Truman JW, Priebe CE, Abbott LF, Thum AS, ... ... Cardona A, et al. The complete connectome of a learning and memory centre in an insect brain. Nature. 548: 175-182. PMID 28796202 DOI: 10.1038/nature23455 |
0.4 |
|
| 2017 |
Arganda-Carreras I, Kaynig V, Rueden C, Eliceiri KW, Schindelin J, Cardona A, Seung HS. Trainable Weka Segmentation: a machine learning tool for microscopy pixel classification. Bioinformatics (Oxford, England). PMID 28369169 DOI: 10.1093/bioinformatics/btx180 |
0.68 |
|
| 2017 |
Funke J, Klein J, Moreno-Noguer F, Cardona A, Cook M. TED: A Tolerant Edit Distance for Segmentation Evaluation. Methods (San Diego, Calif.). PMID 28108198 DOI: 10.1016/j.ymeth.2016.12.013 |
0.4 |
|
| 2016 |
Schlegel P, Texada MJ, Miroschnikow A, Schoofs A, Hückesfeld S, Peters M, Schneider-Mizell CM, Lacin H, Li F, Fetter RD, Truman JW, Cardona A, Pankratz MJ. Synaptic transmission parallels neuromodulation in a central food-intake circuit. Elife. 5. PMID 27845623 DOI: 10.7554/eLife.16799 |
0.4 |
|
| 2016 |
Jovanic T, Schneider-Mizell CM, Shao M, Masson JB, Denisov G, Fetter RD, Mensh BD, Truman JW, Cardona A, Zlatic M. Competitive Disinhibition Mediates Behavioral Choice and Sequences in Drosophila. Cell. PMID 27720450 DOI: 10.1016/j.cell.2016.09.009 |
0.4 |
|
| 2016 |
Zwart MF, Pulver SR, Truman JW, Fushiki A, Fetter RD, Cardona A, Landgraf M. Selective Inhibition Mediates the Sequential Recruitment of Motor Pools. Neuron. 91: 944. PMID 27537488 DOI: 10.1016/j.neuron.2016.07.041 |
0.4 |
|
| 2016 |
Berck ME, Khandelwal A, Claus L, Hernandez-Nunez L, Si G, Tabone CJ, Li F, Truman JW, Fetter RD, Louis M, Samuel AD, Cardona A. The wiring diagram of a glomerular olfactory system. Elife. 5. PMID 27177418 DOI: 10.7554/eLife.14859 |
1 |
|
| 2016 |
MacNamee SE, Liu KE, Gerhard S, Tran CT, Fetter RD, Cardona A, Tolbert LP, Oland LA. Astrocytic glutamate transport regulates a Drosophila CNS synapse that lacks astrocyte ensheathment. The Journal of Comparative Neurology. PMID 27073064 DOI: 10.1002/cne.24016 |
1 |
|
| 2016 |
Schneider-Mizell CM, Gerhard S, Longair M, Kazimiers T, Li F, Zwart MF, Champion A, Midgley FM, Fetter RD, Saalfeld S, Cardona A. Quantitative neuroanatomy for connectomics in Drosophila. Elife. 5. PMID 26990779 DOI: 10.7554/eLife.12059 |
0.68 |
|
| 2016 |
Fushiki A, Zwart MF, Kohsaka H, Fetter RD, Cardona A, Nose A. A circuit mechanism for the propagation of waves of muscle contraction in Drosophila. Elife. 5. PMID 26880545 DOI: 10.7554/eLife.13253 |
0.4 |
|
| 2015 |
Arganda-Carreras I, Turaga SC, Berger DR, Cireşan D, Giusti A, Gambardella LM, Schmidhuber J, Laptev D, Dwivedi S, Buhmann JM, Liu T, Seyedhosseini M, Tasdizen T, Kamentsky L, Burget R, ... ... Cardona A, et al. Crowdsourcing the creation of image segmentation algorithms for connectomics. Frontiers in Neuroanatomy. 9: 142. PMID 26594156 DOI: 10.3389/fnana.2015.00142 |
1 |
|
| 2015 |
Heckscher ES, Zarin AA, Faumont S, Clark MQ, Manning L, Fushiki A, Schneider-Mizell CM, Fetter RD, Truman JW, Zwart MF, Landgraf M, Cardona A, Lockery SR, Doe CQ. Even-Skipped(+) Interneurons Are Core Components of a Sensorimotor Circuit that Maintains Left-Right Symmetric Muscle Contraction Amplitude. Neuron. 88: 314-29. PMID 26439528 DOI: 10.1016/j.neuron.2015.09.009 |
1 |
|
| 2015 |
Ohyama T, Schneider-Mizell CM, Fetter RD, Aleman JV, Franconville R, Rivera-Alba M, Mensh BD, Branson KM, Simpson JH, Truman JW, Cardona A, Zlatic M. A multilevel multimodal circuit enhances action selection in Drosophila. Nature. 520: 633-9. PMID 25896325 DOI: 10.1038/nature14297 |
1 |
|
| 2015 |
Klein M, Afonso B, Vonner AJ, Hernandez-Nunez L, Berck M, Tabone CJ, Kane EA, Pieribone VA, Nitabach MN, Cardona A, Zlatic M, Sprecher SG, Gershow M, Garrity PA, Samuel AD. Sensory determinants of behavioral dynamics in Drosophila thermotaxis. Proceedings of the National Academy of Sciences of the United States of America. 112: E220-9. PMID 25550513 DOI: 10.1073/pnas.1416212112 |
1 |
|
| 2015 |
Kreshuk A, Funke J, Cardona A, Hamprecht FA. Who is talking to whom: Synaptic partner detection in anisotropic volumes of insect brain Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 9349: 661-668. DOI: 10.1007/978-3-319-24553-9_81 |
1 |
|
| 2014 |
Funke J, Martel JN, Gerhard S, Andres B, CireÅŸan DC, Giusti A, Gambardella LM, Schmidhuber J, Pfister H, Cardona A, Cook M. Candidate sampling for neuron reconstruction from anisotropic electron microscopy volumes. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 17: 17-24. PMID 25333096 |
1 |
|
| 2014 |
Parslow A, Cardona A, Bryson-Richardson RJ. Sample drift correction following 4D confocal time-lapse imaging. Journal of Visualized Experiments : Jove. PMID 24747942 DOI: 10.3791/51086 |
1 |
|
| 2014 |
Funke J, Martel JNP, Gerhard S, Andres B, Cire?an DC, Giusti A, Gambardella LM, Schmidhuber J, Pfister H, Cardona A, Cook M. Candidate sampling for neuron reconstruction from anisotropic electron microscopy volumes Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 8673: 17-24. DOI: 10.1007/978-3-319-10404-1_3 |
1 |
|
| 2013 |
Cardona A. Towards semi-automatic reconstruction of neural circuits. Neuroinformatics. 11: 31-3. PMID 23055046 DOI: 10.1007/s12021-012-9166-x |
1 |
|
| 2012 |
Schindelin J, Arganda-Carreras I, Frise E, Kaynig V, Longair M, Pietzsch T, Preibisch S, Rueden C, Saalfeld S, Schmid B, Tinevez JY, White DJ, Hartenstein V, Eliceiri K, Tomancak P, ... Cardona A, et al. Fiji: an open-source platform for biological-image analysis. Nature Methods. 9: 676-82. PMID 22743772 DOI: 10.1038/nmeth.2019 |
1 |
|
| 2012 |
Cardona A, Tomancak P. Current challenges in open-source bioimage informatics. Nature Methods. 9: 661-5. PMID 22743770 DOI: 10.1038/nmeth.2082 |
1 |
|
| 2012 |
Cardona A, Saalfeld S, Schindelin J, Arganda-Carreras I, Preibisch S, Longair M, Tomancak P, Hartenstein V, Douglas RJ. TrakEM2 software for neural circuit reconstruction. Plos One. 7: e38011. PMID 22723842 DOI: 10.1371/journal.pone.0038011 |
1 |
|
| 2012 |
Saalfeld S, Fetter R, Cardona A, Tomancak P. Elastic volume reconstruction from series of ultra-thin microscopy sections. Nature Methods. 9: 717-20. PMID 22688414 DOI: 10.1038/nmeth.2072 |
1 |
|
| 2012 |
Funke J, Andres B, Hamprecht FA, Cardona A, Cook M. Efficient automatic 3D-reconstruction of branching neurons from em data Proceedings of the Ieee Computer Society Conference On Computer Vision and Pattern Recognition. 1004-1011. DOI: 10.1109/CVPR.2012.6247777 |
1 |
|
| 2011 |
Sprecher SG, Cardona A, Hartenstein V. The Drosophila larval visual system: high-resolution analysis of a simple visual neuropil. Developmental Biology. 358: 33-43. PMID 21781960 DOI: 10.1016/j.ydbio.2011.07.006 |
1 |
|
| 2010 |
Cardona A, Saalfeld S, Preibisch S, Schmid B, Cheng A, Pulokas J, Tomancak P, Hartenstein V. An integrated micro- and macroarchitectural analysis of the Drosophila brain by computer-assisted serial section electron microscopy. Plos Biology. 8. PMID 20957184 DOI: 10.1371/journal.pbio.1000502 |
1 |
|
| 2010 |
Bery A, Cardona A, Martinez P, Hartenstein V. Structure of the central nervous system of a juvenile acoel, Symsagittifera roscoffensis. Development Genes and Evolution. 220: 61-76. PMID 20549514 DOI: 10.1007/s00427-010-0328-2 |
1 |
|
| 2010 |
Saalfeld S, Cardona A, Hartenstein V, Toman?ák P. As-rigid-as-possible mosaicking and serial section registration of large ssTEM datasets. Bioinformatics (Oxford, England). 26: i57-63. PMID 20529937 DOI: 10.1093/bioinformatics/btq219 |
1 |
|
| 2010 |
Cardona A, Saalfeld S, Arganda I, Pereanu W, Schindelin J, Hartenstein V. Identifying neuronal lineages of Drosophila by sequence analysis of axon tracts. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 7538-53. PMID 20519528 DOI: 10.1523/JNEUROSCI.0186-10.2010 |
1 |
|
| 2010 |
Schmid B, Schindelin J, Cardona A, Longair M, Heisenberg M. A high-level 3D visualization API for Java and ImageJ. Bmc Bioinformatics. 11: 274. PMID 20492697 DOI: 10.1186/1471-2105-11-274 |
1 |
|
| 2009 |
Cardona A, Saalfeld S, Tomancak P, Hartenstein V. Drosophila brain development: closing the gap between a macroarchitectural and microarchitectural approach. Cold Spring Harbor Symposia On Quantitative Biology. 74: 235-48. PMID 20028843 DOI: 10.1101/sqb.2009.74.037 |
1 |
|
| 2009 |
Cardona A, Larsen C, Hartenstein V. Neuronal fiber tracts connecting the brain and ventral nerve cord of the early Drosophila larva. The Journal of Comparative Neurology. 515: 427-40. PMID 19459219 DOI: 10.1002/cne.22086 |
1 |
|
| 2009 |
Saalfeld S, Cardona A, Hartenstein V, Tomancak P. CATMAID: collaborative annotation toolkit for massive amounts of image data. Bioinformatics (Oxford, England). 25: 1984-6. PMID 19376822 DOI: 10.1093/bioinformatics/btp266 |
1 |
|
| 2008 |
Schröter C, Herrgen L, Cardona A, Brouhard GJ, Feldman B, Oates AC. Dynamics of zebrafish somitogenesis. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 237: 545-53. PMID 18265021 DOI: 10.1002/dvdy.21458 |
1 |
|
| 2008 |
Hartenstein V, Cardona A, Pereanu W, Younossi-Hartenstein A. Modeling the developing Drosophila brain: Rationale, technique, and application Bioscience. 58: 823-836. DOI: 10.1641/B580910 |
1 |
|
| 2007 |
Morris J, Cardona A, De Miguel-Bonet Mdel M, Hartenstein V. Neurobiology of the basal platyhelminth Macrostomum lignano: map and digital 3D model of the juvenile brain neuropile. Development Genes and Evolution. 217: 569-84. PMID 17611771 DOI: 10.1007/s00427-007-0166-z |
1 |
|
| 2006 |
Cardona A, Hartenstein V, Romero R. Early embryogenesis of planaria: a cryptic larva feeding on maternal resources. Development Genes and Evolution. 216: 667-81. PMID 16932928 DOI: 10.1007/s00427-006-0094-3 |
1 |
|
| 2005 |
Cardona A, Fernández J, Solana J, Romero R. An in situ hybridization protocol for planarian embryos: monitoring myosin heavy chain gene expression. Development Genes and Evolution. 215: 482-88. PMID 16010545 DOI: 10.1007/s00427-005-0003-1 |
1 |
|
| 2005 |
Cardona A, Hartenstein V, Romero R. The embryonic development of the triclad Schmidtea polychroa. Development Genes and Evolution. 215: 109-31. PMID 15599763 DOI: 10.1007/s00427-004-0455-8 |
1 |
|
| 2002 |
Bueno D, Fernà ndez-RodrÃguez J, Cardona A, Hernà ndez-Hernà ndez V, Romero R. A novel invertebrate trophic factor related to invertebrate neurotrophins is involved in planarian body regional survival and asexual reproduction. Developmental Biology. 252: 188-201. PMID 12482709 DOI: 10.1006/dbio.2002.0851 |
1 |
|
| 2001 |
Bueno D, Fernández-Rodríguez J, Cardona A, Hernández V, Romero R. Regeneration of gross molecular body regions in planaria: From molecules to organs International Journal of Developmental Biology. 45: S121-S122. |
1 |
|
| 2001 |
Hernández-Hernández V, Fernández J, Cardona A, Romero R, Bueno D. Selective inhibition of gene expression by RNAi in chick embryos in ovo International Journal of Developmental Biology. 45: S99-S100. |
1 |
|
| 2001 |
Fernández-Rodríguez J, Cardona A, Hernández V, Romero R, Bueno D. TNEX59, a planarian regional nuclear factor differentially expressed during regeneration International Journal of Developmental Biology. 45: S125-S126. |
1 |
|
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