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Colin R. Lickwar, Ph.D. - Publications

Affiliations: 
Genetics & Molecular Biology University of North Carolina, Chapel Hill, Chapel Hill, NC 
Area:
Specificity and Function in Protein-Genome Interactions
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11/17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Heppert JK, Lickwar CR, Tillman MC, Davis BR, Davison JM, Lu HY, Chen W, Busch-Nentwich EM, Corcoran DL, Rawls JF. Conserved roles for Hnf4 family transcription factors in zebrafish development and intestinal function. Genetics. PMID 36218393 DOI: 10.1093/genetics/iyac133  0.31
2020 Heppert JK, Davison JM, Kelly C, Mercado GP, Lickwar CR, Rawls JF. Transcriptional programmes underlying cellular identity and microbial responsiveness in the intestinal epithelium. Nature Reviews. Gastroenterology & Hepatology. PMID 33024279 DOI: 10.1038/s41575-020-00357-6  0.327
2019 Casadei E, Tacchi L, Lickwar CR, Espenschied ST, Davison JM, Muñoz P, Rawls JF, Salinas I. Commensal bacteria regulate gene expression and differentiation in vertebrate olfactory systems through transcription factor REST. Chemical Senses. PMID 31403159 DOI: 10.1093/chemse/bjz050  0.338
2017 Lickwar CR, Camp JG, Weiser M, Cocchiaro JL, Kingsley DM, Furey TS, Sheikh SZ, Rawls JF. Genomic dissection of conserved transcriptional regulation in intestinal epithelial cells. Plos Biology. 15: e2002054. PMID 28850571 DOI: 10.1371/Journal.Pbio.2002054  0.422
2017 Davison JM, Lickwar CR, Song L, Breton G, Crawford GE, Rawls JF. Microbiota regulate intestinal epithelial gene expression by suppressing the transcription factor Hepatocyte nuclear factor 4 alpha. Genome Research. PMID 28385711 DOI: 10.1101/Gr.220111.116  0.369
2014 Camp JG, Frank CL, Lickwar CR, Guturu H, Rube T, Wenger AM, Chen J, Bejerano G, Crawford GE, Rawls JF. Microbiota modulate transcription in the intestinal epithelium without remodeling the accessible chromatin landscape. Genome Research. 24: 1504-16. PMID 24963153 DOI: 10.1101/Gr.165845.113  0.431
2013 Lickwar CR, Mueller F, Lieb JD. Genome-wide measurement of protein-DNA binding dynamics using competition ChIP. Nature Protocols. 8: 1337-53. PMID 23764940 DOI: 10.1038/Nprot.2013.077  0.484
2013 Grohman JK, Gorelick RJ, Lickwar CR, Lieb JD, Bower BD, Znosko BM, Weeks KM. A guanosine-centric mechanism for RNA chaperone function. Science (New York, N.Y.). 340: 190-5. PMID 23470731 DOI: 10.1126/Science.1230715  0.456
2012 Lickwar CR, Mueller F, Hanlon SE, McNally JG, Lieb JD. Genome-wide protein-DNA binding dynamics suggest a molecular clutch for transcription factor function. Nature. 484: 251-5. PMID 22498630 DOI: 10.1038/Nature10985  0.542
2009 Lickwar CR, Rao B, Shabalin AA, Nobel AB, Strahl BD, Lieb JD. The Set2/Rpd3S pathway suppresses cryptic transcription without regard to gene length or transcription frequency. Plos One. 4: e4886. PMID 19295910 DOI: 10.1371/Journal.Pone.0004886  0.486
2006 Luo H, Lee JY, Hu Q, Nelson-Vasilchik K, Eitas TK, Lickwar C, Kausch AP, Chandlee JM, Hodges TK. RTS, a rice anther-specific gene is required for male fertility and its promoter sequence directs tissue-specific gene expression in different plant species. Plant Molecular Biology. 62: 397-408. PMID 16897470 DOI: 10.1007/S11103-006-9031-0  0.419
Low-probability matches (unlikely to be authored by this person)
2022 Lickwar CR, Davison JM, Kelly C, Mercado GP, Wen J, Davis BR, Tillman MC, Semova I, Andres SF, Vale G, McDonald JG, Rawls JF. Transcriptional integration of distinct microbial and nutritional signals by the small intestinal epithelium. Cellular and Molecular Gastroenterology and Hepatology. PMID 35533983 DOI: 10.1016/j.jcmgh.2022.04.013  0.281
2022 Jawahar J, McCumber AW, Lickwar CR, Amoroso CR, de la Torre Canny SG, Wong S, Morash M, Thierer JH, Farber SA, Bohannan BJM, Guillemin K, Rawls JF. Starvation causes changes in the intestinal transcriptome and microbiome that are reversed upon refeeding. Bmc Genomics. 23: 225. PMID 35317738 DOI: 10.1186/s12864-022-08447-2  0.257
2021 Wen J, Mercado GP, Volland A, Doden HL, Lickwar CR, Crooks T, Kakiyama G, Kelly C, Cocchiaro JL, Ridlon JM, Rawls JF. Fxr signaling and microbial metabolism of bile salts in the zebrafish intestine. Science Advances. 7. PMID 34301599 DOI: 10.1126/sciadv.abg1371  0.224
2006 Longo C, Lickwar C, Hu Q, Nelson-Vasilchik K, Viola D, Hague J, Chandlee JM, Luo H, Kausch AP. Turf Grasses. Methods in Molecular Biology (Clifton, N.J.). 344: 83-95. PMID 17033054 DOI: 10.1385/1-59745-131-2:83  0.134
2019 Park J, Levic DS, Sumigray KD, Bagwell J, Eroglu O, Block CL, Eroglu C, Barry R, Lickwar CR, Rawls JF, Watts SA, Lechler T, Bagnat M. Lysosome-Rich Enterocytes Mediate Protein Absorption in the Vertebrate Gut. Developmental Cell. PMID 31474562 DOI: 10.1016/J.Devcel.2019.08.001  0.124
2020 Ye L, Bae M, Cassilly CD, Jabba SV, Thorpe DW, Martin AM, Lu HY, Wang J, Thompson JD, Lickwar CR, Poss KD, Keating DJ, Jordt SE, Clardy J, Liddle RA, et al. Enteroendocrine cells sense bacterial tryptophan catabolites to activate enteric and vagal neuronal pathways. Cell Host & Microbe. PMID 33352109 DOI: 10.1016/j.chom.2020.11.011  0.066
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