Year |
Citation |
Score |
2012 |
Liberles DA, Teichmann SA, Bahar I, Bastolla U, Bloom J, Bornberg-Bauer E, Colwell LJ, de Koning AP, Dokholyan NV, Echave J, Elofsson A, Gerloff DL, Goldstein RA, Grahnen JA, Holder MT, et al. The interface of protein structure, protein biophysics, and molecular evolution. Protein Science : a Publication of the Protein Society. 21: 769-85. PMID 22528593 DOI: 10.1002/Pro.2071 |
0.641 |
|
2012 |
Grahnen JA, Liberles DA. CASS: Protein sequence simulation with explicit genotype-phenotype mapping Trends in Evolutionary Biology. 4: 47-49. DOI: 10.4081/Eb.2012.E9 |
0.643 |
|
2011 |
Siltberg-Liberles J, Grahnen JA, Liberles DA. The evolution of protein structures and structural ensembles under functional constraint. Genes. 2: 748-62. PMID 24710290 DOI: 10.3390/Genes2040748 |
0.674 |
|
2011 |
Grahnen JA, Nandakumar P, Kubelka J, Liberles DA. Biophysical and structural considerations for protein sequence evolution. Bmc Evolutionary Biology. 11: 361. PMID 22171550 DOI: 10.1186/1471-2148-11-361 |
0.679 |
|
2011 |
Konrad A, Teufel AI, Grahnen JA, Liberles DA. Toward a general model for the evolutionary dynamics of gene duplicates. Genome Biology and Evolution. 3: 1197-209. PMID 21920903 DOI: 10.1093/Gbe/Evr093 |
0.565 |
|
2011 |
Grahnen JA, Kubelka J, Liberles DA. Fast side chain replacement in proteins using a coarse-grained approach for evaluating the effects of mutation during evolution. Journal of Molecular Evolution. 73: 23-33. PMID 21800121 DOI: 10.1007/S00239-011-9454-3 |
0.605 |
|
2011 |
Liberles DA, Tisdell MD, Grahnen JA. Binding constraints on the evolution of enzymes and signalling proteins: the important role of negative pleiotropy. Proceedings. Biological Sciences / the Royal Society. 278: 1930-5. PMID 21490020 DOI: 10.1098/Rspb.2010.2637 |
0.628 |
|
2011 |
Grahnen J, Kubelka J. DFT-Based Simulations of Ir Amide I’ Spectra for a Small Protein in Solution Biophysical Journal. 100: 314a. DOI: 10.1016/J.Bpj.2010.12.1916 |
0.397 |
|
2010 |
Grahnen JA, Amunson KE, Kubelka J. DFT-based simulations of IR amide I' spectra for a small protein in solution. Comparison of explicit and empirical solvent models. The Journal of Physical Chemistry. B. 114: 13011-20. PMID 20857992 DOI: 10.1021/Jp106639S |
0.408 |
|
2010 |
Parchman TL, Geist KS, Grahnen JA, Benkman CW, Buerkle CA. Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery. Bmc Genomics. 11: 180. PMID 20233449 DOI: 10.1186/1471-2164-11-180 |
0.398 |
|
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