Serena M. Dudek, Ph.D. - Publications

Affiliations: 
2001- NIEHS 
Area:
synaptic plasticity
Website:
http://www.niehs.nih.gov/research/atniehs/labs/ln/pi/sdp/index.cfm

84/208 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Siegler PN, Shaughnessy EK, Horman B, Vierling TT, King DH, Patisaul HB, Huhman KL, Alexander GM, Dudek SM. Identification of hippocampal area CA2 in hamster and vole brain. Biorxiv : the Preprint Server For Biology. PMID 38405991 DOI: 10.1101/2024.02.12.579957  0.783
2023 Dudek SM, Phoenix AN, Scappini E, Shepeleva DV, Herbeck YE, Trut LN, Farris S, Kukekova AV. Defining hippocampal area CA2 in the fox (Vulpes vulpes) brain. Hippocampus. 33: 700-711. PMID 37159095 DOI: 10.1002/hipo.23546  0.658
2023 Samadi M, Hales CA, Lustberg DJ, Farris S, Ross MR, Zhao M, Hepler JR, Harbin NH, Robinson ESJ, Banks PJ, Bashir ZI, Dudek SM. Mechanisms of mGluR-dependent plasticity in hippocampal area CA2. Hippocampus. PMID 36971428 DOI: 10.1002/hipo.23529  0.824
2023 Dudek SM, Alexander GM, Farris S. Introduction to the special issue on: A new view of hippocampal area CA2. Hippocampus. 33: 127-132. PMID 36826426 DOI: 10.1002/hipo.23514  0.736
2023 Radzicki D, Chong S, Dudek SM. Morphological and molecular markers of mouse area CA2 along the proximodistal and dorsoventral hippocampal axes. Hippocampus. PMID 36762588 DOI: 10.1002/hipo.23509  0.428
2021 Carstens KE, Lustberg DJ, Shaughnessy E, McCann KE, Alexander GM, Dudek SM. Perineuronal net degradation rescues CA2 plasticity in Rett syndrome model mice. The Journal of Clinical Investigation. PMID 34228646 DOI: 10.1172/JCI137221  0.837
2021 Hartmann J, Bajaj T, Klengel C, Chatzinakos C, Ebert T, Dedic N, McCullough KM, Lardenoije R, Joëls M, Meijer OC, McCann KE, Dudek SM, Sarabdjitsingh RA, Daskalakis NP, Klengel T, et al. Mineralocorticoid receptors dampen glucocorticoid receptor sensitivity to stress via regulation of FKBP5. Cell Reports. 35: 109185. PMID 34077736 DOI: 10.1016/j.celrep.2021.109185  0.684
2021 Almeida MF, Piehler T, Carstens KE, Zhao M, Samadi M, Dudek SM, Norton CJ, Parisian CM, Farizatto KLG, Bahr BA. Distinct and dementia-related synaptopathy in the hippocampus after military blast exposures. Brain Pathology (Zurich, Switzerland). e12936. PMID 33629462 DOI: 10.1111/bpa.12936  0.691
2020 Squires KE, Gerber KJ, Tillman MC, Lustberg DJ, Montañez-Miranda C, Zhao M, Ramineni S, Scharer CD, Saha RN, Shu FJ, Schroeder JP, Ortlund EA, Weinshenker D, Dudek SM, Hepler JR. Human genetic variants disrupt RGS14 nuclear shuttling and regulation of LTP in hippocampal neurons. The Journal of Biological Chemistry. 296: 100024. PMID 33410399 DOI: 10.1074/jbc.RA120.016009  0.807
2020 Carstens KE, Gloss BR, Alexander GM, Dudek SM. Modified adeno-associated virus targets the bacterial enzyme chondroitinase ABC to select mouse neuronal populations in vivo using the Cre-LoxP system. The European Journal of Neuroscience. PMID 33220084 DOI: 10.1111/ejn.15050  0.556
2020 Squires KE, Gerber KJ, Tillman MC, Lustberg DJ, Montañez-Miranda C, Zhao M, Ramineni S, Scharer CD, Saha RN, Shu FJ, Schroeder JP, Ortlund EA, Weinshenker D, Dudek SM, Hepler JR. Human genetic variants disrupt RGS14 nuclear shuttling and regulation of LTP in hippocampal neurons. The Journal of Biological Chemistry. PMID 33154163 DOI: 10.1074/jbc.RA120.016009  0.806
2020 Caruana DA, Dudek SM. Adenosine A Receptor-Mediated Synaptic Depression in the Developing Hippocampal Area CA2. Frontiers in Synaptic Neuroscience. 12: 21. PMID 32612520 DOI: 10.3389/fnsyn.2020.00021  0.749
2020 Gu Z, Smith KG, Alexander GM, Guerreiro I, Dudek SM, Gutkin B, Jensen P, Yakel JL. Hippocampal Interneuronal α7 nAChRs Modulate Theta Oscillations in Freely Moving Mice. Cell Reports. 31: 107740. PMID 32521265 DOI: 10.1016/J.Celrep.2020.107740  0.628
2020 Brown LY, Alexander GM, Cushman J, Dudek SM. Hippocampal CA2 Organizes CA1 Slow and Fast Gamma Oscillations during Novel Social and Object Interaction. Eneuro. PMID 32198158 DOI: 10.1523/ENEURO.0084-20.2020  0.645
2019 McCann KE, Lustberg DJ, Shaughnessy EK, Carstens KE, Farris S, Alexander GM, Radzicki D, Zhao M, Dudek SM. Novel role for mineralocorticoid receptors in control of a neuronal phenotype. Molecular Psychiatry. PMID 31745235 DOI: 10.1038/S41380-019-0598-7  0.831
2019 Farris S, Ward JM, Carstens KE, Samadi M, Wang Y, Dudek SM. Hippocampal Subregions Express Distinct Dendritic Transcriptomes that Reveal Differences in Mitochondrial Function in CA2. Cell Reports. 29: 522-539.e6. PMID 31597108 DOI: 10.1016/J.Celrep.2019.08.093  0.789
2019 Alexander GM, Riddick NV, McCann KE, Lustberg D, Moy SS, Dudek SM. Modulation of CA2 Neuronal Activity Increases Behavioral Responses to Fear Conditioning in Female Mice. Neurobiology of Learning and Memory. 107044. PMID 31319167 DOI: 10.1016/J.Nlm.2019.107044  0.825
2019 Gerber KJ, Dammer EB, Duong DM, Deng Q, Dudek SM, Seyfried NT, Hepler JR. Specific Proteomes of Hippocampal Regions CA2 and CA1 Reveal Proteins Linked to the Unique Physiology of Area CA2. Journal of Proteome Research. PMID 31059263 DOI: 10.1021/Acs.Jproteome.9B00103  0.795
2018 Alexander GM, Brown LY, Farris S, Lustberg D, Pantazis C, Gloss B, Plummer NW, Jensen P, Dudek SM. CA2 neuronal activity controls hippocampal low gamma and ripple oscillations. Elife. 7. PMID 30387713 DOI: 10.7554/Elife.38052  0.836
2018 Gu B, Carstens KE, Judson MC, Dalton KA, Rougié M, Clark EP, Dudek SM, Philpot BD. Ube3a reinstatement mitigates epileptogenesis in Angelman syndrome model mice. The Journal of Clinical Investigation. PMID 30352049 DOI: 10.1172/Jci120816  0.601
2018 Carstens KE, Dudek SM. Regulation of synaptic plasticity in hippocampal area CA2. Current Opinion in Neurobiology. PMID 30120016 DOI: 10.1016/j.conb.2018.07.008  0.573
2018 Helton TD, Zhao M, Farris S, Dudek SM. Diversity of dendritic morphology and entorhinal cortex synaptic effectiveness in mouse CA2 pyramidal neurons. Hippocampus. PMID 30067288 DOI: 10.1002/Hipo.23012  0.734
2018 Evans PR, Parra-Bueno P, Smirnov MS, Lustberg DJ, Dudek SM, Hepler JR, Yasuda R. RGS14 Restricts Plasticity in Hippocampal CA2 by Limiting Postsynaptic Calcium Signaling. Eneuro. 5. PMID 29911178 DOI: 10.1523/ENEURO.0353-17.2018  0.837
2018 Tyssowski KM, DeStefino NR, Cho JH, Dunn CJ, Poston RG, Carty CE, Jones RD, Chang SM, Romeo P, Wurzelmann MK, Ward JM, Andermann ML, Saha RN, Dudek SM, Gray JM. Different Neuronal Activity Patterns Induce Different Gene Expression Programs. Neuron. PMID 29681534 DOI: 10.1016/J.Neuron.2018.04.001  0.754
2018 Evans PR, Gerber KJ, Dammer EB, Duong DM, Goswami D, Lustberg DJ, Zou J, Yang JJ, Dudek SM, Griffin PR, Seyfried NT, Hepler JR. Interactome Analysis Reveals Regulator of G Protein Signaling 14 (RGS14) is a Novel Calcium/Calmodulin (Ca2+/CaM) and CaM Kinase II (CaMKII) Binding Partner. Journal of Proteome Research. PMID 29518331 DOI: 10.1021/Acs.Jproteome.8B00027  0.83
2018 Alexander GM, Brown LY, Farris S, Lustberg D, Pantazis C, Gloss B, Plummer NW, Jensen P, Dudek SM. Author response: CA2 neuronal activity controls hippocampal low gamma and ripple oscillations Elife. DOI: 10.7554/Elife.38052.033  0.822
2017 Gu Z, Alexander GM, Dudek SM, Yakel JL. Hippocampus and Entorhinal Cortex Recruit Cholinergic and NMDA Receptors Separately to Generate Hippocampal Theta Oscillations. Cell Reports. 21: 3585-3595. PMID 29262336 DOI: 10.1016/J.Celrep.2017.11.080  0.614
2017 Dunn CJ, Sarkar P, Bailey ER, Farris S, Zhao M, Ward JM, Dudek SM, Saha RN. Histone Hypervariants H2A.Z.1 and H2A.Z.2 Play Independent and Context-Specific Roles in Neuronal Activity-Induced Transcription of Arc/Arg3.1 and Other Immediate Early Genes. Eneuro. 4. PMID 28856239 DOI: 10.1523/ENEURO.0040-17.2017  0.759
2017 Farris S, Wang Y, Ward JM, Dudek SM. Optimized Method for Robust Transcriptome Profiling of Minute Tissues Using Laser Capture Microdissection and Low-Input RNA-Seq. Frontiers in Molecular Neuroscience. 10: 185. PMID 28659759 DOI: 10.3389/Fnmol.2017.00185  0.516
2017 Marron Fernandez de Velasco E, Zhang L, N Vo B, Tipps M, Farris S, Xia Z, Anderson A, Carlblom N, Weaver CD, Dudek SM, Wickman K. GIRK2 splice variants and neuronal G protein-gated K(+) channels: implications for channel function and behavior. Scientific Reports. 7: 1639. PMID 28487514 DOI: 10.1038/S41598-017-01820-2  0.653
2016 Henson MA, Tucker CJ, Zhao M, Dudek SM. Long-term depression-associated signaling is required for an in vitro model of NMDA receptor-dependent synapse pruning. Neurobiology of Learning and Memory. PMID 27794462 DOI: 10.1016/j.nlm.2016.10.013  0.631
2016 Carstens KE, Phillips ML, Pozzo-Miller L, Weinberg RJ, Dudek SM. Perineuronal Nets Suppress Plasticity of Excitatory Synapses on CA2 Pyramidal Neurons. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 36: 6312-20. PMID 27277807 DOI: 10.1523/Jneurosci.0245-16.2016  0.589
2016 Sciolino NR, Plummer NW, Chen YW, Alexander GM, Robertson SD, Dudek SM, McElligott ZA, Jensen P. Recombinase-Dependent Mouse Lines for Chemogenetic Activation of Genetically Defined Cell Types. Cell Reports. PMID 27264177 DOI: 10.1016/J.Celrep.2016.05.034  0.604
2016 Dudek SM, Alexander GM, Farris S. Rediscovering area CA2: unique properties and functions. Nature Reviews. Neuroscience. 17: 89-102. PMID 26806628 DOI: 10.1038/Nrn.2015.22  0.78
2016 Alexander GM, Farris S, Pirone JR, Zheng C, Colgin LL, Dudek SM. Social and novel contexts modify hippocampal CA2 representations of space. Nature Communications. 7: 10300. PMID 26806606 DOI: 10.1038/Ncomms10300  0.766
2015 Evans PR, Dudek SM, Hepler JR. Regulator of G Protein Signaling 14: A Molecular Brake on Synaptic Plasticity Linked to Learning and Memory. Progress in Molecular Biology and Translational Science. 133: 169-206. PMID 26123307 DOI: 10.1016/Bs.Pmbts.2015.03.006  0.824
2015 Pagani JH, Zhao M, Cui Z, Avram SK, Caruana DA, Dudek SM, Young WS. Role of the vasopressin 1b receptor in rodent aggressive behavior and synaptic plasticity in hippocampal area CA2. Molecular Psychiatry. 20: 490-9. PMID 24863146 DOI: 10.1038/mp.2014.47  0.815
2015 Evans PR, Dudek SM, Hepler JR. Regulator of G Protein Signaling 14: A Molecular Brake on Synaptic Plasticity Linked to Learning and Memory Progress in Molecular Biology and Translational Science. 133: 169-206. DOI: 10.1016/bs.pmbts.2015.03.006  0.766
2015 Farris S, Dudek SM. From where? synaptic tagging allows the nucleus not to care Synaptic Tagging and Capture: From Synapses to Behavior. 143-153. DOI: 10.1007/978-1-4939-1761-7_9  0.535
2013 Saha RN, Dudek SM. Splitting hares and tortoises: a classification of neuronal immediate early gene transcription based on poised RNA polymerase II. Neuroscience. 247: 175-81. PMID 23711585 DOI: 10.1016/J.Neuroscience.2013.04.064  0.658
2013 Arce FT, Meckes B, Camp SM, Garcia JG, Dudek SM, Lal R. Heterogeneous elastic response of human lung microvascular endothelial cells to barrier modulating stimuli. Nanomedicine : Nanotechnology, Biology, and Medicine. 9: 875-84. PMID 23523769 DOI: 10.1016/j.nano.2013.03.006  0.347
2012 Caruana DA, Alexander GM, Dudek SM. New insights into the regulation of synaptic plasticity from an unexpected place: hippocampal area CA2. Learning & Memory (Cold Spring Harbor, N.Y.). 19: 391-400. PMID 22904370 DOI: 10.1101/Lm.025304.111  0.811
2012 Simons SB, Caruana DA, Zhao M, Dudek SM. Caffeine-induced synaptic potentiation in hippocampal CA2 neurons. Nature Neuroscience. 15: 23-5. PMID 22101644 DOI: 10.1038/nn.2962  0.744
2011 Vellano CP, Lee SE, Dudek SM, Hepler JR. RGS14 at the interface of hippocampal signaling and synaptic plasticity. Trends in Pharmacological Sciences. 32: 666-74. PMID 21906825 DOI: 10.1016/J.Tips.2011.07.005  0.788
2011 Saha RN, Wissink EM, Bailey ER, Zhao M, Fargo DC, Hwang JY, Daigle KR, Fenn JD, Adelman K, Dudek SM. Rapid activity-induced transcription of Arc and other IEGs relies on poised RNA polymerase II. Nature Neuroscience. 14: 848-56. PMID 21623364 DOI: 10.1038/Nn.2839  0.631
2011 Carlson BR, Lloyd KE, Kruszewski A, Kim IH, Rodriguiz RM, Heindel C, Faytell M, Dudek SM, Wetsel WC, Soderling SH. WRP/srGAP3 facilitates the initiation of spine development by an inverse F-BAR domain, and its loss impairs long-term memory. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 2447-60. PMID 21325512 DOI: 10.1523/Jneurosci.4433-10.2011  0.312
2010 Dudek SM, Chiang ET, Camp SM, Guo Y, Zhao J, Brown ME, Singleton PA, Wang L, Desai A, Arce FT, Lal R, Van Eyk JE, Imam SZ, Garcia JG. Abl tyrosine kinase phosphorylates nonmuscle Myosin light chain kinase to regulate endothelial barrier function. Molecular Biology of the Cell. 21: 4042-56. PMID 20861316 DOI: 10.1091/mbc.E09-10-0876  0.391
2010 Lee SE, Simons SB, Heldt SA, Zhao M, Schroeder JP, Vellano CP, Cowan DP, Ramineni S, Yates CK, Feng Y, Smith Y, Sweatt JD, Weinshenker D, Ressler KJ, Dudek SM, et al. RGS14 is a natural suppressor of both synaptic plasticity in CA2 neurons and hippocampal-based learning and memory. Proceedings of the National Academy of Sciences of the United States of America. 107: 16994-8. PMID 20837545 DOI: 10.1073/Pnas.1005362107  0.852
2009 Adams JP, Robinson RA, Hudgins ED, Wissink EM, Dudek SM. NMDA receptor-independent control of transcription factors and gene expression. Neuroreport. 20: 1429-33. PMID 19794318 DOI: 10.1097/WNR.0b013e3283311db6  0.44
2009 Simons SB, Escobedo Y, Yasuda R, Dudek SM. Regional differences in hippocampal calcium handling provide a cellular mechanism for limiting plasticity. Proceedings of the National Academy of Sciences of the United States of America. 106: 14080-4. PMID 19666491 DOI: 10.1073/pnas.0904775106  0.702
2009 Saha RN, Ghosh A, Palencia CA, Fung YK, Dudek SM, Pahan K. TNF-alpha preconditioning protects neurons via neuron-specific up-regulation of CREB-binding protein. Journal of Immunology (Baltimore, Md. : 1950). 183: 2068-78. PMID 19596989 DOI: 10.4049/Jimmunol.0801892  0.705
2009 Birukova AA, Arce FT, Moldobaeva N, Dudek SM, Garcia JG, Lal R, Birukov KG. Endothelial permeability is controlled by spatially defined cytoskeletal mechanics: atomic force microscopy force mapping of pulmonary endothelial monolayer. Nanomedicine : Nanotechnology, Biology, and Medicine. 5: 30-41. PMID 18824415 DOI: 10.1016/j.nano.2008.07.002  0.362
2009 Saha RN, Ghosh A, Palencia CA, Fung YK, Dudek SM, Pahan K. TNF-α preconditioning protects neurons via neuron-specific up-regulation of CREB-binding protein (Journal of Immunology (2009) 183, (2068-2078)) Journal of Immunology. 183: 6030. DOI: 10.4049/jimmunol.0990087  0.701
2008 Arce FT, Whitlock JL, Birukova AA, Birukov KG, Arnsdorf MF, Lal R, Garcia JG, Dudek SM. Regulation of the micromechanical properties of pulmonary endothelium by S1P and thrombin: role of cortactin. Biophysical Journal. 95: 886-94. PMID 18408039 DOI: 10.1529/biophysj.107.127167  0.381
2008 Saha RN, Dudek SM. Action potentials: to the nucleus and beyond. Experimental Biology and Medicine (Maywood, N.J.). 233: 385-93. PMID 18367626 DOI: 10.3181/0709-Mr-241  0.682
2008 Bastrikova N, Gardner GA, Reece JM, Jeromin A, Dudek SM. Synapse elimination accompanies functional plasticity in hippocampal neurons. Proceedings of the National Academy of Sciences of the United States of America. 105: 3123-7. PMID 18287055 DOI: 10.1073/pnas.0800027105  0.465
2008 Welch J, Lu J, Rodriguiz R, Trotta N, Peca J, Ding J, Feliciano C, Chen M, Adams JP, Luo J, Dudek S, Weinberg R, Calakos N, Wetsel W, Feng G. [SY5.1]: Synaptic and circuitry mechanisms of obsessive compulsive‐like behaviors in mice International Journal of Developmental Neuroscience. 26: 835-835. DOI: 10.1016/J.Ijdevneu.2008.09.033  0.432
2008 Adams JP, Robinson RA, Dudek SM. Role of action potentials in regulating gene transcription: Relevance to LTP Transcriptional Regulation by Neuronal Activity: to the Nucleus and Back. 91-110. DOI: 10.1007/978-0-387-73609-9_5  0.338
2007 Zhao M, Choi YS, Obrietan K, Dudek SM. Synaptic plasticity (and the lack thereof) in hippocampal CA2 neurons. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 27: 12025-32. PMID 17978044 DOI: 10.1523/Jneurosci.4094-07.2007  0.572
2007 Welch JM, Lu J, Rodriguiz RM, Trotta NC, Peca J, Ding JD, Feliciano C, Chen M, Adams JP, Luo J, Dudek SM, Weinberg RJ, Calakos N, Wetsel WC, Feng G. Cortico-striatal synaptic defects and OCD-like behaviours in Sapap3-mutant mice. Nature. 448: 894-900. PMID 17713528 DOI: 10.1038/Nature06104  0.439
2007 Robinson RA, Adams JP, Dudek SM. Role of NMDA receptors in Long‐Term Potentiation‐induced modulation of transcription factor binding The Faseb Journal. 21. DOI: 10.1096/fasebj.21.5.a596-g  0.363
2006 Lundquist JJ, Dudek SM. Differential activation of extracellular signal-regulated kinase 1 and a related complex in neuronal nuclei. Brain Cell Biology. 35: 267-81. PMID 18392730 DOI: 10.1007/s11068-008-9018-7  0.392
2005 Adams JP, Dudek SM. Late-phase long-term potentiation: getting to the nucleus. Nature Reviews. Neuroscience. 6: 737-43. PMID 16136174 DOI: 10.1038/nrn1749  0.468
2005 Zhao M, Adams JP, Dudek SM. Pattern-dependent role of NMDA receptors in action potential generation: consequences on extracellular signal-regulated kinase activation. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 25: 7032-9. PMID 16049179 DOI: 10.1523/JNEUROSCI.1579-05.2005  0.51
2002 Dudek SM, Fields RD. Somatic action potentials are sufficient for late-phase LTP-related cell signaling. Proceedings of the National Academy of Sciences of the United States of America. 99: 3962-7. PMID 11891337 DOI: 10.1073/pnas.062510599  0.669
2001 Fields RD, Eshete F, Dudek S, Ozsarac N, Stevens B. Regulation of gene expression by action potentials: dependence on complexity in cellular information processing. Novartis Foundation Symposium. 239: 160-72; discussion 1. PMID 11529310  0.713
2001 Perrett SP, Dudek SM, Eagleman D, Montague PR, Friedlander MJ. LTD induction in adult visual cortex: role of stimulus timing and inhibition. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 21: 2308-19. PMID 11264306 DOI: 10.1523/Jneurosci.21-07-02308.2001  0.671
2001 Dudek SM, Fields RD. Mitogen-activated protein kinase/extracellular signal-regulated kinase activation in somatodendritic compartments: roles of action potentials, frequency, and mode of calcium entry. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 21: RC122. PMID 11160456 DOI: 10.1523/Jneurosci.21-02-J0002.2001  0.688
1999 Dudek SM, Fields RD. Gene Expression in Hippocampal Long-Term Potentiation. The Neuroscientist : a Review Journal Bringing Neurobiology, Neurology and Psychiatry. 5: 275-279. PMID 31467474 DOI: 10.1177/107385849900500512  0.425
1999 Dudek SM, Fields RD. Gene expression in hippocampal long-term potentiation Neuroscientist. 5: 275-279. DOI: 10.1177/107385849900500512  0.534
1997 Davis PK, Dudek SM, Johnson GV. Select alterations in protein kinases and phosphatases during apoptosis of differentiated PC12 cells. Journal of Neurochemistry. 68: 2338-47. PMID 9166726 DOI: 10.1046/j.1471-4159.1997.68062338.x  0.3
1996 Dudek SM. A discussion of activity-dependent forms of synaptic weakening and their possible role in ocular dominance plasticity. Journal of Physiology, Paris. 90: 167-70. PMID 9116661 DOI: 10.1016/S0928-4257(97)81417-9  0.409
1996 Friedlander MJ, Harsanyi K, Dudek S, Kara P. Developmental mechanisms for regulating signal amplification at excitatory synapses in the neocortex. Progress in Brain Research. 108: 245-62. PMID 8979806 DOI: 10.1016/S0079-6123(08)62544-3  0.701
1996 Dudek SM, Friedlander MJ. Intracellular blockade of inhibitory synaptic responses in visual cortical layer IV neurons. Journal of Neurophysiology. 75: 2167-73. PMID 8734614 DOI: 10.1152/Jn.1996.75.5.2167  0.52
1996 Dudek SM, Friedlander MJ. Developmental down-regulation of LTD in cortical layer IV and its independence of modulation by inhibition. Neuron. 16: 1097-106. PMID 8663986 DOI: 10.1016/S0896-6273(00)80136-1  0.503
1993 Kirkwood A, Dudek SM, Gold JT, Aizenman CD, Bear MF. Common forms of synaptic plasticity in the hippocampus and neocortex in vitro. Science (New York, N.Y.). 260: 1518-21. PMID 8502997 DOI: 10.1126/Science.8502997  0.727
1993 Dudek SM, Bear MF. Bidirectional long-term modification of synaptic effectiveness in the adult and immature hippocampus. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 13: 2910-8. PMID 8331379 DOI: 10.1523/Jneurosci.13-07-02910.1993  0.632
1992 Dudek SM, Bear MF. Homosynaptic long-term depression in area CA1 of hippocampus and effects of N-methyl-D-aspartate receptor blockade. Proceedings of the National Academy of Sciences of the United States of America. 89: 4363-7. PMID 1350090 DOI: 10.1073/Pnas.89.10.4363  0.648
1992 Bohner AP, Dudek SM, Bear MF. Effects of N-methyl-D-aspartate on quisqualate-stimulated phosphoinositide hydrolysis in slices of kitten striate cortex. Brain Research. 594: 146-9. PMID 1334763 DOI: 10.1016/0006-8993(92)91040-L  0.517
1991 Bear MF, Dudek SM. Stimulation of phosphoinositide turnover by excitatory amino acids. Pharmacology, development, and role in visual cortical plasticity. Annals of the New York Academy of Sciences. 627: 42-56. PMID 1652918 DOI: 10.1111/j.1749-6632.1991.tb25912.x  0.578
1989 Dudek SM, Bear MF. A biochemical correlate of the critical period for synaptic modification in the visual cortex. Science (New York, N.Y.). 246: 673-5. PMID 2573152 DOI: 10.1126/Science.2573152  0.536
1989 Dudek SM, Bowen WD, Bear MF. Postnatal changes in glutamate stimulated phosphoinositide turnover in rat neocortical synaptoneurosomes. Brain Research. Developmental Brain Research. 47: 123-8. PMID 2567641 DOI: 10.1016/0165-3806(89)90114-4  0.528
1989 Thibault O, Joly M, Muller D, Schottler F, Dudek S, Lynch G. Long-lasting physiological effects of bath applied N-methyl-d-aspartate Brain Research. 476: 170-173. PMID 2563332 DOI: 10.1016/0006-8993(89)91553-9  0.52
1987 Seubert P, Baudry M, Dudek S, Lynch G. Calmodulin stimulates the degradation of brain spectrin by calpain. Synapse (New York, N.Y.). 1: 20-4. PMID 2850618 DOI: 10.1002/syn.890010105  0.505
Low-probability matches (unlikely to be authored by this person)
1995 Dudek SM, Johnson GV. Postnatal changes in serine/threonine protein phosphatases and their association with the microtubules. Brain Research. Developmental Brain Research. 90: 54-61. PMID 8719329 DOI: 10.1016/0165-3806(96)83486-9  0.28
2015 Song S, Jacobson KN, McDermott KM, Reddy SP, Cress AE, Tang H, Dudek SM, Black SM, Garcia JG, Makino A, Yuan JX. ATP Promotes Cell Survival Via Regulation of Cytosolic [Ca2+] and Bcl-2/Bax Ratio in Lung Cancer Cells. American Journal of Physiology. Cell Physiology. ajpcell.00092.2015. PMID 26491047 DOI: 10.1152/Ajpcell.00092.2015  0.261
2008 Dudek SM. Transcriptional regulation by neuronal activity: To the nucleus and back Transcriptional Regulation by Neuronal Activity: to the Nucleus and Back. 1-425. DOI: 10.1007/978-0-387-73609-9  0.246
1993 Dudek SM, Johnson GV. Transglutaminase catalyzes the formation of sodium dodecyl sulfate-insoluble, Alz-50-reactive polymers of tau. Journal of Neurochemistry. 61: 1159-62. PMID 8103081 DOI: 10.1111/j.1471-4159.1993.tb03636.x  0.227
2005 Adams JP, Hudgins E, Lundquist JJ, Zhao M, Dudek SM. Rapid nuclear responses to action potentials Synaptic Plasticity and Transsynaptic Signaling. 401-418. DOI: 10.1007/0-387-25443-9_23  0.223
1994 Dudek SM, Johnson GV. Transglutaminase facilitates the formation of polymers of the beta-amyloid peptide. Brain Research. 651: 129-33. PMID 7922559 DOI: 10.1016/0006-8993(94)90688-2  0.219
2005 Wadgaonkar R, Dudek SM, Zaiman AL, Linz-McGillem L, Verin AD, Nurmukhambetova S, Romer LH, Garcia JG. Intracellular interaction of myosin light chain kinase with macrophage migration inhibition factor (MIF) in endothelium. Journal of Cellular Biochemistry. 95: 849-58. PMID 15838879 DOI: 10.1002/jcb.20472  0.191
2013 Adyshev DM, Dudek SM, Moldobaeva N, Kim KM, Ma SF, Kasa A, Garcia JG, Verin AD. Ezrin/radixin/moesin proteins differentially regulate endothelial hyperpermeability after thrombin. American Journal of Physiology. Lung Cellular and Molecular Physiology. 305: L240-55. PMID 23729486 DOI: 10.1152/ajplung.00355.2012  0.184
2006 Houl JH, Yu W, Dudek SM, Hardin PE. Drosophila CLOCK is constitutively expressed in circadian oscillator and non-oscillator cells. Journal of Biological Rhythms. 21: 93-103. PMID 16603674 DOI: 10.1177/0748730405283697  0.182
2010 Brown M, Adyshev D, Bindokas V, Moitra J, Garcia JG, Dudek SM. Quantitative distribution and colocalization of non-muscle myosin light chain kinase isoforms and cortactin in human lung endothelium. Microvascular Research. 80: 75-88. PMID 20053363 DOI: 10.1016/j.mvr.2009.12.010  0.163
2005 Finigan JH, Dudek SM, Singleton PA, Chiang ET, Jacobson JR, Camp SM, Ye SQ, Garcia JG. Activated protein C mediates novel lung endothelial barrier enhancement: role of sphingosine 1-phosphate receptor transactivation. The Journal of Biological Chemistry. 280: 17286-93. PMID 15710622 DOI: 10.1074/jbc.M412427200  0.162
2004 Jacobson JR, Dudek SM, Birukov KG, Ye SQ, Grigoryev DN, Girgis RE, Garcia JG. Cytoskeletal activation and altered gene expression in endothelial barrier regulation by simvastatin. American Journal of Respiratory Cell and Molecular Biology. 30: 662-70. PMID 14630613 DOI: 10.1165/rcmb.2003-0267OC  0.153
2011 Adyshev DM, Moldobaeva NK, Elangovan VR, Garcia JG, Dudek SM. Differential involvement of ezrin/radixin/moesin proteins in sphingosine 1-phosphate-induced human pulmonary endothelial cell barrier enhancement. Cellular Signalling. 23: 2086-96. PMID 21864676 DOI: 10.1016/j.cellsig.2011.08.003  0.153
2002 Dudek SM, Birukov KG, Zhan X, Garcia JG. Novel interaction of cortactin with endothelial cell myosin light chain kinase. Biochemical and Biophysical Research Communications. 298: 511-9. PMID 12408982 DOI: 10.1016/S0006-291X(02)02492-0  0.15
2016 Wang T, Mathew B, Wu X, Shimizu Y, Rizzo AN, Dudek SM, Weichselbaum RR, Jacobson JR, Hecker L, Garcia JG. Nonmuscle myosin light chain kinase activity modulates radiation-induced lung injury. Pulmonary Circulation. 6: 234-9. PMID 27252850 DOI: 10.1086/686491  0.132
2003 Bogatcheva NV, Dudek SM, Garcia JG, Verin AD. Mitogen-activated protein kinases in endothelial pathophysiology. Journal of Investigative Medicine : the Official Publication of the American Federation For Clinical Research. 51: 341-52. PMID 14686637  0.132
2004 Dudek SM, Jacobson JR, Chiang ET, Birukov KG, Wang P, Zhan X, Garcia JG. Pulmonary endothelial cell barrier enhancement by sphingosine 1-phosphate: roles for cortactin and myosin light chain kinase. The Journal of Biological Chemistry. 279: 24692-700. PMID 15056655 DOI: 10.1074/jbc.M313969200  0.131
2002 Birukov KG, Birukova AA, Dudek SM, Verin AD, Crow MT, Zhan X, DePaola N, Garcia JG. Shear stress-mediated cytoskeletal remodeling and cortactin translocation in pulmonary endothelial cells. American Journal of Respiratory Cell and Molecular Biology. 26: 453-64. PMID 11919082 DOI: 10.1165/Ajrcmb.26.4.4725  0.13
2011 Bush WS, McCauley JL, DeJager PL, Dudek SM, Hafler DA, Gibson RA, Matthews PM, Kappos L, Naegelin Y, Polman CH, Hauser SL, Oksenberg J, Haines JL, Ritchie MD. A knowledge-driven interaction analysis reveals potential neurodegenerative mechanism of multiple sclerosis susceptibility. Genes and Immunity. 12: 335-40. PMID 21346779 DOI: 10.1038/Gene.2011.3  0.129
2003 Glossop NR, Houl JH, Zheng H, Ng FS, Dudek SM, Hardin PE. VRILLE feeds back to control circadian transcription of Clock in the Drosophila circadian oscillator. Neuron. 37: 249-61. PMID 12546820 DOI: 10.1016/S0896-6273(03)00002-3  0.128
2009 Berdyshev EV, Gorshkova I, Skobeleva A, Bittman R, Lu X, Dudek SM, Mirzapoiazova T, Garcia JG, Natarajan V. FTY720 inhibits ceramide synthases and up-regulates dihydrosphingosine 1-phosphate formation in human lung endothelial cells. The Journal of Biological Chemistry. 284: 5467-77. PMID 19119142 DOI: 10.1074/Jbc.M805186200  0.128
2001 Dudek SM, Garcia JG. Cytoskeletal regulation of pulmonary vascular permeability. Journal of Applied Physiology (Bethesda, Md. : 1985). 91: 1487-500. PMID 11568129  0.127
2006 Jacobson JR, Dudek SM, Singleton PA, Kolosova IA, Verin AD, Garcia JG. Endothelial cell barrier enhancement by ATP is mediated by the small GTPase Rac and cortactin. American Journal of Physiology. Lung Cellular and Molecular Physiology. 291: L289-95. PMID 16825658 DOI: 10.1152/ajplung.00343.2005  0.124
2007 Usatyuk PV, Romer LH, He D, Parinandi NL, Kleinberg ME, Zhan S, Jacobson JR, Dudek SM, Pendyala S, Garcia JG, Natarajan V. Regulation of hyperoxia-induced NADPH oxidase activation in human lung endothelial cells by the actin cytoskeleton and cortactin. The Journal of Biological Chemistry. 282: 23284-95. PMID 17562703 DOI: 10.1074/jbc.M700535200  0.122
2011 Mathew B, Huang Y, Jacobson JR, Berdyshev E, Gerhold LM, Wang T, Moreno-Vinasco L, Lang G, Zhao Y, Chen CT, LaRiviere PJ, Mauceri H, Sammani S, Husain AN, Dudek SM, et al. Simvastatin attenuates radiation-induced murine lung injury and dysregulated lung gene expression. American Journal of Respiratory Cell and Molecular Biology. 44: 415-22. PMID 20508068 DOI: 10.1165/Rcmb.2010-0122Oc  0.121
2024 Siegler PN, Shaughnessy EK, Horman B, Vierling TT, King DH, Patisaul HB, Huhman KL, Alexander GM, Dudek SM. Identification of hippocampal area CA2 in hamster and vole brain. The Journal of Comparative Neurology. 532: e25603. PMID 38497661 DOI: 10.1002/cne.25603  0.12
2013 Sun X, Ma SF, Wade MS, Acosta-Herrera M, Villar J, Pino-Yanes M, Zhou T, Liu B, Belvitch P, Moitra J, Han YJ, Machado R, Noth I, Natarajan V, Dudek SM, et al. Functional promoter variants in sphingosine 1-phosphate receptor 3 associate with susceptibility to sepsis-associated acute respiratory distress syndrome. American Journal of Physiology. Lung Cellular and Molecular Physiology. 305: L467-77. PMID 23911438 DOI: 10.1152/ajplung.00010.2013  0.119
2011 Wang L, Chiang ET, Simmons JT, Garcia JG, Dudek SM. FTY720-induced human pulmonary endothelial barrier enhancement is mediated by c-Abl. The European Respiratory Journal. 38: 78-88. PMID 21071472 DOI: 10.1183/09031936.00047810  0.118
2014 Belvitch P, Adyshev D, Elangovan VR, Brown ME, Naureckas C, Rizzo AN, Siegler JH, Garcia JG, Dudek SM. Proline-rich region of non-muscle myosin light chain kinase modulates kinase activity and endothelial cytoskeletal dynamics. Microvascular Research. 95: 94-102. PMID 25072537 DOI: 10.1016/j.mvr.2014.07.007  0.114
2013 Mathew B, Jacobson JR, Siegler JH, Moitra J, Blasco M, Xie L, Unzueta C, Zhou T, Evenoski C, Al-Sakka M, Sharma R, Huey B, Bulent A, Smith B, Jayaraman S, ... ... Dudek SM, et al. Role of migratory inhibition factor in age-related susceptibility to radiation lung injury via NF-E2-related factor-2 and antioxidant regulation. American Journal of Respiratory Cell and Molecular Biology. 49: 269-78. PMID 23526214 DOI: 10.1165/Rcmb.2012-0291Oc  0.112
2015 Shen K, Ramirez B, Mapes B, Shen GR, Gokhale V, Brown ME, Santarsiero B, Ishii Y, Dudek SM, Wang T, Garcia JG. Structure-Function Analysis of the Non-Muscle Myosin Light Chain Kinase (nmMLCK) Isoform by NMR Spectroscopy and Molecular Modeling: Influence of MYLK Variants. Plos One. 10: e0130515. PMID 26111161 DOI: 10.1371/Journal.Pone.0130515  0.111
2009 Zhao J, Singleton PA, Brown ME, Dudek SM, Garcia JG. Phosphotyrosine protein dynamics in cell membrane rafts of sphingosine-1-phosphate-stimulated human endothelium: role in barrier enhancement. Cellular Signalling. 21: 1945-60. PMID 19755153 DOI: 10.1016/j.cellsig.2009.09.002  0.111
2006 Singleton PA, Dudek SM, Ma SF, Garcia JG. Transactivation of sphingosine 1-phosphate receptors is essential for vascular barrier regulation. Novel role for hyaluronan and CD44 receptor family. The Journal of Biological Chemistry. 281: 34381-93. PMID 16963454 DOI: 10.1074/jbc.M603680200  0.111
2009 Chiang ET, Camp SM, Dudek SM, Brown ME, Usatyuk PV, Zaborina O, Alverdy JC, Garcia JG. Protective effects of high-molecular weight polyethylene glycol (PEG) in human lung endothelial cell barrier regulation: role of actin cytoskeletal rearrangement. Microvascular Research. 77: 174-86. PMID 19121327 DOI: 10.1016/j.mvr.2008.11.007  0.11
2007 Dudek SM, Camp SM, Chiang ET, Singleton PA, Usatyuk PV, Zhao Y, Natarajan V, Garcia JG. Pulmonary endothelial cell barrier enhancement by FTY720 does not require the S1P1 receptor. Cellular Signalling. 19: 1754-64. PMID 17475445 DOI: 10.1016/j.cellsig.2007.03.011  0.108
1995 Dudek SM, Semenkovich CF. Essential amino acids regulate fatty acid synthase expression through an uncharged transfer RNA-dependent mechanism. The Journal of Biological Chemistry. 270: 29323-9. PMID 7493965 DOI: 10.1074/Jbc.270.49.29323  0.108
2011 Mathew B, Jacobson JR, Berdyshev E, Huang Y, Sun X, Zhao Y, Gerhold LM, Siegler J, Evenoski C, Wang T, Zhou T, Zaidi R, Moreno-Vinasco L, Bittman R, Chen CT, ... ... Dudek SM, et al. Role of sphingolipids in murine radiation-induced lung injury: protection by sphingosine 1-phosphate analogs. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 25: 3388-400. PMID 21712494 DOI: 10.1096/Fj.11-183970  0.108
2007 Nonas SA, Moreno-Vinasco L, Vinasco LM, Ma SF, Jacobson JR, Desai AA, Dudek SM, Flores C, Hassoun PM, Sam L, Ye SQ, Moitra J, Barnard J, Grigoryev DN, Lussier YA, et al. Use of consomic rats for genomic insights into ventilator-associated lung injury. American Journal of Physiology. Lung Cellular and Molecular Physiology. 293: L292-302. PMID 17468131 DOI: 10.1152/Ajplung.00481.2006  0.105
2014 Wang T, Moreno-Vinasco L, Ma SF, Zhou T, Shimizu Y, Sammani S, Epshtein Y, Watterson DM, Dudek SM, Garcia JG. Nonmuscle myosin light chain kinase regulates murine asthmatic inflammation. American Journal of Respiratory Cell and Molecular Biology. 50: 1129-35. PMID 24428690 DOI: 10.1165/Rcmb.2013-0434Oc  0.105
2009 Camp SM, Bittman R, Chiang ET, Moreno-Vinasco L, Mirzapoiazova T, Sammani S, Lu X, Sun C, Harbeck M, Roe M, Natarajan V, Garcia JG, Dudek SM. Synthetic analogs of FTY720 [2-amino-2-(2-[4-octylphenyl]ethyl)-1,3-propanediol] differentially regulate pulmonary vascular permeability in vivo and in vitro. The Journal of Pharmacology and Experimental Therapeutics. 331: 54-64. PMID 19592667 DOI: 10.1124/Jpet.109.153544  0.104
2012 Usatyuk PV, Singleton PA, Pendyala S, Kalari SK, He D, Gorshkova IA, Camp SM, Moitra J, Dudek SM, Garcia JG, Natarajan V. Novel role for non-muscle myosin light chain kinase (MLCK) in hyperoxia-induced recruitment of cytoskeletal proteins, NADPH oxidase activation, and reactive oxygen species generation in lung endothelium. The Journal of Biological Chemistry. 287: 9360-75. PMID 22219181 DOI: 10.1074/jbc.M111.294546  0.103
2014 Holzinger ER, Dudek SM, Frase AT, Pendergrass SA, Ritchie MD. ATHENA: the analysis tool for heritable and environmental network associations. Bioinformatics (Oxford, England). 30: 698-705. PMID 24149050 DOI: 10.1093/Bioinformatics/Btt572  0.101
2014 Usatyuk PV, Fu P, Mohan V, Epshtein Y, Jacobson JR, Gomez-Cambronero J, Wary KK, Bindokas V, Dudek SM, Salgia R, Garcia JG, Natarajan V. Role of c-Met/phosphatidylinositol 3-kinase (PI3k)/Akt signaling in hepatocyte growth factor (HGF)-mediated lamellipodia formation, reactive oxygen species (ROS) generation, and motility of lung endothelial cells. The Journal of Biological Chemistry. 289: 13476-91. PMID 24634221 DOI: 10.1074/Jbc.M113.527556  0.101
2011 Mitra S, Sammani S, Wang T, Boone DL, Meyer NJ, Dudek SM, Moreno-Vinasco L, Garcia JG, Jacobson JR. Role of growth arrest and DNA damage-inducible α in Akt phosphorylation and ubiquitination after mechanical stress-induced vascular injury. American Journal of Respiratory and Critical Care Medicine. 184: 1030-40. PMID 21816939 DOI: 10.1164/Rccm.201103-0447Oc  0.101
2012 Sun X, Singleton PA, Letsiou E, Zhao J, Belvitch P, Sammani S, Chiang ET, Moreno-Vinasco L, Wade MS, Zhou T, Liu B, Parastatidis I, Thomson L, Ischiropoulos H, Natarajan V, ... ... Dudek SM, et al. Sphingosine-1-phosphate receptor-3 is a novel biomarker in acute lung injury. American Journal of Respiratory Cell and Molecular Biology. 47: 628-36. PMID 22771388 DOI: 10.1165/Rcmb.2012-0048Oc  0.101
2015 Camp SM, Chiang ET, Sun C, Usatyuk PV, Bittman R, Natarajan V, Garcia JG, Dudek SM. Reprint of "Pulmonary Endothelial Cell Barrier Enhancement by Novel FTY720 Analogs: Methoxy-FTY720, Fluoro-FTY720, and β-Glucuronide-FTY720". Chemistry and Physics of Lipids. PMID 26496151 DOI: 10.1016/j.chemphyslip.2015.10.004  0.1
2015 Camp SM, Chiang ET, Sun C, Usatyuk PV, Bittman R, Natarajan V, Garcia JG, Dudek SM. Pulmonary Endothelial Cell Barrier Enhancement by Novel FTY720 Analogs: Methoxy-FTY720, Fluoro-FTY720, and β-Glucuronide-FTY720. Chemistry and Physics of Lipids. 191: 16-24. PMID 26272033 DOI: 10.1016/J.Chemphyslip.2015.08.004  0.1
2009 Wang L, Dudek SM. Regulation of vascular permeability by sphingosine 1-phosphate. Microvascular Research. 77: 39-45. PMID 18973762 DOI: 10.1016/j.mvr.2008.09.005  0.099
2011 Ma SF, Xie L, Pino-Yanes M, Sammani S, Wade MS, Letsiou E, Siegler J, Wang T, Infusino G, Kittles RA, Flores C, Zhou T, Prabhakar BS, Moreno-Vinasco L, Villar J, ... ... Dudek SM, et al. Type 2 deiodinase and host responses of sepsis and acute lung injury. American Journal of Respiratory Cell and Molecular Biology. 45: 1203-11. PMID 21685153 DOI: 10.1165/Rcmb.2011-0179Oc  0.099
2015 Rizzo AN, Aman J, van Nieuw Amerongen GP, Dudek SM. Targeting Abl kinases to regulate vascular leak during sepsis and acute respiratory distress syndrome. Arteriosclerosis, Thrombosis, and Vascular Biology. 35: 1071-9. PMID 25814671 DOI: 10.1161/ATVBAHA.115.305085  0.099
2001 Dudek SM. Multidimensional gene expression in cortical space Developmental Science. 4: 145-146.  0.097
2015 Choi S, Camp SM, Dan A, Garcia JG, Dudek SM, Leckband D. A Genetic Variant of Cortactin Linked to Acute Lung Injury Impairs Lamellipodia Dynamics and Endothelial Wound Healing. American Journal of Physiology. Lung Cellular and Molecular Physiology. ajplung.00062.2015. PMID 26361873 DOI: 10.1152/Ajplung.00062.2015  0.096
2016 Hohman TJ, Bush WS, Jiang L, Brown-Gentry KD, Torstenson ES, Dudek SM, Mukherjee S, Naj A, Kunkle BW, Ritchie MD, Martin ER, Schellenberg GD, Mayeux R, Farrer LA, Pericak-Vance MA, et al. Discovery of gene-gene interactions across multiple independent data sets of late onset Alzheimer disease from the Alzheimer Disease Genetics Consortium. Neurobiology of Aging. 38: 141-50. PMID 26827652 DOI: 10.1016/J.Neurobiolaging.2015.10.031  0.096
2013 Ephstein Y, Singleton PA, Chen W, Wang L, Salgia R, Kanteti P, Dudek SM, Garcia JG, Jacobson JR. Critical role of S1PR1 and integrin β4 in HGF/c-Met-mediated increases in vascular integrity. The Journal of Biological Chemistry. 288: 2191-200. PMID 23212923 DOI: 10.1074/Jbc.M112.404780  0.095
2014 Kim D, Li R, Dudek SM, Frase AT, Pendergrass SA, Ritchie MD. Knowledge-driven genomic interactions: an application in ovarian cancer. Biodata Mining. 7: 20. PMID 25214892 DOI: 10.1186/1756-0381-7-20  0.095
2012 Belvitch P, Dudek SM. Role of FAK in S1P-regulated endothelial permeability. Microvascular Research. 83: 22-30. PMID 21925517 DOI: 10.1016/j.mvr.2011.08.012  0.094
2005 Singleton PA, Dudek SM, Chiang ET, Garcia JG. Regulation of sphingosine 1-phosphate-induced endothelial cytoskeletal rearrangement and barrier enhancement by S1P1 receptor, PI3 kinase, Tiam1/Rac1, and alpha-actinin. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 19: 1646-56. PMID 16195373 DOI: 10.1096/fj.05-3928com  0.093
2009 Muñoz NM, Meliton AY, Meliton LN, Dudek SM, Leff AR. Secretory group V phospholipase A2 regulates acute lung injury and neutrophilic inflammation caused by LPS in mice. American Journal of Physiology. Lung Cellular and Molecular Physiology. 296: L879-87. PMID 19286925 DOI: 10.1152/ajplung.90580.2008  0.09
2008 Motsinger-Reif AA, Dudek SM, Hahn LW, Ritchie MD. Comparison of approaches for machine-learning optimization of neural networks for detecting gene-gene interactions in genetic epidemiology. Genetic Epidemiology. 32: 325-40. PMID 18265411 DOI: 10.1002/Gepi.20307  0.089
2010 Sammani S, Moreno-Vinasco L, Mirzapoiazova T, Singleton PA, Chiang ET, Evenoski CL, Wang T, Mathew B, Husain A, Moitra J, Sun X, Nunez L, Jacobson JR, Dudek SM, Natarajan V, et al. Differential effects of sphingosine 1-phosphate receptors on airway and vascular barrier function in the murine lung. American Journal of Respiratory Cell and Molecular Biology. 43: 394-402. PMID 19749179 DOI: 10.1165/Rcmb.2009-0223Oc  0.088
2006 Motsinger AA, Reif DM, Dudek SM, Ritchie MD. Understanding the Evolutionary Process of Grammatical Evolution Neural Networks for Feature Selection in Genetic Epidemiology. Proceedings of the ... Ieee Symposium On Computational Intelligence in Bioinformatics and Computational Biology. Ieee Symposium On Computational Intelligence in Bioinformatics and Computational Biology. 2006: 1-8. PMID 20634919 DOI: 10.1109/CIBCB.2006.330945  0.088
2011 Mirzapoiazova T, Moitra J, Moreno-Vinasco L, Sammani S, Turner JR, Chiang ET, Evenoski C, Wang T, Singleton PA, Huang Y, Lussier YA, Watterson DM, Dudek SM, Garcia JG. Non-muscle myosin light chain kinase isoform is a viable molecular target in acute inflammatory lung injury. American Journal of Respiratory Cell and Molecular Biology. 44: 40-52. PMID 20139351 DOI: 10.1165/Rcmb.2009-0197Oc  0.087
2009 Sun X, Shikata Y, Wang L, Ohmori K, Watanabe N, Wada J, Shikata K, Birukov KG, Makino H, Jacobson JR, Dudek SM, Garcia JG. Enhanced interaction between focal adhesion and adherens junction proteins: involvement in sphingosine 1-phosphate-induced endothelial barrier enhancement. Microvascular Research. 77: 304-13. PMID 19323978 DOI: 10.1016/j.mvr.2008.12.004  0.087
2004 Li Y, Uruno T, Haudenschild C, Dudek SM, Garcia JG, Zhan X. Interaction of cortactin and Arp2/3 complex is required for sphingosine-1-phosphate-induced endothelial cell remodeling. Experimental Cell Research. 298: 107-21. PMID 15242766 DOI: 10.1016/j.yexcr.2004.03.023  0.086
2010 Meliton AY, Muñoz NM, Meliton LN, Binder DC, Osan CM, Zhu X, Dudek SM, Leff AR. Cytosolic group IVa phospholipase A2 mediates IL-8/CXCL8-induced transmigration of human polymorphonuclear leukocytes in vitro. Journal of Inflammation (London, England). 7: 14. PMID 20298597 DOI: 10.1186/1476-9255-7-14  0.085
2010 Holzinger ER, Buchanan CC, Dudek SM, Torstenson EC, Turner SD, Ritchie MD. Initialization Parameter Sweep in ATHENA: Optimizing Neural Networks for Detecting Gene-Gene Interactions in the Presence of Small Main Effects. Genetic and Evolutionary Computation Conference : [Proceedings] / Sponsored by Acm Sigevo. Genetic and Evolutionary Computation Conference. 12: 203-210. PMID 21152364 DOI: 10.1145/1830483.1830519  0.084
2006 Motsinger AA, Dudek SM, Hahn LW, Ritchie MD. Comparison of neural network optimization approaches for studies of human genetics Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 3907: 103-114. DOI: 10.1007/11732242_10  0.084
2010 Turner SD, Dudek SM, Ritchie MD. ATHENA: A knowledge-based hybrid backpropagation-grammatical evolution neural network algorithm for discovering epistasis among quantitative trait Loci. Biodata Mining. 3: 5. PMID 20875103 DOI: 10.1186/1756-0381-3-5  0.083
2011 Dudek SM, Muñoz NM, Desai A, Osan CM, Meliton AY, Leff AR. Group V phospholipase A2 mediates barrier disruption of human pulmonary endothelial cells caused by LPS in vitro. American Journal of Respiratory Cell and Molecular Biology. 44: 361-8. PMID 20448053 DOI: 10.1165/rcmb.2009-0446OC  0.082
2015 Pendergrass SA, Verma SS, Hall MA, Holzinger ER, Moore CB, Wallace JR, Dudek SM, Huggins W, Kitchner T, Waudby C, Berg R, Mccarty CA, Ritchie MD. Next-generation analysis of cataracts: determining knowledge driven gene-gene interactions using biofilter, and gene-environment interactions using the Phenx Toolkit*. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 495-505. PMID 25741542  0.082
2011 Cattaert T, Calle ML, Dudek SM, Mahachie John JM, Van Lishout F, Urrea V, Ritchie MD, Van Steen K. Model-based multifactor dimensionality reduction for detecting epistasis in case-control data in the presence of noise. Annals of Human Genetics. 75: 78-89. PMID 21158747 DOI: 10.1111/J.1469-1809.2010.00604.X  0.082
2013 Pendergrass SA, Verma SS, Holzinger ER, Moore CB, Wallace J, Dudek SM, Huggins W, Kitchner T, Waudby C, Berg R, McCarty CA, Ritchie MD. Next-generation analysis of cataracts: determining knowledge driven gene-gene interactions using Biofilter, and gene-environment interactions using the PhenX Toolkit. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 147-58. PMID 23424120  0.08
2008 Ma SF, Flores C, Wade MS, Dudek SM, Nicolae DL, Ober C, Garcia JG. A common cortactin gene variation confers differential susceptibility to severe asthma. Genetic Epidemiology. 32: 757-66. PMID 18521921 DOI: 10.1002/gepi.20343  0.08
2013 von Maravic P, Dudek SM. Representative bureaucracy in Germany? From passive to active intercultural opening Representative Bureaucracy in Action: Country Profiles From the Americas, Europe, Africa and Asia. 99-110. DOI: 10.4337/9780857935984.00013  0.08
2015 Letsiou E, Rizzo AN, Sammani S, Naureckas P, Jacobson JR, Garcia JG, Dudek SM. Differential and opposing effects of imatinib on LPS- and ventilator-induced lung injury. American Journal of Physiology. Lung Cellular and Molecular Physiology. 308: L259-69. PMID 25480336 DOI: 10.1152/ajplung.00323.2014  0.079
2013 Kim D, Li R, Dudek SM, Ritchie MD. ATHENA: Identifying interactions between different levels of genomic data associated with cancer clinical outcomes using grammatical evolution neural network. Biodata Mining. 6: 23. PMID 24359638 DOI: 10.1186/1756-0381-6-23  0.079
2006 Dudek SM, Motsinger AA, Velez DR, Williams SM, Ritchie MD. Data simulation software for whole-genome association and other studies in human genetics. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 499-510. PMID 17094264  0.073
2005 Bogatcheva NV, Sergeeva MG, Dudek SM, Verin AD. Arachidonic acid cascade in endothelial pathobiology. Microvascular Research. 69: 107-27. PMID 15896353 DOI: 10.1016/j.mvr.2005.01.007  0.073
2012 Mekontso Dessap A, Voiriot G, Zhou T, Marcos E, Dudek SM, Jacobson JR, Machado R, Adnot S, Brochard L, Maitre B, Garcia JG. Conflicting physiological and genomic cardiopulmonary effects of recruitment maneuvers in murine acute lung injury. American Journal of Respiratory Cell and Molecular Biology. 46: 541-50. PMID 22135358 DOI: 10.1165/rcmb.2011-0306OC  0.072
2006 Bush WS, Dudek SM, Ritchie MD. Parallel multifactor dimensionality reduction: a tool for the large-scale analysis of gene-gene interactions. Bioinformatics (Oxford, England). 22: 2173-4. PMID 16809395 DOI: 10.1093/Bioinformatics/Btl347  0.071
1990 Lee C, Sensibar JA, Dudek SM, Hiipakka RA, Liao ST. Prostatic ductal system in rats: regional variation in morphological and functional activities. Biology of Reproduction. 43: 1079-86. PMID 2291926 DOI: 10.1095/Biolreprod43.6.1079  0.071
2015 Letsiou E, Sammani S, Zhang W, Zhou T, Quijada H, Moreno-Vinasco L, Dudek SM, Garcia JG. Pathologic mechanical stress and endotoxin exposure increases lung endothelial microparticle shedding. American Journal of Respiratory Cell and Molecular Biology. 52: 193-204. PMID 25029266 DOI: 10.1165/rcmb.2013-0347OC  0.069
2015 Wang L, Bittman R, Garcia JG, Dudek SM. Junctional complex and focal adhesion rearrangement mediates pulmonary endothelial barrier enhancement by FTY720 S-phosphonate. Microvascular Research. 99: 102-9. PMID 25862132 DOI: 10.1016/J.Mvr.2015.03.007  0.069
2013 Holzinger ER, Dudek SM, Frase AT, Krauss RM, Medina MW, Ritchie MD. ATHENA: a tool for meta-dimensional analysis applied to genotypes and gene expression data to predict HDL cholesterol levels. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 385-96. PMID 23424143  0.067
2010 Turner SD, Dudek SM, Ritchie MD. Incorporating domain knowledge into evolutionary computing for discovering gene-gene interaction Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 6238: 394-403. DOI: 10.1007/978-3-642-15844-5_40  0.067
2014 Brown MB, Hunt WR, Noe JE, Rush NI, Schweitzer KS, Leece TC, Moldobaeva A, Wagner EM, Dudek SM, Poirier C, Presson RG, Gulbins E, Petrache I. Loss of cystic fibrosis transmembrane conductance regulator impairs lung endothelial cell barrier function and increases susceptibility to microvascular damage from cigarette smoke. Pulmonary Circulation. 4: 260-8. PMID 25006445 DOI: 10.1086/675989  0.066
2009 Bush WS, Dudek SM, Ritchie MD. Biofilter: a knowledge-integration system for the multi-locus analysis of genome-wide association studies. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 368-79. PMID 19209715  0.064
2003 Dudek SM, Garcia JG. Rho family of guanine exchange factors (GEFs) in cellular activation: who's dancing? And with whom? Circulation Research. 93: 794-5. PMID 14592993 DOI: 10.1161/01.RES.0000100844.06166.FF  0.064
2008 Bush WS, Edwards TL, Dudek SM, McKinney BA, Ritchie MD. Alternative contingency table measures improve the power and detection of multifactor dimensionality reduction. Bmc Bioinformatics. 9: 238. PMID 18485205 DOI: 10.1186/1471-2105-9-238  0.062
2008 Schwarz UI, Ritchie MD, Bradford Y, Li C, Dudek SM, Frye-Anderson A, Kim RB, Roden DM, Stein CM. Genetic determinants of response to warfarin during initial anticoagulation. The New England Journal of Medicine. 358: 999-1008. PMID 18322281 DOI: 10.1056/Nejmoa0708078  0.06
2011 Pendergrass SA, Brown-Gentry K, Dudek SM, Torstenson ES, Ambite JL, Avery CL, Buyske S, Cai C, Fesinmeyer MD, Haiman C, Heiss G, Hindorff LA, Hsu CN, Jackson RD, Kooperberg C, et al. The use of phenome-wide association studies (PheWAS) for exploration of novel genotype-phenotype relationships and pleiotropy discovery. Genetic Epidemiology. 35: 410-22. PMID 21594894 DOI: 10.1002/Gepi.20589  0.06
2013 Natarajan V, Dudek SM, Jacobson JR, Moreno-Vinasco L, Huang LS, Abassi T, Mathew B, Zhao Y, Wang L, Bittman R, Weichselbaum R, Berdyshev E, Garcia JG. Sphingosine-1-phosphate, FTY720, and sphingosine-1-phosphate receptors in the pathobiology of acute lung injury. American Journal of Respiratory Cell and Molecular Biology. 49: 6-17. PMID 23449739 DOI: 10.1165/Rcmb.2012-0411Tr  0.06
2008 Hong SB, Huang Y, Moreno-Vinasco L, Sammani S, Moitra J, Barnard JW, Ma SF, Mirzapoiazova T, Evenoski C, Reeves RR, Chiang ET, Lang GD, Husain AN, Dudek SM, Jacobson JR, et al. Essential role of pre-B-cell colony enhancing factor in ventilator-induced lung injury. American Journal of Respiratory and Critical Care Medicine. 178: 605-17. PMID 18658108 DOI: 10.1164/Rccm.200712-1822Oc  0.059
2015 Rizzo AN, Sammani S, Esquinca AE, Jacobson JR, Garcia JG, Letsiou E, Dudek SM. Imatinib attenuates inflammation and vascular leak in a clinically relevant two-hit model of acute lung injury. American Journal of Physiology. Lung Cellular and Molecular Physiology. ajplung.00031.2015. PMID 26432864 DOI: 10.1152/ajplung.00031.2015  0.059
2005 Bush WS, Motsinger AA, Dudek SM, Ritchie MD. Can neural network constraints in GP provide power to detect genes associated with human disease? Lecture Notes in Computer Science. 3449: 44-53.  0.057
2016 Li R, Dudek SM, Kim D, Hall MA, Bradford Y, Peissig PL, Brilliant MH, Linneman JG, McCarty CA, Bao L, Ritchie MD. Identification of genetic interaction networks via an evolutionary algorithm evolved Bayesian network. Biodata Mining. 9: 18. PMID 27168765 DOI: 10.1186/S13040-016-0094-4  0.055
2010 Pendergrass SA, Dudek SM, Crawford DC, Ritchie MD. Synthesis-View: visualization and interpretation of SNP association results for multi-cohort, multi-phenotype data and meta-analysis. Biodata Mining. 3: 10. PMID 21162740 DOI: 10.1186/1756-0381-3-10  0.055
2009 Zhao J, Camp SM, Chiang ET, Schilling AB, Dudek SM, Garcia JGN. Identification of novel in vitro protein kinase A phosphorylation sites on recombinant non-muscle myosin light chain kinase: Nano-liquid chromatography tandem mass spectrometry methodology Journal of Organ Dysfunction. 5: 242-253. DOI: 10.3109/17471060802409712  0.054
2008 Hardison NE, Fanelli TJ, Dudek SM, Reif DM, Ritchie MD, Motsinger-Reif AA. A Balanced Accuracy Fitness Function Leads to Robust Analysis using Grammatical Evolution Neural Networks in the Case of Class Imbalance. Genetic and Evolutionary Computation Conference : [Proceedings] / Sponsored by Acm Sigevo. Genetic and Evolutionary Computation Conference. 2008: 353-354. PMID 21197143 DOI: 10.1145/1389095.1389159  0.054
2014 Hall MA, Dudek SM, Goodloe R, Crawford DC, Pendergrass SA, Peissig P, Brilliant M, McCarty CA, Ritchie MD. Environment-wide association study (EWAS) for type 2 diabetes in the Marshfield Personalized Medicine Research Project Biobank. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 200-11. PMID 24297547  0.053
2011 Pendergrass S, Dudek SM, Roden DM, Crawford DC, Ritchie MD. Visual integration of results from a large DNA biobank (BioVU) using synthesis-view. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 265-75. PMID 21121054  0.051
2014 Li R, Kim D, Dudek SM, Ritchie MD. An integrated analysis of genome-wide DNA Methylation and genetic variants underlying etoposide-induced cytotoxicity in European and African populations Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 8602: 928-938. DOI: 10.1007/978-3-662-45523-4_75  0.049
2010 Edwards TL, Turner SD, Torstenson ES, Dudek SM, Martin ER, Ritchie MD. A general framework for formal tests of interaction after exhaustive search methods with applications to MDR and MDR-PDT. Plos One. 5: e9363. PMID 20186329 DOI: 10.1371/Journal.Pone.0009363  0.047
2015 Kim D, Li R, Dudek SM, Ritchie MD. Predicting censored survival data based on the interactions between meta-dimensional omics data in breast cancer. Journal of Biomedical Informatics. PMID 26048077 DOI: 10.1016/J.Jbi.2015.05.019  0.047
2015 Kim D, Li R, Dudek SM, Wallace JR, Ritchie MD. Binning somatic mutations based on biological knowledge for predicting survival: an application in renal cell carcinoma. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 96-107. PMID 25592572  0.047
2015 Wang X, Bleher R, Brown ME, Garcia JG, Dudek SM, Shekhawat GS, Dravid VP. Nano-Biomechanical Study of Spatio-Temporal Cytoskeleton Rearrangements that Determine Subcellular Mechanical Properties and Endothelial Permeability. Scientific Reports. 5: 11097. PMID 26086333 DOI: 10.1038/Srep11097  0.046
2012 Pendergrass SA, Dudek SM, Crawford DC, Ritchie MD. Visually integrating and exploring high throughput Phenome-Wide Association Study (PheWAS) results using PheWAS-View. Biodata Mining. 5: 5. PMID 22682510 DOI: 10.1186/1756-0381-5-5  0.044
2010 Bush WS, Dudek SM, Ritchie MD. Visualizing SNP statistics in the context of linkage disequilibrium using LD-Plus. Bioinformatics (Oxford, England). 26: 578-9. PMID 20130027 DOI: 10.1093/Bioinformatics/Btp678  0.043
2010 Grady BJ, Torstenson E, Dudek SM, Giles J, Sexton D, Ritchie MD. Finding unique filter sets in PLATO: a precursor to efficient interaction analysis in GWAS data. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 315-26. PMID 19908384  0.04
2014 Wang L, Sammani S, Moreno-Vinasco L, Letsiou E, Wang T, Camp SM, Bittman R, Garcia JG, Dudek SM. FTY720 (s)-phosphonate preserves sphingosine 1-phosphate receptor 1 expression and exhibits superior barrier protection to FTY720 in acute lung injury. Critical Care Medicine. 42: e189-99. PMID 24335440 DOI: 10.1097/Ccm.0000000000000097  0.039
2010 Turner SD, Dudek SM, Ritchie MD. Grammatical evolution of neural networks for discovering epistasis among quantitative trait loci Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 6023: 86-97. DOI: 10.1007/978-3-642-12211-8-8  0.038
2005 Reif DM, Dudek SM, Shaffer CM, Wang J, Moore JH. Exploratory visual analysis of pharmacogenomic results. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 296-307. PMID 15759635  0.036
2006 Moreno L, Dudek SM, Garcia JGN. Sphingolipids and lung vascular barrier regulation Sphingolipid Biology. 403-414. DOI: 10.1007/4-431-34200-1_31  0.034
2011 Holzinger ER, Dudek SM, Torstenson EC, Ritchie MD. ATHENA optimization: The effect of initial parameter settings across different genetic models Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 6623: 48-58. DOI: 10.1007/978-3-642-20389-3_5  0.03
1989 Giger U, Evans SM, Hendrick MJ, Dudek SM. Orthovoltage radiotherapy of primary lymphoma of bone in a dog. Journal of the American Veterinary Medical Association. 195: 627-30. PMID 2777712  0.03
2006 Motsinger AA, Hahn LW, Dudek SM, Ryckman KK, Ritchie MD. Alternative Cross-Over Strategies and Selection Techniques for Grammatical Evolution Optimized Neural Networks. Genetic and Evolutionary Computation Conference : [Proceedings] / Sponsored by Acm Sigevo. Genetic and Evolutionary Computation Conference. 2006: 947-948. PMID 20634918 DOI: 10.1145/1143997.1144163  0.027
2008 Edwards TL, Bush WS, Turner SD, Dudek SM, Torstenson ES, Schmidt M, Martin E, Ritchie MD. Generating linkage disequilibrium patterns in data simulations using genomeSIMLA Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4973: 24-35. DOI: 10.1007/978-3-540-78757-0_3  0.026
2005 Dudek SM, Birukov KG. Apoptosis in ventilator-induced lung injury: more questions to ASK? Critical Care Medicine. 33: 2118-9. PMID 16148490 DOI: 10.1097/01.CCM.0000178287.15348.EF  0.025
2015 Camp SM, Chiang ET, Sun C, Usatyuk PV, Bittman R, Natarajan V, Garcia JGN, Dudek SM. Pulmonary Endothelial Cell Barrier Enhancement by Novel FTY720 Analogs: Methoxy-FTY720, Fluoro-FTY720, and β-Glucuronide-FTY720 Chemistry and Physics of Lipids. 191: 16-24. DOI: 10.1016/j.chemphyslip.2015.08.004  0.024
1981 Knight JA, Dudek SM, Haymond RE. Early (chemical) diagnosis of bacterial meningitis--cerebrospinal fluid glucose, lactate, and lactate dehydrogenase compared. Clinical Chemistry. 27: 1431-4. PMID 7273404  0.02
2012 Muñoz NM, Desai A, Meliton LN, Meliton AY, Zhou T, Leff AR, Dudek SM. Group V phospholipase A(2) increases pulmonary endothelial permeability through direct hydrolysis of the cell membrane. Pulmonary Circulation. 2: 182-92. PMID 22837859 DOI: 10.4103/2045-8932.97604  0.02
2012 Holzinger ER, Dudek SM, Frase AT, Fridley B, Chalise P, Ritchie MD. Comparison of methods for meta-dimensional data analysis using in silico and biological data sets Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 7246: 134-143. DOI: 10.1007/978-3-642-29066-4_12  0.019
1979 Knight JA, Dudek SM, Haymond RE. Increased cerebrospinal fluid lactate and early diagnosis of bacterial meningitis. Clinical Chemistry. 25: 809-10. PMID 436257  0.01
2013 Belvitch P, Dudek SM. Corticosteroids and acute respiratory distress syndrome: the debate continues. Critical Care Medicine. 41: 1813-4. PMID 23774346 DOI: 10.1097/CCM.0b013e3182963cfb  0.01
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