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Shixin Ye, Ph.D. - Publications

Affiliations: 
2004 University of Pennsylvania, Philadelphia, PA, United States 
Area:
nano-scale materials science and biophysical chemistry
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23 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Lehmann J, Ye S. D Amino Acids Highlight the Catalytic Power of the Ribosome. Cell Chemical Biology. PMID 31680066 DOI: 10.1016/J.Chembiol.2019.10.007  0.313
2017 Tian M, Ye S. Design of Light-Sensitive NMDARs by Genetically Encoded Photo-Cross-Linkers. Methods in Molecular Biology (Clifton, N.J.). 1677: 185-197. PMID 28986874 DOI: 10.1007/978-1-4939-7321-7_10  0.305
2017 Klippenstein V, Hoppmann C, Ye S, Wang L, Paoletti P. Optocontrol of glutamate receptor activity by single side-chain photoisomerization. Elife. 6. PMID 28534738 DOI: 10.7554/Elife.25808  0.414
2016 Tian M, Ye S. Allosteric regulation in NMDA receptors revealed by the genetically encoded photo-cross-linkers. Scientific Reports. 6: 34751. PMID 27713495 DOI: 10.1038/Srep34751  0.39
2014 Zhu S, Riou M, Yao CA, Carvalho S, Rodriguez PC, Bensaude O, Paoletti P, Ye S. Genetically encoding a light switch in an ionotropic glutamate receptor reveals subunit-specific interfaces. Proceedings of the National Academy of Sciences of the United States of America. 111: 6081-6. PMID 24715733 DOI: 10.1073/Pnas.1318808111  0.354
2013 Huber T, Naganathan S, Tian H, Ye S, Sakmar TP. Unnatural amino acid mutagenesis of GPCRs using amber codon suppression and bioorthogonal labeling Methods in Enzymology. 520: 281-305. PMID 23332705 DOI: 10.1016/B978-0-12-391861-1.00013-7  0.328
2013 Naganathan S, Ye S, Sakmar TP, Huber T. Site-specific epitope tagging of G protein-coupled receptors by bioorthogonal modification of a genetically encoded unnatural amino acid Biochemistry. 52: 1028-1036. PMID 23317030 DOI: 10.1021/Bi301292H  0.388
2013 Ye S, Riou M, Carvalho S, Paoletti P. Expanding the genetic code in Xenopus laevis oocytes. Chembiochem : a European Journal of Chemical Biology. 14: 230-5. PMID 23292655 DOI: 10.1002/Cbic.201200515  0.361
2012 Tian H, Naganathan S, Ye S, Sakmar TP, Huber T. Dual-Color Fluorescent Labeling of G Protein-Coupled Receptors Biophysical Journal. 102: 518a. DOI: 10.1016/J.Bpj.2011.11.2831  0.346
2011 Tian H, Naganathan S, Ye S, Sakmar TP, Huber T. Site-Specific Fluorescent Labeling of G Protein-Coupled Receptors Biophysical Journal. 100: 256a. DOI: 10.1016/J.Bpj.2010.12.1617  0.327
2010 Ye S, Zaitseva E, Caltabiano G, Schertler GFX, Sakmar TP, Deupi X, Vogel R. Tracking G-protein-coupled receptor activation using genetically encoded infrared probes Nature. 464: 1386-1389. PMID 20383122 DOI: 10.1038/Nature08948  0.353
2010 Naganathan S, Ye S, Duarte T, Huber T, Sachdev P, Sakmar TP. A Novel Method to Probe Membrane Protein Topology Using Unnatural Amino Acid Mutagenesis and Antibody Epitope Tagging Biophysical Journal. 98: 419a. DOI: 10.1016/J.Bpj.2009.12.2263  0.39
2010 Grunbeck A, Huber T, Ye S, Banerjee S, Sakmar TP. Novel Technology to Study Chemokine Receptor Signaling Complexes Biophysical Journal. 98: 292a. DOI: 10.1016/J.Bpj.2009.12.1591  0.364
2010 Ye S, Kazmi MA, Duarte T, Naganathan S, Sakmar T, Huber T. Site-Specific Fluorescent Labeling of Purified G-Protein-Coupled Receptors Using Genetically-Encoded Unnatural Amino Acids Biophysical Journal. 98: 291a-292a. DOI: 10.1016/J.Bpj.2009.12.1588  0.363
2009 Ye S, Huber T, Vogel R, Sakmar TP. FTIR analysis of GPCR activation using azido probes Nature Chemical Biology. 5: 397-399. PMID 19396177 DOI: 10.1038/Nchembio.167  0.322
2009 Ye S, Huber T, Vogel R, Sakmar TP. Probing Conformational Changes In Rhodopsin With Site-specific Azido Labels Biophysical Journal. 96: 6a. DOI: 10.1016/J.Bpj.2008.12.927  0.368
2009 Ye S, Huber T, Sakmar TP. Unnatural Amino Acid Mutagenesis For Site-specific Incorporation Of Keto And Azido Functionalities Into Functional G Protein-coupled Receptors Biophysical Journal. 96: 632a. DOI: 10.1016/J.Bpj.2008.12.3343  0.355
2008 Ye S, Köhrer C, Huber T, Kazmi M, Sachdev P, Yan EC, Bhagat A, RajBhandary UL, Sakmar TP. Site-specific incorporation of keto amino acids into functional G protein-coupled receptors using unnatural amino acid mutagenesis. The Journal of Biological Chemistry. 283: 1525-33. PMID 17993461 DOI: 10.1074/Jbc.M707355200  0.375
2005 Ye S, Discher BM, Strzalka J, Xu T, Wu SP, Noy D, Kuzmenko I, Gog T, Therien MJ, Dutton PL, Blasie JK. Amphiphilic four-helix bundle peptides designed for light-induced electron transfer across a soft interface. Nano Letters. 5: 1658-67. PMID 16159202 DOI: 10.1021/Nl050542K  0.661
2005 Discher BM, Noy D, Strzalka J, Ye S, Moser CC, Lear JD, Blasie JK, Dutton PL. Design of amphiphilic protein maquettes: controlling assembly, membrane insertion, and cofactor interactions. Biochemistry. 44: 12329-43. PMID 16156646 DOI: 10.1021/Bi050695M  0.662
2004 Ye S, Strzalka JW, Discher BM, Noy D, Zheng S, Dutton PL, Blasie JK. Amphiphilic 4-helix bundles designed for biomolecular materials applications. Langmuir : the Acs Journal of Surfaces and Colloids. 20: 5897-904. PMID 16459607 DOI: 10.1021/La0363884  0.671
2004 Ye S, Strzalka J, Churbanova IY, Zheng S, Johansson JS, Blasie JK. A model membrane protein for binding volatile anesthetics. Biophysical Journal. 87: 4065-74. PMID 15465862 DOI: 10.1529/Biophysj.104.051045  0.669
2003 Ye S, Strzalka J, Chen X, Moser CC, Dutton PL, Blasie JK. Assembly of a vectorially oriented four-helix bundle at the air/water interface via directed electrostatic interactions Langmuir. 19: 1515-1521. DOI: 10.1021/La026258F  0.647
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