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Ahmet M. Denli - Publications

Affiliations: 
Salk Institute for Biological Studies, La Jolla, CA, United States 
Area:
neural stem cells, adult neurogenesis
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18/27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Bedrosian TA, Houtman J, Eguiguren JS, Ghassemzadeh S, Rund N, Novaresi NM, Hu L, Parylak SL, Denli AM, Randolph-Moore L, Namba T, Gage FH, Toda T. Lamin B1 decline underlies age-related loss of adult hippocampal neurogenesis. The Embo Journal. e105819. PMID 33300615 DOI: 10.15252/embj.2020105819  0.393
2020 Kerman BE, Genoud S, Kurt Vatandaslar B, Denli AM, Ghosh SG, Xu X, Yeo GW, Aimone JB, Gage FH. Motoneuron expression profiling identifies an association between an axonal splice variant of HDGF-related protein 3 and peripheral myelination. The Journal of Biological Chemistry. PMID 32647008 DOI: 10.1074/Jbc.Ra120.014329  0.717
2020 Kurian L, Sancho-Martinez I, Nivet E, Aguirre A, Moon K, Pendaries C, Volle-Challier C, Bono F, Herbert JM, Pulecio J, Xia Y, Li M, Montserrat N, Ruiz S, Dubova I, ... ... Denli AM, et al. Author Correction: Conversion of human fibroblasts to angioblast-like progenitor cells. Nature Methods. PMID 32034376 DOI: 10.1038/S41592-020-0745-8  0.517
2019 Marchetto MC, Hrvoj-Mihic B, Kerman BE, Yu DX, Vadodaria KC, Linker SB, Narvaiza I, Santos R, Denli AM, Mendes AP, Oefner R, Cook J, McHenry L, Grasmick JM, Heard K, et al. Species-specific maturation profiles of human, chimpanzee and bonobo neural cells. Elife. 8. PMID 30730291 DOI: 10.7554/Elife.37527  0.721
2018 Kronenberg ZN, Fiddes IT, Gordon D, Murali S, Cantsilieris S, Meyerson OS, Underwood JG, Nelson BJ, Chaisson MJP, Dougherty ML, Munson KM, Hastie AR, Diekhans M, Hormozdiari F, Lorusso N, ... ... Denli AM, et al. High-resolution comparative analysis of great ape genomes. Science (New York, N.Y.). 360. PMID 29880660 DOI: 10.1126/Science.Aar6343  0.482
2018 Marchetto MC, Hrvoj-Mihic B, Kerman BE, Yu DX, Vadodaria KC, Linker SB, Narvaiza I, Santos R, Denli AM, Mendes AP, Oefner R, Cook J, McHenry L, Grasmick JM, Heard K, et al. Author response: Species-specific maturation profiles of human, chimpanzee and bonobo neural cells Elife. DOI: 10.7554/Elife.37527.024  0.755
2017 Linker SB, Marchetto MC, Narvaiza I, Denli AM, Gage FH. Examining non-LTR retrotransposons in the context of the evolving primate brain. Bmc Biology. 15: 68. PMID 28800766 DOI: 10.1186/S12915-017-0409-Z  0.703
2017 Santos R, Vadodaria KC, Jaeger BN, Mei A, Lefcochilos-Fogelquist S, Mendes APD, Erikson G, Shokhirev M, Randolph-Moore L, Fredlender C, Dave S, Oefner R, Fitzpatrick C, Pena M, Barron JJ, ... ... Denli AM, et al. Differentiation of Inflammation-Responsive Astrocytes from Glial Progenitors Generated from Human Induced Pluripotent Stem Cells. Stem Cell Reports. 8: 1757-1769. PMID 28591655 DOI: 10.1016/J.Stemcr.2017.05.011  0.76
2016 Han J, Kim HJ, Schafer ST, Paquola A, Clemenson GD, Toda T, Oh J, Pankonin AR, Lee BS, Johnston ST, Sarkar A, Denli AM, Gage FH. Functional Implications of miR-19 in the Migration of Newborn Neurons in the Adult Brain. Neuron. 91: 79-89. PMID 27387650 DOI: 10.1016/J.Neuron.2016.05.034  0.745
2015 Kim HJ, Denli AM, Wright R, Baul TD, Clemenson GD, Morcos AS, Zhao C, Schafer ST, Gage FH, Kagalwala MN. REST Regulates Non-Cell-Autonomous Neuronal Differentiation and Maturation of Neural Progenitor Cells via Secretogranin II. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 35: 14872-84. PMID 26538656 DOI: 10.1523/Jneurosci.4286-14.2015  0.734
2015 Denli AM, Narvaiza I, Kerman BE, Pena M, Benner C, Marchetto MC, Diedrich JK, Aslanian A, Ma J, Moresco JJ, Moore L, Hunter T, Saghatelian A, Gage FH. Primate-Specific ORF0 Contributes to Retrotransposon-Mediated Diversity. Cell. 163: 583-93. PMID 26496605 DOI: 10.1016/J.Cell.2015.09.025  0.744
2013 Marchetto MC, Narvaiza I, Denli AM, Benner C, Lazzarini TA, Nathanson JL, Paquola AC, Desai KN, Herai RH, Weitzman MD, Yeo GW, Muotri AR, Gage FH. Differential L1 regulation in pluripotent stem cells of humans and apes. Nature. 503: 525-9. PMID 24153179 DOI: 10.1038/Nature12686  0.769
2013 Kurian L, Sancho-Martinez I, Nivet E, Aguirre A, Moon K, Pendaries C, Volle-Challier C, Bono F, Herbert JM, Pulecio J, Xia Y, Li M, Montserrat N, Ruiz S, Dubova I, ... ... Denli AM, et al. Conversion of human fibroblasts to angioblast-like progenitor cells. Nature Methods. 10: 77-83. PMID 23202434 DOI: 10.1038/Nmeth.2255  0.581
2012 Han J, Denli AM, Gage FH. The enemy within: intronic miR-26b represses its host gene, ctdsp2, to regulate neurogenesis. Genes & Development. 26: 6-10. PMID 22215805 DOI: 10.1101/Gad.184416.111  0.575
2012 Shimozaki K, Zhang CL, Suh H, Denli AM, Evans RM, Gage FH. SRY-box-containing gene 2 regulation of nuclear receptor tailless (Tlx) transcription in adult neural stem cells. The Journal of Biological Chemistry. 287: 5969-78. PMID 22194602 DOI: 10.1074/Jbc.M111.290403  0.681
2011 Shimozaki K, Zhang C, Suh H, Denli A, Evans RM, Gage FH. Functional roles of Sox2 for the molecular regulation of TLX/NR2E1 in adult neural stem/progenitor cells Neuroscience Research. 71: e124. DOI: 10.1016/J.Neures.2011.07.531  0.708
2009 Denli AM, Cao X, Gage FH. miR-9 and TLX: chasing tails in neural stem cells. Nature Structural & Molecular Biology. 16: 346-7. PMID 19343066 DOI: 10.1038/Nsmb0409-346  0.571
2007 Aigner S, Denli AM, Gage FH. A novel model for an older remodeler: the BAF swap in neurogenesis. Neuron. 55: 171-3. PMID 17640518 DOI: 10.1016/J.Neuron.2007.07.004  0.543
Low-probability matches (unlikely to be authored by this person)
2003 Denli AM, Hannon GJ. RNAi: an ever-growing puzzle. Trends in Biochemical Sciences. 28: 196-201. PMID 12713903 DOI: 10.1016/S0968-0004(03)00058-6  0.291
2005 Schramke V, Sheedy DM, Denli AM, Bonila C, Ekwall K, Hannon GJ, Allshire RC. RNA-interference-directed chromatin modification coupled to RNA polymerase II transcription. Nature. 435: 1275-9. PMID 15965464 DOI: 10.1038/Nature03652  0.274
2008 Zhou R, Hotta I, Denli AM, Hong P, Perrimon N, Hannon GJ. Comparative analysis of argonaute-dependent small RNA pathways in Drosophila. Molecular Cell. 32: 592-9. PMID 19026789 DOI: 10.1016/J.Molcel.2008.10.018  0.27
2005 Qi Y, Denli AM, Hannon GJ. Biochemical specialization within Arabidopsis RNA silencing pathways. Molecular Cell. 19: 421-8. PMID 16061187 DOI: 10.1016/J.Molcel.2005.06.014  0.269
2005 Förstemann K, Tomari Y, Du T, Vagin VV, Denli AM, Bratu DP, Klattenhoff C, Theurkauf WE, Zamore PD. Normal microRNA maturation and germ-line stem cell maintenance requires Loquacious, a double-stranded RNA-binding domain protein. Plos Biology. 3: e236. PMID 15918770 DOI: 10.1371/Journal.Pbio.0030236  0.264
2003 Caudy AA, Ketting RF, Hammond SM, Denli AM, Bathoorn AM, Tops BB, Silva JM, Myers MM, Hannon GJ, Plasterk RH. A micrococcal nuclease homologue in RNAi effector complexes. Nature. 425: 411-4. PMID 14508492 DOI: 10.1038/Nature01956  0.259
2004 Denli AM, Tops BB, Plasterk RH, Ketting RF, Hannon GJ. Processing of primary microRNAs by the Microprocessor complex. Nature. 432: 231-5. PMID 15531879 DOI: 10.1038/Nature03049  0.255
2005 Schramke V, Sheedy DM, Denli AM, Bonila C, Ekwall K, Hannon GJ, Allshire RC. Retraction: RNA-interference-directed chromatin modification coupled to RNA polymerase II transcription. Nature. 437: 1057. PMID 16222304 DOI: 10.1038/Nature04181  0.253
2001 Bernstein E, Denli AM, Hannon GJ. The rest is silence. Rna (New York, N.Y.). 7: 1509-21. PMID 11720281  0.174
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