☰

Nathan C. Shaner, Ph.D. - Publications

Affiliations: 
2006 Scintillon Institute for Biomedial & Bioenergy Research 
Tree Info Similar researchers PubMed Report error

30/54 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Drobizhev M, Molina RS, Callis PR, Scott JN, Lambert GG, Salih A, Shaner NC, Hughes TE. Local Electric Field Controls Fluorescence Quantum Yield of Red and Far-Red Fluorescent Proteins. Frontiers in Molecular Biosciences. 8: 633217. PMID 33763453 DOI: 10.3389/fmolb.2021.633217  0.367
2020 Lambert GG, Depernet H, Gotthard G, Schultz DT, Navizet I, Lambert T, Adams SR, Torreblanca-Zanca A, Chu M, Bindels DS, Levesque V, Nero Moffatt J, Salih A, Royant A, Shaner NC. Aequorea's secrets revealed: New fluorescent proteins with unique properties for bioimaging and biosensing. Plos Biology. 18: e3000936. PMID 33137097 DOI: 10.1371/journal.pbio.3000936  0.474
2020 Celinskis D, Friedman N, Koksharov M, Murphy J, Gomez-Ramirez M, Borton D, Shaner N, Hochgeschwender U, Lipscombe D, Moore C. Miniaturized Devices for Bioluminescence Imaging in Freely Behaving Animals. Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual International Conference. 2020: 4385-4389. PMID 33018967 DOI: 10.1109/EMBC44109.2020.9175375  0.366
2018 Tewson P, Martinka S, Shaner N, Berlot C, Quinn AM, Hughes T. Assay for Detecting Gαi-Mediated Decreases in cAMP in Living Cells. Slas Discovery : Advancing Life Sciences R & D. 2472555218786238. PMID 29991302 DOI: 10.1177/2472555218786238  0.324
2017 Mastop M, Bindels DS, Shaner NC, Postma M, Gadella TWJ, Goedhart J. Characterization of a spectrally diverse set of fluorescent proteins as FRET acceptors for mTurquoise2. Scientific Reports. 7: 11999. PMID 28931898 DOI: 10.1038/S41598-017-12212-X  0.544
2017 Molina RS, Tran TM, Campbell RE, Lambert GG, Salih A, Shaner NC, Hughes TE, Drobizhev M. Blue-Shifted Green Fluorescent Protein Homologs Are Brighter Than Enhanced Green Fluorescent Protein under Two-Photon Excitation. The Journal of Physical Chemistry Letters. PMID 28530831 DOI: 10.1021/Acs.Jpclett.7B00960  0.645
2017 Shen Y, Chen Y, Wu J, Shaner NC, Campbell RE. Engineering of mCherry variants with long Stokes shift, red-shifted fluorescence, and low cytotoxicity. Plos One. 12: e0171257. PMID 28241009 DOI: 10.1371/Journal.Pone.0171257  0.662
2017 Molina RS, Campbell RE, Shaner NC, Hughes TE, Drobizhev M. New GFP Variants with Enhanced Two-Photon Brightness Biophysical Journal. 112: 2-4. DOI: 10.1016/J.Bpj.2016.11.1540  0.507
2016 Clavel D, Gotthard G, von Stetten D, De Sanctis D, Pasquier H, Lambert GG, Shaner NC, Royant A. Structural analysis of the bright monomeric yellow-green fluorescent protein mNeonGreen obtained by directed evolution. Acta Crystallographica. Section D, Structural Biology. 72: 1298-1307. PMID 27917830 DOI: 10.1107/S2059798316018623  0.541
2016 Rodriguez EA, Shaner NC, Lin MZ, Campbell RE. The Author File: Roger Y Tsien (1952-2016) Nature Methods. 13: 893-893. DOI: 10.1038/Nmeth.4044  0.655
2015 Tewson PH, Martinka S, Shaner NC, Hughes TE, Quinn AM. New DAG and cAMP Sensors Optimized for Live-Cell Assays in Automated Laboratories. Journal of Biomolecular Screening. PMID 26657040 DOI: 10.1177/1087057115618608  0.415
2015 Fujita K, Nagai T, Shaner N, Egner A. Special Section Guest Editorial:Protein Photonics for Imaging, Sensing, and Manipulation: Honoring Prof. Osamu Shimomura, a Pioneer of Photonics for Biomedical Research. Journal of Biomedical Optics. 20: 101201. PMID 26527157 DOI: 10.1117/1.Jbo.20.10.101201  0.365
2014 Shaner NC. Fluorescent proteins for quantitative microscopy: important properties and practical evaluation. Methods in Cell Biology. 123: 95-111. PMID 24974024 DOI: 10.1016/B978-0-12-420138-5.00006-9  0.462
2013 Shaner NC, Lambert GG, Chammas A, Ni Y, Cranfill PJ, Baird MA, Sell BR, Allen JR, Day RN, Israelsson M, Davidson MW, Wang J. A bright monomeric green fluorescent protein derived from Branchiostoma lanceolatum. Nature Methods. 10: 407-9. PMID 23524392 DOI: 10.1038/Nmeth.2413  0.588
2013 Powers ML, McDermott AG, Shaner NC, Haddock SH. Expression and characterization of the calcium-activated photoprotein from the ctenophore Bathocyroe fosteri: insights into light-sensitive photoproteins. Biochemical and Biophysical Research Communications. 431: 360-6. PMID 23262181 DOI: 10.1016/J.Bbrc.2012.12.026  0.347
2013 Shaner NC. The mFruit collection of monomeric fluorescent proteins. Clinical Chemistry. 59: 440-1. PMID 23213078 DOI: 10.1373/Clinchem.2012.194837  0.593
2011 Li H, Foss SM, Dobryy YL, Park CK, Hires SA, Shaner NC, Tsien RY, Osborne LC, Voglmaier SM. Concurrent imaging of synaptic vesicle recycling and calcium dynamics. Frontiers in Molecular Neuroscience. 4: 34. PMID 22065946 DOI: 10.3389/Fnmol.2011.00034  0.695
2010 Hoi H, Shaner NC, Davidson MW, Cairo CW, Wang J, Campbell RE. A monomeric photoconvertible fluorescent protein for imaging of dynamic protein localization. Journal of Molecular Biology. 401: 776-91. PMID 20603133 DOI: 10.1016/J.Jmb.2010.06.056  0.691
2010 Ouyang M, Huang H, Shaner NC, Remacle AG, Shiryaev SA, Strongin AY, Tsien RY, Wang Y. Simultaneous visualization of protumorigenic Src and MT1-MMP activities with fluorescence resonance energy transfer. Cancer Research. 70: 2204-12. PMID 20197470 DOI: 10.1158/0008-5472.Can-09-3698  0.493
2009 Lin MZ, McKeown MR, Ng HL, Aguilera TA, Shaner NC, Campbell RE, Adams SR, Gross LA, Ma W, Alber T, Tsien RY. Autofluorescent proteins with excitation in the optical window for intravital imaging in mammals. Chemistry & Biology. 16: 1169-79. PMID 19942140 DOI: 10.1016/J.Chembiol.2009.10.009  0.755
2009 Shaner NC, Lin MZ, Mckeown MR, Steinbach PA, Hazelwood KL, Davidson MW, Tsien RY. Evaluating and improving the photostability of fluorescent proteins Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7191. DOI: 10.1117/12.814684  0.703
2008 Shaner NC, Lin MZ, McKeown MR, Steinbach PA, Hazelwood KL, Davidson MW, Tsien RY. Improving the photostability of bright monomeric orange and red fluorescent proteins. Nature Methods. 5: 545-51. PMID 18454154 DOI: 10.1038/Nmeth.1209  0.725
2007 Shaner NC, Patterson GH, Davidson MW. Advances in fluorescent protein technology. Journal of Cell Science. 120: 4247-60. PMID 18057027 DOI: 10.1242/Jcs.005801  0.543
2007 Ai HW, Shaner NC, Cheng Z, Tsien RY, Campbell RE. Exploration of new chromophore structures leads to the identification of improved blue fluorescent proteins. Biochemistry. 46: 5904-10. PMID 17444659 DOI: 10.1021/Bi700199G  0.736
2006 Shu X, Shaner NC, Yarbrough CA, Tsien RY, Remington SJ. Novel chromophores and buried charges control color in mFruits. Biochemistry. 45: 9639-47. PMID 16893165 DOI: 10.1021/Bi060773L  0.663
2005 Shaner NC, Steinbach PA, Tsien RY. A guide to choosing fluorescent proteins. Nature Methods. 2: 905-9. PMID 16299475 DOI: 10.1038/Nmeth819  0.62
2005 Wang J, Shaner N, Mittal B, Zhou Q, Chen J, Sanger JM, Sanger JW. Dynamics of Z-band based proteins in developing skeletal muscle cells. Cell Motility and the Cytoskeleton. 61: 34-48. PMID 15810059 DOI: 10.1002/Cm.20063  0.338
2005 Shaner NC, Sanger JW, Sanger JM. Actin and alpha-actinin dynamics in the adhesion and motility of EPEC and EHEC on host cells. Cell Motility and the Cytoskeleton. 60: 104-20. PMID 15627283 DOI: 10.1002/Cm.20047  0.397
2004 Shaner NC, Campbell RE, Steinbach PA, Giepmans BN, Palmer AE, Tsien RY. Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein. Nature Biotechnology. 22: 1567-72. PMID 15558047 DOI: 10.1038/Nbt1037  0.761
2001 Ayoob JC, Shaner NC, Sanger JW, Sanger JM. Expression of green or red fluorescent protein (GFP or DsRed) linked proteins in nonmuscle and muscle cells. Molecular Biotechnology. 17: 65-71. PMID 11280932 DOI: 10.1385/Mb:17:1:65  0.526
Low-probability matches (unlikely to be authored by this person)
2018 Hong SR, Wang CL, Huang YS, Chang YC, Chang YC, Pusapati GV, Lin CY, Hsu N, Cheng HC, Chiang YC, Huang WE, Shaner NC, Rohatgi R, Inoue T, Lin YC. Spatiotemporal manipulation of ciliary glutamylation reveals its roles in intraciliary trafficking and Hedgehog signaling. Nature Communications. 9: 1732. PMID 29712905 DOI: 10.1038/S41467-018-03952-Z  0.282
2015 Francis WR, Shaner NC, Christianson LM, Powers ML, Haddock SHD. Percent Identity Matrix of all 2-oxoglutarate Fe-Group 2 proteins. Plos One. DOI: 10.1371/Journal.Pone.0128742.T007  0.272
2023 Lambert GG, Crespo EL, Murphy J, Boassa D, Luong S, Hu J, Sprecher B, Tree MO, Orcutt R, Heydari D, Bell AB, Torreblanca Zanca A, Hakimi A, Lipscombe D, Moore CI, ... ... Shaner NC, et al. CaBLAM! A high-contrast bioluminescent Ca indicator derived from an engineered luciferase. Biorxiv : the Preprint Server For Biology. PMID 37425712 DOI: 10.1101/2023.06.25.546478  0.263
2023 Petersen ED, Lapan AP, Castellanos Franco EA, Fillion AJ, Crespo EL, Lambert GG, Grady CJ, Zanca AT, Orcutt R, Hochgeschwender U, Shaner NC, Gilad AA. Bioluminescent Genetically Encoded Glutamate Indicators for Molecular Imaging of Neuronal Activity. Acs Synthetic Biology. PMID 37450884 DOI: 10.1021/acssynbio.2c00687  0.258
2015 Francis WR, Shaner NC, Christianson LM, Powers ML, Haddock SH. Occurrence of Isopenicillin-N-Synthase Homologs in Bioluminescent Ctenophores and Implications for Coelenterazine Biosynthesis. Plos One. 10: e0128742. PMID 26125183 DOI: 10.1371/Journal.Pone.0128742  0.256
2013 Powers ML, McDermott AG, Shaner NC, Haddock SHD. Erratum to “Expression and characterization of the calcium-activated photoprotein from the ctenophore Bathocyroe fosteri: Insights into light-sensitive photoproteins” [Biochem. Biophys. Res. Commun. 431 (2013) 360–366] Biochemical and Biophysical Research Communications. 435: 751. DOI: 10.1016/J.Bbrc.2008.07.166  0.251
2011 Siebert S, Robinson MD, Tintori SC, Goetz F, Helm RR, Smith SA, Shaner N, Haddock SH, Dunn CW. Differential gene expression in the siphonophore Nanomia bijuga (Cnidaria) assessed with multiple next-generation sequencing workflows. Plos One. 6: e22953. PMID 21829563 DOI: 10.1371/Journal.Pone.0022953  0.24
2011 Ewen-Campen B, Shaner N, Panfilio KA, Suzuki Y, Roth S, Extavour CG. The maternal and early embryonic transcriptome of the milkweed bug Oncopeltus fasciatus. Bmc Genomics. 12: 61. PMID 21266083 DOI: 10.1186/1471-2164-12-61  0.221
2002 Sanger JW, Chowrashi P, Shaner NC, Spalthoff S, Wang J, Freeman NL, Sanger JM. Myofibrillogenesis in skeletal muscle cells. Clinical Orthopaedics and Related Research. S153-62. PMID 12394464 DOI: 10.1097/00003086-200210001-00018  0.213
2013 Francis WR, Christianson LM, Kiko R, Powers ML, Shaner NC, D Haddock SH. A comparison across non-model animals suggests an optimal sequencing depth for de novo transcriptome assembly. Bmc Genomics. 14: 167. PMID 23496952 DOI: 10.1186/1471-2164-14-167  0.205
2023 Björefeldt A, Murphy J, Crespo EL, Prakash M, Friedman N, Brown TM, Lipscombe D, Moore CI, Hochgeschwender U, Shaner NC. A FRET-based excitatory luminopsin with improved efficacy of bioluminescence-driven channelrhodopsin activation. Biorxiv : the Preprint Server For Biology. PMID 37425735 DOI: 10.1101/2023.06.26.545546  0.146
2023 Crespo EL, Pal A, Prakash M, Silvagnoli AD, Zaidi Z, Gomez-Ramirez M, Tree MO, Shaner NC, Lipscombe D, Moore C, Hochgeschwender U. A Bioluminescent Activity Dependent (BLADe) Platform for Converting Neuronal Activity to Photoreceptor Activation. Biorxiv : the Preprint Server For Biology. PMID 37425742 DOI: 10.1101/2023.06.25.546469  0.13
2022 Prakash M, Murphy J, St Laurent R, Friedman N, Crespo EL, Bjorefeldt A, Pal A, Bhagat Y, Kauer JA, Shaner NC, Lipscombe D, Moore CI, Hochgeschwender U. Selective control of synaptically-connected circuit elements by all-optical synapses. Communications Biology. 5: 33. PMID 35017641 DOI: 10.1038/s42003-021-02981-7  0.115
2021 Parashar S, Chidambaram R, Chen S, Liem CR, Griffis E, Lambert GG, Shaner NC, Wortham M, Hay JC, Ferro-Novick S. Endoplasmic reticulum tubules limit the size of misfolded protein condensates. Elife. 10. PMID 34467852 DOI: 10.7554/eLife.71642  0.11
2021 Crespo EL, Prakash M, Bjorefeldt A, Medendorp WE, Shaner NC, Lipscombe D, Moore CI, Hochgeschwender U. Bioluminescent optogenetic (BL-OG) activation of neurons during mouse postnatal brain development. Star Protocols. 2: 100667. PMID 34286295 DOI: 10.1016/j.xpro.2021.100667  0.102
2024 Slaviero AN, Gorantla N, Simkins J, Crespo EL, Ikefuama EC, Tree MO, Prakash M, Björefeldt A, Barnett LM, Lambert GG, Lipscombe D, Moore CI, Shaner NC, Hochgeschwender U. Engineering luminopsins with improved coupling efficiencies. Neurophotonics. 11: 024208. PMID 38559366 DOI: 10.1117/1.NPh.11.2.024208  0.08
2023 Slaviero A, Gorantla N, Simkins J, Crespo EL, Ikefuama EC, Tree MO, Prakash M, Björefeldt A, Barnett LM, Lambert GG, Lipscombe D, Moore CI, Shaner NC, Hochgeschwender U. Engineering luminopsins with improved coupling efficiencies. Biorxiv : the Preprint Server For Biology. PMID 38045286 DOI: 10.1101/2023.11.22.568342  0.08
2024 Björefeldt A, Murphy J, Crespo EL, Lambert GG, Prakash M, Ikefuama EC, Friedman N, Brown TM, Lipscombe D, Moore CI, Hochgeschwender U, Shaner NC. Efficient opto- and chemogenetic control in a single molecule driven by FRET-modified bioluminescence. Neurophotonics. 11: 021005. PMID 38450294 DOI: 10.1117/1.NPh.11.2.021005  0.071
2019 de Heuvel E, Singh AK, Boronat P, Kooistra AJ, van der Meer T, Sadek P, Blaazer AR, Shaner NC, Bindels DS, Caljon G, Maes L, Sterk GJ, Siderius M, Oberholzer M, de Esch IJP, et al. Alkynamide phthalazinones as a new class of TbrPDEB1 inhibitors (Part 2). Bioorganic & Medicinal Chemistry. PMID 31378593 DOI: 10.1016/j.bmc.2019.06.026  0.069
2023 Celinskis D, Black CJ, Murphy J, Barrios-Anderson A, Friedman N, Shaner NC, Saab C, Gomez-Ramirez M, Lipscombe D, Borton DA, Moore CI. Towards a Brighter Constellation: Multi-Organ Neuroimaging of Neural and Vascular Dynamics in the Spinal Cord and Brain. Biorxiv : the Preprint Server For Biology. PMID 38234789 DOI: 10.1101/2023.12.25.573323  0.034
2000 Warner RE, McKinnon MH, Shaner NC, Becchetti FD, Nadasen A, Roberts DA, Brown JA, Galonsky A, Kolata JJ, Ronningen RM, Steiner M, Subotic K. Total reaction and neutron-removal cross sections of (30-60)A MeV He and Li isotopes on Pb Physical Review C - Nuclear Physics. 62: 246081-246089.  0.029
2000 Warner RE, McKinnon MH, Shaner NC, Becchetti FD, Nadasen A, Roberts DA, Brown JA, Galonsky A, Kolata JJ, Ronningen RM, Steiner M, Subotic K. Total reaction and neutron-removal cross sections of(30–60)AMeVHe and Li isotopes on Pb Physical Review C. 62. DOI: 10.1103/Physrevc.62.024608  0.026
2001 Warner RE, McKinnon MH, Needleman JS, Shaner NC, Becchetti FD, Roberts DA, Galonsky A, Ronningen RM, Steiner M, Brown JA, Kolata JJ, Nadasen A, Subotic K. Total reaction and neutron-removal cross sections of (30-60)A MeV Be isotopes on Si and Pb Physical Review C - Nuclear Physics. 64: 446111-446119.  0.02
2001 Warner RE, McKinnon MH, Needleman JS, Shaner NC, Becchetti FD, Roberts DA, Galonsky A, Ronningen RM, Steiner M, Brown JA, Kolata JJ, Nadasen A, Subotic K. Total reaction and neutron-removal cross sections of(30–60)A MeVBe isotopes on Si and Pb Physical Review C. 64. DOI: 10.1103/Physrevc.64.044611  0.01
Hide low-probability matches.