| Year |
Citation |
Score |
| 2019 |
Cardim Falcao R, Coombs D. Diffusion analysis of single particle trajectories in a Bayesian nonparametrics framework. Physical Biology. PMID 31860874 DOI: 10.1088/1478-3975/Ab64B3 |
0.313 |
|
| 2019 |
Bolger-Munro M, Choi K, Scurll JM, Abraham L, Chappell RS, Sheen D, Dang-Lawson M, Wu X, Priatel JJ, Coombs D, Hammer JA, Gold MR. Arp2/3 complex-driven spatial patterning of the BCR enhances immune synapse formation, BCR signaling and cell activation. Elife. 8. PMID 31157616 DOI: 10.7554/Elife.44574 |
0.378 |
|
| 2018 |
Azoz SA, Coombs D. Stochastic Dynamics of the Latently Infected Cell Reservoir During HIV Infection. Bulletin of Mathematical Biology. PMID 30298198 DOI: 10.1007/S11538-018-0520-5 |
0.312 |
|
| 2017 |
Abraham L, Lu HY, Falcão RC, Scurll J, Jou T, Irwin B, Tafteh R, Gold MR, Coombs D. Limitations of Qdot labelling compared to directly-conjugated probes for single particle tracking of B cell receptor mobility. Scientific Reports. 7: 11379. PMID 28900238 DOI: 10.1038/S41598-017-11563-9 |
0.355 |
|
| 2016 |
López-Ceballos P, Herrera-Reyes AD, Coombs D, Tanentzapf G. In vivo regulation of integrin turnover by outside-in activation. Journal of Cell Science. PMID 27311483 DOI: 10.1242/Dev.143081 |
0.311 |
|
| 2015 |
Hákonardóttir GK, López-Ceballos P, Herrera-Reyes AD, Das R, Coombs D, Tanentzapf G. In Vivo Quantitative Analysis of Talin turnover in response to force. Molecular Biology of the Cell. PMID 26446844 DOI: 10.1091/Mbc.E15-05-0304 |
0.311 |
|
| 2015 |
Woodsworth DJ, Dunsing V, Coombs D. Design Parameters for Granzyme-Mediated Cytotoxic Lymphocyte Target-Cell Killing and Specificity. Biophysical Journal. 109: 477-88. PMID 26244730 DOI: 10.1016/J.Bpj.2015.06.045 |
0.353 |
|
| 2015 |
Freeman SA, Jaumouillé V, Choi K, Hsu BE, Wong HS, Abraham L, Graves ML, Coombs D, Roskelley CD, Das R, Grinstein S, Gold MR. Toll-like receptor ligands sensitize B-cell receptor signalling by reducing actin-dependent spatial confinement of the receptor. Nature Communications. 6: 6168. PMID 25644899 DOI: 10.1038/Ncomms7168 |
0.374 |
|
| 2015 |
Delgado MI, Ward MJ, Coombs D. Conditional mean first passage times to small traps in a 3-D domain with a sticky boundary: Applications to T cell searching behavior in lymph nodes Multiscale Modeling and Simulation. 13: 1224-1258. DOI: 10.1137/140978314 |
0.32 |
|
| 2012 |
Allard JF, Dushek O, Coombs D, van der Merwe PA. Mechanical modulation of receptor-ligand interactions at cell-cell interfaces. Biophysical Journal. 102: 1265-73. PMID 22455909 DOI: 10.1016/J.Bpj.2012.02.006 |
0.664 |
|
| 2011 |
Dushek O, Aleksic M, Wheeler RJ, Zhang H, Cordoba SP, Peng YC, Chen JL, Cerundolo V, Dong T, Coombs D, van der Merwe PA. Antigen potency and maximal efficacy reveal a mechanism of efficient T cell activation. Science Signaling. 4: ra39. PMID 21653229 DOI: 10.1126/Scisignal.2001430 |
0.693 |
|
| 2011 |
Gutenkunst RN, Coombs D, Starr T, Dustin ML, Goldstein B. A biophysical model of cell adhesion mediated by immunoadhesin drugs and antibodies. Plos One. 6: e19701. PMID 21629715 DOI: 10.1371/Journal.Pone.0019701 |
0.419 |
|
| 2011 |
Conway JM, Coombs D. A stochastic model of latently infected cell reactivation and viral blip generation in treated HIV patients. Plos Computational Biology. 7: e1002033. PMID 21552334 DOI: 10.1371/Journal.Pcbi.1002033 |
0.305 |
|
| 2010 |
Valitutti S, Coombs D, Dupré L. The space and time frames of T cell activation at the immunological synapse. Febs Letters. 584: 4851-7. PMID 20940018 DOI: 10.1016/J.Febslet.2010.10.010 |
0.434 |
|
| 2010 |
Cairo CW, Das R, Albohy A, Baca QJ, Pradhan D, Morrow JS, Coombs D, Golan DE. Dynamic regulation of CD45 lateral mobility by the spectrin-ankyrin cytoskeleton of T cells. The Journal of Biological Chemistry. 285: 11392-401. PMID 20164196 DOI: 10.1074/Jbc.M109.075648 |
0.364 |
|
| 2010 |
Aleksic M, Dushek O, Zhang H, Shenderov E, Chen JL, Cerundolo V, Coombs D, van der Merwe PA. Dependence of T cell antigen recognition on T cell receptor-peptide MHC confinement time. Immunity. 32: 163-74. PMID 20137987 DOI: 10.1016/J.Immuni.2009.11.013 |
0.684 |
|
| 2009 |
Dushek O, Das R, Coombs D. A role for rebinding in rapid and reliable T cell responses to antigen. Plos Computational Biology. 5: e1000578. PMID 19956745 DOI: 10.1371/Journal.Pcbi.1000578 |
0.695 |
|
| 2009 |
Das R, Cairo CW, Coombs D. A hidden Markov model for single particle tracks quantifies dynamic interactions between LFA-1 and the actin cytoskeleton. Plos Computational Biology. 5: e1000556. PMID 19893741 DOI: 10.1371/Journal.Pcbi.1000556 |
0.343 |
|
| 2009 |
Coombs D, Straube R, Ward M. Diffusion on a Sphere with Localized Traps: Mean First Passage Time, Eigenvalue Asymptotics, and Fekete Points Siam Journal On Applied Mathematics. 70: 302-332. DOI: 10.1137/080733280 |
0.315 |
|
| 2008 |
Dushek O, Mueller S, Soubies S, Depoil D, Caramalho I, Coombs D, Valitutti S. Effects of intracellular calcium and actin cytoskeleton on TCR mobility measured by fluorescence recovery. Plos One. 3: e3913. PMID 19079546 DOI: 10.1371/Journal.Pone.0003913 |
0.667 |
|
| 2008 |
Goldstein B, Coombs D, Faeder JR, Hlavacek WS. Kinetic proofreading model. Advances in Experimental Medicine and Biology. 640: 82-94. PMID 19065786 DOI: 10.1007/978-0-387-09789-3_8 |
0.392 |
|
| 2008 |
Dushek O, Das R, Coombs D. Analysis of membrane-localized binding kinetics with FRAP. European Biophysics Journal : Ebj. 37: 627-38. PMID 18299825 DOI: 10.1007/S00249-008-0286-Z |
0.633 |
|
| 2008 |
Dushek O, Coombs D. Analysis of serial engagement and peptide-MHC transport in T cell receptor microclusters. Biophysical Journal. 94: 3447-60. PMID 18227132 DOI: 10.1529/Biophysj.107.116897 |
0.671 |
|
| 2008 |
Dushek O, Coombs D. Improving parameter estimation for cell surface FRAP data. Journal of Biochemical and Biophysical Methods. 70: 1224-31. PMID 17707082 DOI: 10.1016/J.Jbbm.2007.07.002 |
0.637 |
|
| 2007 |
Dustin ML, Starr T, Coombs D, Majeau GR, Meier W, Hochman PS, Douglass A, Vale R, Goldstein B, Whitty A. Quantification and modeling of tripartite CD2-, CD58FC chimera (alefacept)-, and CD16-mediated cell adhesion. The Journal of Biological Chemistry. 282: 34748-57. PMID 17911103 DOI: 10.1074/Jbc.M705616200 |
0.346 |
|
| 2006 |
Utzny C, Coombs D, Müller S, Valitutti S. Analysis of peptide/MHC-induced TCR downregulation: deciphering the triggering kinetics. Cell Biochemistry and Biophysics. 46: 101-11. PMID 17012752 DOI: 10.1385/Cbb:46:2:101 |
0.44 |
|
| 2006 |
He X, Coombs D, Myszka DG, Goldstein B. A theoretical and experimental study of competition between solution and surface receptors for ligand in a Biacore flow cell. Bulletin of Mathematical Biology. 68: 1125-50. PMID 16804651 DOI: 10.1007/S11538-006-9093-9 |
0.35 |
|
| 2005 |
González PA, Carreño LJ, Coombs D, Mora JE, Palmieri E, Goldstein B, Nathenson SG, Kalergis AM. T cell receptor binding kinetics required for T cell activation depend on the density of cognate ligand on the antigen-presenting cell. Proceedings of the National Academy of Sciences of the United States of America. 102: 4824-9. PMID 15772168 DOI: 10.1073/Pnas.0500922102 |
0.463 |
|
| 2005 |
Coombs D, Goldstein B. T cell activation: Kinetic proofreading, serial engagement and cell adhesion Journal of Computational and Applied Mathematics. 184: 121-139. DOI: 10.1016/J.Cam.2004.07.035 |
0.432 |
|
| 2004 |
Nelson PW, Gilchrist MA, Coombs D, Hyman JM, Perelson AS. An age-structured model of hiv infection that allows for variations in the production rate of viral particles and the death rate of productively infected cells. Mathematical Biosciences and Engineering : Mbe. 1: 267-88. PMID 20369971 DOI: 10.3934/Mbe.2004.1.267 |
0.329 |
|
| 2004 |
Coombs D, Goldstein B. Effects of the geometry of the immunological synapse on the delivery of effector molecules. Biophysical Journal. 87: 2215-20. PMID 15454424 DOI: 10.1529/Biophysj.104.045674 |
0.412 |
|
| 2004 |
Gilchrist MA, Coombs D, Perelson AS. Optimizing within-host viral fitness: infected cell lifespan and virion production rate. Journal of Theoretical Biology. 229: 281-8. PMID 15207481 DOI: 10.1016/J.Jtbi.2004.04.015 |
0.306 |
|
| 2004 |
Coombs D, Dembo M, Wofsy C, Goldstein B. Equilibrium thermodynamics of cell-cell adhesion mediated by multiple ligand-receptor pairs. Biophysical Journal. 86: 1408-23. PMID 14990470 DOI: 10.1016/S0006-3495(04)74211-3 |
0.47 |
|
| 2002 |
Coombs D, Kalergis AM, Nathenson SG, Wofsy C, Goldstein B. Activated TCRs remain marked for internalization after dissociation from pMHC. Nature Immunology. 3: 926-31. PMID 12244312 DOI: 10.1038/Ni838 |
0.456 |
|
| 2002 |
Coombs D, Huber G, Kessler JO, Goldstein RE. Periodic chirality transformations propagating on bacterial flagella. Physical Review Letters. 89: 118102. PMID 12225172 DOI: 10.1103/Physrevlett.89.118102 |
0.463 |
|
| 2001 |
Wofsy C, Coombs D, Goldstein B. Calculations show substantial serial engagement of T cell receptors Biophysical Journal. 80: 606-612. PMID 11159429 DOI: 10.1016/S0006-3495(01)76041-9 |
0.472 |
|
| 1999 |
Goldstein B, Coombs D, He X, Pineda AR, Wofsy C. The influence of transport on the kinetics of binding to surface receptors: application to cells and BIAcore. Journal of Molecular Recognition : Jmr. 12: 293-9. PMID 10556877 DOI: 10.1002/(Sici)1099-1352(199909/10)12:5<293::Aid-Jmr472>3.0.Co;2-M |
0.375 |
|
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