Uygar Sumbul, Ph.D. - Related publications

2009 Stanford University, Palo Alto, CA 
Electrical Engineering
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15 most relevant papers in past 60 days:
Year Citation  Score
2021 Driscoll MK, Zaritsky A. Data science in cell imaging. Journal of Cell Science. 134. PMID 33795377 DOI: 10.1242/jcs.254292   
2021 Pekarek BT, Hunt PJ, Belfort BDW, Liu G, Arenkiel BR. Imaging and Quantification of Intact Neuronal Dendrites via CLARITY Tissue Clearing. Journal of Visualized Experiments : Jove. PMID 33970138 DOI: 10.3791/62532   
2021 Wu TC, Wang X, Li L, Bu Y, Umulis DM. Automatic wavelet-based 3D nuclei segmentation and analysis for multicellular embryo quantification. Scientific Reports. 11: 9847. PMID 33972575 DOI: 10.1038/s41598-021-88966-2   
2021 Ha M, Pham D, Xiao C. Accurate feature point detection method exploiting the line structure of the projection pattern for 3D reconstruction. Applied Optics. 60: 2926-2937. PMID 33983185 DOI: 10.1364/AO.414952   
2021 Zhao M, Wang H, Han Y, Wang X, Dai H, Sun X, Zhang J, Pedersen M. SEENS: Nuclei segmentation in Pap smear images with selective edge enhancement Future Generation Computer Systems. 114: 185-194. DOI: 10.1016/J.Future.2020.07.045   
2021 Su J, Han J, Song J. A benchmark bone marrow aspirate smear dataset and a multi-scale cell detection model for the diagnosis of hematological disorders. Computerized Medical Imaging and Graphics : the Official Journal of the Computerized Medical Imaging Society. 90: 101912. PMID 33892388 DOI: 10.1016/j.compmedimag.2021.101912   
2021 Gu D, Liu G, Cao X, Xue Z, Shen D. A consistent deep registration network with group data modeling. Computerized Medical Imaging and Graphics : the Official Journal of the Computerized Medical Imaging Society. 90: 101904. PMID 33964791 DOI: 10.1016/j.compmedimag.2021.101904   
2021 Hartnell D, Hollings A, Ranieri AM, Lamichhane HB, Becker T, Sylvain NJ, Hou H, Pushie MJ, Watkin E, Bambery KR, Tobin MJ, Kelly ME, Massi M, Vongsvivut J, Hackett MJ. Mapping sub-cellular protein aggregates and lipid inclusions using synchrotron ATR-FTIR microspectroscopy. The Analyst. PMID 33881057 DOI: 10.1039/d1an00136a   
2021 Baars MJD, Sinha N, Amini M, Pieterman-Bos A, van Dam S, Ganpat MMP, Laclé MM, Oldenburg B, Vercoulen Y. MATISSE: a method for improved single cell segmentation in imaging mass cytometry. Bmc Biology. 19: 99. PMID 33975602 DOI: 10.1186/s12915-021-01043-y   
2021 Li Z, He X, Teng Q, Li Y, Xiaohong W. Reconstruction of 3D grayscale image for reservoir rock from a single image based on pattern dictionary. Journal of Microscopy. PMID 34002860 DOI: 10.1111/jmi.13019   
2021 Spiers H, Songhurst H, Nightingale L, de Folter J, , Hutchings R, Peddie CJ, Weston A, Strange A, Hindmarsh S, Lintott C, Collinson LM, Jones ML. Deep learning for automatic segmentation of the nuclear envelope in electron microscopy data, trained with volunteer segmentations. Traffic (Copenhagen, Denmark). PMID 33914396 DOI: 10.1111/tra.12789   
2021 Hirway SU, Hassan NT, Sofroniou M, Lemmon CA, Weinberg SH. Immunofluorescence Image Feature Analysis and Phenotype Scoring Pipeline for Distinguishing Epithelial-Mesenchymal Transition. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 1-11. PMID 34011419 DOI: 10.1017/S1431927621000428   
2021 Feng Y, Hafiane A, Laurent H. A deep learning based multiscale approach to segment the areas of interest in whole slide images. Computerized Medical Imaging and Graphics : the Official Journal of the Computerized Medical Imaging Society. 90: 101923. PMID 33894669 DOI: 10.1016/j.compmedimag.2021.101923   
2021 Kushibar K, Salem M, Valverde S, Rovira À, Salvi J, Oliver A, Lladó X. Transductive Transfer Learning for Domain Adaptation in Brain Magnetic Resonance Image Segmentation. Frontiers in Neuroscience. 15: 608808. PMID 33994917 DOI: 10.3389/fnins.2021.608808   
2021 Serša I. Magnetic resonance microscopy of samples with translational symmetry with FOVs smaller than sample size. Scientific Reports. 11: 541. PMID 33436897 DOI: 10.1038/s41598-020-80652-z