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Trygve E. Bakken - Publications

Affiliations: 
Allen Institute for Brain Science, Seattle, WA, United States 
Area:
computational neuroscience, imaging genetics
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41/97 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Emani PS, Liu JJ, Clarke D, Jensen M, Warrell J, Gupta C, Meng R, Lee CY, Xu S, Dursun C, Lou S, Chen Y, Chu Z, Galeev T, Hwang A, ... ... Bakken TE, et al. Single-cell genomics and regulatory networks for 388 human brains. Biorxiv : the Preprint Server For Biology. PMID 38562822 DOI: 10.1101/2024.03.18.585576  0.329
2023 Lee BR, Dalley R, Miller JA, Chartrand T, Close J, Mann R, Mukora A, Ng L, Alfiler L, Baker K, Bertagnolli D, Brouner K, Casper T, Csajbok E, Donadio N, ... ... Bakken T, et al. Signature morphoelectric properties of diverse GABAergic interneurons in the human neocortex. Science (New York, N.Y.). 382: eadf6484. PMID 37824669 DOI: 10.1126/science.adf6484  0.355
2023 Siletti K, Hodge R, Mossi Albiach A, Lee KW, Ding SL, Hu L, Lönnerberg P, Bakken T, Casper T, Clark M, Dee N, Gloe J, Hirschstein D, Shapovalova NV, Keene CD, et al. Transcriptomic diversity of cell types across the adult human brain. Science (New York, N.Y.). 382: eadd7046. PMID 37824663 DOI: 10.1126/science.add7046  0.31
2023 Jorstad NL, Close J, Johansen N, Yanny AM, Barkan ER, Travaglini KJ, Bertagnolli D, Campos J, Casper T, Crichton K, Dee N, Ding SL, Gelfand E, Goldy J, Hirschstein D, ... ... Bakken TE, et al. Transcriptomic cytoarchitecture reveals principles of human neocortex organization. Science (New York, N.Y.). 382: eadf6812. PMID 37824655 DOI: 10.1126/science.adf6812  0.361
2023 Johansen N, Somasundaram S, Travaglini KJ, Yanny AM, Shumyatcher M, Casper T, Cobbs C, Dee N, Ellenbogen R, Ferreira M, Goldy J, Guzman J, Gwinn R, Hirschstein D, Jorstad NL, ... ... Bakken TE, et al. Interindividual variation in human cortical cell type abundance and expression. Science (New York, N.Y.). 382: eadf2359. PMID 37824649 DOI: 10.1126/science.adf2359  0.335
2023 Li YE, Preissl S, Miller M, Johnson ND, Wang Z, Jiao H, Zhu C, Wang Z, Xie Y, Poirion O, Kern C, Pinto-Duarte A, Tian W, Siletti K, Emerson N, ... ... Bakken T, et al. A comparative atlas of single-cell chromatin accessibility in the human brain. Science (New York, N.Y.). 382: eadf7044. PMID 37824643 DOI: 10.1126/science.adf7044  0.342
2023 Jorstad NL, Song JHT, Exposito-Alonso D, Suresh H, Castro-Pacheco N, Krienen FM, Yanny AM, Close J, Gelfand E, Long B, Seeman SC, Travaglini KJ, Basu S, Beaudin M, Bertagnolli D, ... ... Bakken TE, et al. Comparative transcriptomics reveals human-specific cortical features. Science (New York, N.Y.). 382: eade9516. PMID 37824638 DOI: 10.1126/science.ade9516  0.323
2023 Suresh H, Crow M, Jorstad N, Hodge R, Lein E, Dobin A, Bakken T, Gillis J. Comparative single-cell transcriptomic analysis of primate brains highlights human-specific regulatory evolution. Nature Ecology & Evolution. PMID 37667001 DOI: 10.1038/s41559-023-02186-7  0.312
2022 Luo C, Liu H, Xie F, Armand EJ, Siletti K, Bakken TE, Fang R, Doyle WI, Stuart T, Hodge RD, Hu L, Wang BA, Zhang Z, Preissl S, Lee DS, et al. Single nucleus multi-omics identifies human cortical cell regulatory genome diversity. Cell Genomics. 2. PMID 35419551 DOI: 10.1016/j.xgen.2022.100107  0.348
2021 Berg J, Sorensen SA, Ting JT, Miller JA, Chartrand T, Buchin A, Bakken TE, Budzillo A, Dee N, Ding SL, Gouwens NW, Hodge RD, Kalmbach B, Lee C, Lee BR, et al. Human neocortical expansion involves glutamatergic neuron diversification. Nature. 598: 151-158. PMID 34616067 DOI: 10.1038/s41586-021-03813-8  0.336
2021 Bakken TE, Jorstad NL, Hu Q, Lake BB, Tian W, Kalmbach BE, Crow M, Hodge RD, Krienen FM, Sorensen SA, Eggermont J, Yao Z, Aevermann BD, Aldridge AI, Bartlett A, et al. Comparative cellular analysis of motor cortex in human, marmoset and mouse. Nature. 598: 111-119. PMID 34616062 DOI: 10.1038/s41586-021-03465-8  0.329
2021 Bakken TE, van Velthoven CT, Menon V, Hodge RD, Yao Z, Nguyen TN, Graybuck LT, Horwitz GD, Bertagnolli D, Goldy J, Yanny AM, Garren E, Parry S, Casper T, Shehata SI, et al. Single-cell and single-nucleus RNA-seq uncovers shared and distinct axes of variation in dorsal LGN neurons in mice, non-human primates, and humans. Elife. 10. PMID 34473054 DOI: 10.7554/eLife.64875  0.323
2021 Aevermann BD, Zhang Y, Novotny M, Keshk M, Bakken TE, Miller JA, Hodge RD, Lelieveldt B, Lein ES, Scheuermann RH. A machine learning method for the discovery of minimum marker gene combinations for cell-type identification from single-cell RNA sequencing. Genome Research. PMID 34088715 DOI: 10.1101/gr.275569.121  0.325
2020 Huang AY, Li P, Rodin RE, Kim SN, Dou Y, Kenny CJ, Akula SK, Hodge RD, Bakken TE, Miller JA, Lein ES, Park PJ, Lee EA, Walsh CA. Parallel RNA and DNA analysis after deep sequencing (PRDD-seq) reveals cell type-specific lineage patterns in human brain. Proceedings of the National Academy of Sciences of the United States of America. PMID 32522880 DOI: 10.1073/Pnas.2006163117  0.687
2020 Hodge RD, Miller JA, Novotny M, Kalmbach BE, Ting JT, Bakken TE, Aevermann BD, Barkan ER, Berkowitz-Cerasano ML, Cobbs C, Diez-Fuertes F, Ding SL, McCorrison J, Schork NJ, Shehata SI, et al. Transcriptomic evidence that von Economo neurons are regionally specialized extratelencephalic-projecting excitatory neurons. Nature Communications. 11: 1172. PMID 32127543 DOI: 10.1038/s41467-020-14952-3  0.69
2019 Smith SJ, Sümbül U, Graybuck LT, Collman F, Seshamani S, Gala R, Gliko O, Elabbady L, Miller JA, Bakken TE, Rossier J, Yao Z, Lein E, Zeng H, Tasic B, et al. Single-cell transcriptomic evidence for dense intracortical neuropeptide networks. Elife. 8. PMID 31710287 DOI: 10.7554/Elife.47889  0.695
2019 Weed N, Bakken T, Graddis N, Gouwens N, Millman D, Hawrylycz M, Waters J. Identification of genetic markers for cortical areas using a Random Forest classification routine and the Allen Mouse Brain Atlas. Plos One. 14: e0212898. PMID 31483788 DOI: 10.1371/Journal.Pone.0212898  0.406
2019 Hodge RD, Bakken TE, Miller JA, Smith KA, Barkan ER, Graybuck LT, Close JL, Long B, Johansen N, Penn O, Yao Z, Eggermont J, Höllt T, Levi BP, Shehata SI, et al. Conserved cell types with divergent features in human versus mouse cortex. Nature. PMID 31435019 DOI: 10.1038/S41586-019-1506-7  0.693
2019 Molnár Z, Clowry GJ, Šestan N, Alzu'bi A, Bakken T, Hevner RF, Hüppi PS, Kostović I, Rakic P, Anton ES, Edwards D, Garcez P, Hoerder-Suabedissen A, Kriegstein A. New insights into the development of the human cerebral cortex. Journal of Anatomy. PMID 31373394 DOI: 10.1111/Joa.13055  0.461
2019 Coe BP, Stessman HAF, Sulovari A, Geisheker MR, Bakken TE, Lake AM, Dougherty JD, Lein ES, Hormozdiari F, Bernier RA, Eichler EE. Neurodevelopmental disease genes implicated by de novo mutation and copy number variation morbidity. Nature Genetics. 51: 106-116. PMID 30559488 DOI: 10.1038/S41588-018-0288-4  0.643
2019 Smith SJ, Sümbül U, Graybuck LT, Collman F, Seshamani S, Gala R, Gliko O, Elabbady L, Miller JA, Bakken TE, Rossier J, Yao Z, Lein E, Zeng H, Tasic B, et al. Author response: Single-cell transcriptomic evidence for dense intracortical neuropeptide networks Elife. DOI: 10.7554/Elife.47889.Sa2  0.473
2018 Bakken TE, Hodge RD, Miller JA, Yao Z, Nguyen TN, Aevermann B, Barkan E, Bertagnolli D, Casper T, Dee N, Garren E, Goldy J, Graybuck LT, Kroll M, Lasken RS, et al. Single-nucleus and single-cell transcriptomes compared in matched cortical cell types. Plos One. 13: e0209648. PMID 30586455 DOI: 10.1371/Journal.Pone.0209648  0.708
2018 Kalmbach BE, Buchin A, Long B, Close J, Nandi A, Miller JA, Bakken TE, Hodge RD, Chong P, de Frates R, Dai K, Maltzer Z, Nicovich PR, Keene CD, Silbergeld DL, et al. h-Channels Contribute to Divergent Intrinsic Membrane Properties of Supragranular Pyramidal Neurons in Human versus Mouse Cerebral Cortex. Neuron. PMID 30392798 DOI: 10.1016/J.Neuron.2018.10.012  0.361
2018 Tasic B, Yao Z, Graybuck LT, Smith KA, Nguyen TN, Bertagnolli D, Goldy J, Garren E, Economo MN, Viswanathan S, Penn O, Bakken T, Menon V, Miller J, Fong O, et al. Shared and distinct transcriptomic cell types across neocortical areas. Nature. 563: 72-78. PMID 30382198 DOI: 10.1038/S41586-018-0654-5  0.444
2018 Boldog E, Bakken TE, Hodge RD, Novotny M, Aevermann BD, Baka J, Bordé S, Close JL, Diez-Fuertes F, Ding SL, Faragó N, Kocsis ÁK, Kovács B, Maltzer Z, McCorrison JM, et al. Transcriptomic and morphophysiological evidence for a specialized human cortical GABAergic cell type. Nature Neuroscience. PMID 30150662 DOI: 10.1038/S41593-018-0205-2  0.719
2018 Skene NG, Bryois J, Bakken TE, Breen G, Crowley JJ, Gaspar HA, Giusti-Rodriguez P, Hodge RD, Miller JA, Muñoz-Manchado AB, O'Donovan MC, Owen MJ, Pardiñas AF, Ryge J, Walters JTR, et al. Genetic identification of brain cell types underlying schizophrenia. Nature Genetics. PMID 29785013 DOI: 10.1038/s41588-018-0129-5  0.681
2018 Aevermann BD, Novotny M, Bakken T, Miller JA, Diehl AD, Osumi-Sutherland D, Lasken RS, Lein ES, Scheuermann RH. Big data and single cell transcriptomics: implications for ontological representation. Human Molecular Genetics. PMID 29590361 DOI: 10.1093/Hmg/Ddy100  0.649
2017 Bakken T, Cowell L, Aevermann BD, Novotny M, Hodge R, Miller JA, Lee A, Chang I, McCorrison J, Pulendran B, Qian Y, Schork NJ, Lasken RS, Lein ES, Scheuermann RH. Cell type discovery and representation in the era of high-content single cell phenotyping. Bmc Bioinformatics. 18: 559. PMID 29322913 DOI: 10.1186/S12859-017-1977-1  0.674
2017 Close JL, Yao Z, Levi BP, Miller JA, Bakken TE, Menon V, Ting JT, Wall A, Krostag AR, Thomsen ER, Nelson AM, Mich JK, Hodge RD, Shehata SI, Glass IA, et al. Single-Cell Profiling of an In Vitro Model of Human Interneuron Development Reveals Temporal Dynamics of Cell Type Production and Maturation. Neuron. 93: 1035-1048.e5. PMID 28279351 DOI: 10.1016/J.Neuron.2017.02.014  0.46
2016 Aevermann B, McCorrison J, Venepally P, Hodge R, Bakken T, Miller J, Novotny M, Tran DN, Diezfuertes F, Christiansen L, Zhang F, Steemers F, Lasken RS, Lein ED, Schork N, et al. PRODUCTION OF A PRELIMINARY QUALITY CONTROL PIPELINE FOR SINGLE NUCLEI RNA-SEQ AND ITS APPLICATION IN THE ANALYSIS OF CELL TYPE DIVERSITY OF POST-MORTEM HUMAN BRAIN NEOCORTEX. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 22: 564-575. PMID 27897007  0.411
2016 Bakken TE, Miller JA, Ding SL, Sunkin SM, Smith KA, Ng L, Szafer A, Dalley RA, Royall JJ, Lemon T, Shapouri S, Aiona K, Arnold J, Bennett JL, Bertagnolli D, et al. A comprehensive transcriptional map of primate brain development. Nature. PMID 27409810 DOI: 10.1038/Nature18637  0.701
2015 Bakken TE, Miller JA, Luo R, Bernard A, Bennett JL, Lee CK, Bertagnolli D, Parikshak NN, Smith KA, Sunkin SM, Amaral DG, Geschwind DH, Lein ES. Spatiotemporal dynamics of the postnatal developing primate brain transcriptome. Human Molecular Genetics. 24: 4327-39. PMID 25954031 DOI: 10.1093/Hmg/Ddv166  0.675
2014 Pfenning AR, Hara E, Whitney O, Rivas MV, Wang R, Roulhac PL, Howard JT, Wirthlin M, Lovell PV, Ganapathy G, Mouncastle J, Moseley MA, Thompson JW, Soderblom EJ, Iriki A, ... ... Bakken T, et al. Convergent transcriptional specializations in the brains of humans and song-learning birds. Science (New York, N.Y.). 346: 1256846. PMID 25504733 DOI: 10.1126/Science.1256846  0.624
2014 Bernier R, Golzio C, Xiong B, Stessman HA, Coe BP, Penn O, Witherspoon K, Gerdts J, Baker C, Vulto-van Silfhout AT, Schuurs-Hoeijmakers JH, Fichera M, Bosco P, Buono S, Alberti A, ... ... Bakken T, et al. Disruptive CHD8 mutations define a subtype of autism early in development. Cell. 158: 263-76. PMID 24998929 DOI: 10.1016/J.Cell.2014.06.017  0.65
2014 Prüfer K, Racimo F, Patterson N, Jay F, Sankararaman S, Sawyer S, Heinze A, Renaud G, Sudmant PH, de Filippo C, Li H, Mallick S, Dannemann M, Fu Q, Kircher M, ... ... Bakken TE, et al. The complete genome sequence of a Neanderthal from the Altai Mountains. Nature. 505: 43-9. PMID 24352235 DOI: 10.1038/Nature12886  0.615
2012 Bakken TE, Roddey JC, Djurovic S, Akshoomoff N, Amaral DG, Bloss CS, Casey BJ, Chang L, Ernst TM, Gruen JR, Jernigan TL, Kaufmann WE, Kenet T, Kennedy DN, Kuperman JM, et al. Association of common genetic variants in GPCPD1 with scaling of visual cortical surface area in humans. Proceedings of the National Academy of Sciences of the United States of America. 109: 3985-90. PMID 22343285 DOI: 10.1073/Pnas.1105829109  0.552
2012 Bakken TE, Stevens CF. Visual system scaling in teleost fish. The Journal of Comparative Neurology. 520: 142-53. PMID 21681750 DOI: 10.1002/cne.22704  0.473
2011 Bakken TE, Dale AM, Schork NJ. A geographic cline of skull and brain morphology among individuals of European Ancestry. Human Heredity. 72: 35-44. PMID 21849792 DOI: 10.1159/000330168  0.555
2011 Bakken TE, Bloss CS, Roddey JC, Joyner AH, Rimol LM, Djurovic S, Melle I, Sundet K, Agartz I, Andreassen OA, Dale AM, Schork NJ. Association of genetic variants on 15q12 with cortical thickness and cognition in schizophrenia. Archives of General Psychiatry. 68: 781-90. PMID 21810643 DOI: 10.1001/Archgenpsychiatry.2011.81  0.69
2010 Lakatos A, Derbeneva O, Younes D, Keator D, Bakken T, Lvova M, Brandon M, Guffanti G, Reglodi D, Saykin A, Weiner M, Macciardi F, Schork N, Wallace DC, Potkin SG, et al. Association between mitochondrial DNA variations and Alzheimer's disease in the ADNI cohort. Neurobiology of Aging. 31: 1355-63. PMID 20538375 DOI: 10.1016/J.Neurobiolaging.2010.04.031  0.457
2009 Joyner AH, J CR, Bloss CS, Bakken TE, Rimol LM, Melle I, Agartz I, Djurovic S, Topol EJ, Schork NJ, Andreassen OA, Dale AM. A common MECP2 haplotype associates with reduced cortical surface area in humans in two independent populations. Proceedings of the National Academy of Sciences of the United States of America. 106: 15483-8. PMID 19717458 DOI: 10.1073/Pnas.0901866106  0.7
Low-probability matches (unlikely to be authored by this person)
2019 Turner TN, Wilfert AB, Bakken TE, Bernier RA, Pepper MR, Zhang Z, Torene RI, Retterer K, Eichler EE. Sex-Based Analysis of De Novo Variants in Neurodevelopmental Disorders. American Journal of Human Genetics. PMID 31785789 DOI: 10.1016/j.ajhg.2019.11.003  0.288
2023 Zeighami Y, Bakken TE, Nickl-Jockschat T, Peterson Z, Jegga AG, Miller JA, Schulkin J, Evans AC, Lein ES, Hawrylycz M. A comparison of anatomic and cellular transcriptome structures across 40 human brain diseases. Plos Biology. 21: e3002058. PMID 37079537 DOI: 10.1371/journal.pbio.3002058  0.286
2020 Miller JA, Gouwens NW, Tasic B, Collman F, van Velthoven CT, Bakken TE, Hawrylycz MJ, Zeng H, Lein ES, Bernard A. Common cell type nomenclature for the mammalian brain. Elife. 9. PMID 33372656 DOI: 10.7554/eLife.59928  0.277
2022 Wang T, Kim CN, Bakken TE, Gillentine MA, Henning B, Mao Y, Gilissen C, Nowakowski TJ, Eichler EE. Integrated gene analyses of de novo variants from 46,612 trios with autism and developmental disorders. Proceedings of the National Academy of Sciences of the United States of America. 119: e2203491119. PMID 36350923 DOI: 10.1073/pnas.2203491119  0.272
2023 Kim MH, Radaelli C, Thomsen ER, Monet D, Chartrand T, Jorstad NL, Mahoney JT, Taormina MJ, Long B, Baker K, Bakken TE, Campagnola L, Casper T, Clark M, Dee N, et al. Target cell-specific synaptic dynamics of excitatory to inhibitory neuron connections in supragranular layers of human neocortex. Elife. 12. PMID 37249212 DOI: 10.7554/eLife.81863  0.266
2020 Zhang Y, Aevermann BD, Bakken TE, Miller JA, Hodge RD, Lein ES, Scheuermann RH. FR-Match: robust matching of cell type clusters from single cell RNA sequencing data using the Friedman-Rafsky non-parametric test. Briefings in Bioinformatics. PMID 33249453 DOI: 10.1093/bib/bbaa339  0.258
2021 Wilfert AB, Turner TN, Murali SC, Hsieh P, Sulovari A, Wang T, Coe BP, Guo H, Hoekzema K, Bakken TE, Winterkorn LH, Evani US, Byrska-Bishop M, Earl RK, Bernier RA, et al. Recent ultra-rare inherited variants implicate new autism candidate risk genes. Nature Genetics. PMID 34312540 DOI: 10.1038/s41588-021-00899-8  0.256
2022 Buchanan J, Elabbady L, Collman F, Jorstad NL, Bakken TE, Ott C, Glatzer J, Bleckert AA, Bodor AL, Brittain D, Bumbarger DJ, Mahalingam G, Seshamani S, Schneider-Mizell C, Takeno MM, et al. Oligodendrocyte precursor cells ingest axons in the mouse neocortex. Proceedings of the National Academy of Sciences of the United States of America. 119: e2202580119. PMID 36417438 DOI: 10.1073/pnas.2202580119  0.245
2023 Mich JK, Sunil S, Johansen N, Martinez RA, Leytze M, Gore BB, Mahoney JT, Ben-Simon Y, Bishaw Y, Brouner K, Campos J, Canfield R, Casper T, Dee N, Egdorf T, ... ... Bakken TE, et al. Enhancer-AAVs allow genetic access to oligodendrocytes and diverse populations of astrocytes across species. Biorxiv : the Preprint Server For Biology. PMID 37790503 DOI: 10.1101/2023.09.20.558718  0.242
2024 Mao Y, Harvey WT, Porubsky D, Munson KM, Hoekzema K, Lewis AP, Audano PA, Rozanski A, Yang X, Zhang S, Yoo D, Gordon DS, Fair T, Wei X, Logsdon GA, ... ... Bakken TE, et al. Structurally divergent and recurrently mutated regions of primate genomes. Cell. PMID 38428424 DOI: 10.1016/j.cell.2024.01.052  0.236
2021 Kalmbach BE, Hodge RD, Jorstad NL, Owen S, de Frates R, Yanny AM, Dalley R, Mallory M, Graybuck LT, Radaelli C, Keene CD, Gwinn RP, Silbergeld DL, Cobbs C, Ojemann JG, ... ... Bakken TE, et al. Signature morpho-electric, transcriptomic, and dendritic properties of human layer 5 neocortical pyramidal neurons. Neuron. 109: 2914-2927.e5. PMID 34534454 DOI: 10.1016/j.neuron.2021.08.030  0.23
2017 Close JL, Yao Z, Levi BP, Miller JA, Bakken TE, Menon V, Ting JT, Wall A, Krostag AR, Thomsen ER, Nelson AM, Mich JK, Hodge RD, Shehata SI, Glass IA, et al. Single-Cell Profiling of an In Vitro Model of Human Interneuron Development Reveals Temporal Dynamics of Cell Type Production and Maturation. Neuron. 96: 949. PMID 29144976 DOI: 10.1016/j.neuron.2017.10.024  0.215
2022 Berg J, Sorensen SA, Ting JT, Miller JA, Chartrand T, Buchin A, Bakken TE, Budzillo A, Dee N, Ding SL, Gouwens NW, Hodge RD, Kalmbach B, Lee C, Lee BR, et al. Author Correction: Human neocortical expansion involves glutamatergic neuron diversification. Nature. PMID 34992294 DOI: 10.1038/s41586-021-04322-4  0.205
2023 Chartrand T, Dalley R, Close J, Goriounova NA, Lee BR, Mann R, Miller JA, Molnar G, Mukora A, Alfiler L, Baker K, Bakken TE, Berg J, Bertagnolli D, Braun T, et al. Morphoelectric and transcriptomic divergence of the layer 1 interneuron repertoire in human versus mouse neocortex. Science (New York, N.Y.). 382: eadf0805. PMID 37824667 DOI: 10.1126/science.adf0805  0.183
2022 Bakken TE, Jorstad NL, Hu Q, Lake BB, Tian W, Kalmbach BE, Crow M, Hodge RD, Krienen FM, Sorensen SA, Eggermont J, Yao Z, Aevermann BD, Aldridge AI, Bartlett A, et al. Author Correction: Comparative cellular analysis of motor cortex in human, marmoset and mouse. Nature. PMID 35319013 DOI: 10.1038/s41586-022-04562-y  0.175
2012 He M, Zhang W, Bakken T, Schutten M, Toth Z, Jung JU, Gill P, Cannon M, Gao SJ. Cancer angiogenesis induced by Kaposi sarcoma-associated herpesvirus is mediated by EZH2. Cancer Research. 72: 3582-92. PMID 22593192 DOI: 10.1158/0008-5472.Can-11-2876  0.159
2007 Kang SW, Thayananuphat A, Bakken T, El Halawani ME. Dopamine-melatonin neurons in the avian hypothalamus controlling seasonal reproduction. Neuroscience. 150: 223-33. PMID 17935892 DOI: 10.1016/j.neuroscience.2007.08.031  0.159
2021 Bhattacharya A, Jha V, Singhal K, Fatima M, Singh D, Chaturvedi G, Dholakia D, Kutum R, Pandey R, Bakken TE, Seth P, Pillai B, Mukerji M. Multiple Alu Exonization in 3'UTR of a Primate-Specific Isoform of CYP20A1 Creates a Potential miRNA Sponge. Genome Biology and Evolution. 13. PMID 33434274 DOI: 10.1093/gbe/evaa233  0.158
2006 Al-Zailaie KA, Kang SW, Youngren OM, Thayananuphat A, Bakken T, Chaiseha Y, Millam JR, Proudman JA, El Halawani ME. Identification of dopamine, gonadotrophin-releasing hormone-I, and vasoactive intestinal peptide neurones activated by electrical stimulation to the medial preoptic area of the turkey hypothalamus: a potential reproductive neuroendocrine circuit. Journal of Neuroendocrinology. 18: 514-25. PMID 16774500 DOI: 10.1111/J.1365-2826.2006.01443.X  0.147
2010 Bakken T, He M, Cannon ML. The phosphatase Shp2 is required for signaling by the Kaposi's sarcoma-associated herpesvirus viral GPCR in primary endothelial cells. Virology. 397: 379-88. PMID 20004456 DOI: 10.1016/j.virol.2009.11.030  0.131
2007 Thayananuphat A, Kang SW, Bakken T, Millam JR, El Halawani ME. Rhythmic dependent light induction of gonadotrophin-releasing hormone-I expression and activation of dopaminergic neurones within the premammillary nucleus of the turkey hypothalamus. Journal of Neuroendocrinology. 19: 399-406. PMID 17388816 DOI: 10.1111/j.1365-2826.2007.01545.x  0.128
2011 Thayananuphat A, Youngren OM, Kang SW, Bakken T, Kosonsiriluk S, Chaiseha Y, El Halawani ME. Dopamine and mesotocin neurotransmission during the transition from incubation to brooding in the turkey. Hormones and Behavior. 60: 327-35. PMID 21741977 DOI: 10.1016/j.yhbeh.2011.06.009  0.127
2012 He M, Bakken T, Kassimova A, Boshoff C, Philpott N, Cannon ML. Focal adhesion kinase is required for KSHV vGPCR signaling. Molecular Carcinogenesis. 51: 339-51. PMID 21538577 DOI: 10.1002/mc.20790  0.111
2019 Capa M, Nygren A, Parapar J, Bakken T, Meißner K, Moreira J. Systematic re-structure and new species of Sphaerodoridae (Annelida) after morphological revision and molecular phylogenetic analyses of the North East Atlantic fauna. Zookeys. 845: 1-97. PMID 31148919 DOI: 10.3897/zookeys.845.32428  0.108
2016 Capa M, Aguado MT, Bakken T. Phylogenetic hypothesis of Sphaerodoridae Malmgren, 1867 (Annelida) and its position within Phyllodocida. Cladistics : the International Journal of the Willi Hennig Society. 32: 335-350. PMID 34740300 DOI: 10.1111/cla.12134  0.106
2007 Cheeran MC, Hu S, Palmquist JM, Bakken T, Gekker G, Lokensgard JR. Dysregulated interferon-gamma responses during lethal cytomegalovirus brain infection of IL-10-deficient mice. Virus Research. 130: 96-102. PMID 17624463 DOI: 10.1016/J.Virusres.2007.05.022  0.101
2014 Bakken T, Kang SW, Kosonsiriluk S, Kuwayama T, Chaiseha Y, El Halawani ME. Differential roles of hypothalamic serotonin receptor subtypes in the regulation of prolactin secretion in the turkey hen. Acta Histochemica. 116: 131-7. PMID 23886495 DOI: 10.1016/j.acthis.2013.06.002  0.093
2020 Grosse M, Bakken T, Nygren A, Kongsrud JA, Capa M. Species delimitation analyses of NE Atlantic Chaetozone (Annelida, Cirratulidae) reveals hidden diversity among a common and abundant marine annelid. Molecular Phylogenetics and Evolution. 149: 106852. PMID 32417496 DOI: 10.1016/j.ympev.2020.106852  0.092
2007 Thayananuphat A, Kang SW, Bakken T, Millam JR, El Halawani ME. Rhythm-dependent light induction of the c-fos gene in the turkey hypothalamus. Journal of Neuroendocrinology. 19: 407-17. PMID 17388817 DOI: 10.1111/J.1365-2826.2007.01544.X  0.089
2016 Capa M, Osborn KJ, Bakken T. Sphaerodoridae (Annelida) of the deep Northwestern Atlantic, including remarkable new species of Euritmia and Sphaerephesia. Zookeys. 1-32. PMID 27667938 DOI: 10.3897/Zookeys.615.9530  0.082
2010 Ravi K, Bharucha AE, Camilleri M, Rhoten D, Bakken T, Zinsmeister AR. Phenotypic variation of colonic motor functions in chronic constipation. Gastroenterology. 138: 89-97. PMID 19660461 DOI: 10.1053/j.gastro.2009.07.057  0.078
2023 Wilson RS, Glasby CJ, Bakken T. The Nereididae (Annelida) - diagnoses, descriptions, and a key to the genera. Zookeys. 1182: 35-134. PMID 37868122 DOI: 10.3897/zookeys.1182.104258  0.074
2017 Korshunova T, Martynov A, Bakken T, Evertsen J, Fletcher K, Mudianta IW, Saito H, Lundin K, Michael Schrödl, Picton B. Polyphyly of the traditional family Flabellinidae affects a major group of Nudibranchia: aeolidacean taxonomic reassessment with descriptions of several new families, genera, and species (Mollusca, Gastropoda). Zookeys. 1-139. PMID 29391848 DOI: 10.3897/zookeys.717.21885  0.074
2018 Bolotov IN, Aksenova OV, Bakken T, Glasby CJ, Gofarov MY, Kondakov AV, Konopleva ES, Lopes-Lima M, Lyubas AA, Wang Y, Bychkov AY, Sokolova AM, Tanmuangpak K, Tumpeesuwan S, Vikhrev IV, et al. Discovery of a silicate rock-boring organism and macrobioerosion in fresh water. Nature Communications. 9: 2882. PMID 30038289 DOI: 10.1038/s41467-018-05133-4  0.074
2024 Eilertsen MH, Kongsrud JA, Tandberg AHS, Alvestad T, Budaeva N, Martell L, Ramalho SP, Falkenhaug T, Huys R, Oug E, Bakken T, Høisæter T, Rauch C, Carvalho FC, Savchenko AS, et al. Diversity, habitat endemicity and trophic ecology of the fauna of Loki's Castle vent field on the Arctic Mid-Ocean Ridge. Scientific Reports. 14: 103. PMID 38167527 DOI: 10.1038/s41598-023-46434-z  0.072
2014 Kyrø C, Olsen A, Bueno-de-Mesquita HB, Skeie G, Loft S, Ã…man P, Leenders M, Dik VK, Siersema PD, Pischon T, Christensen J, Overvad K, Boutron-Ruault MC, Fagherazzi G, Cottet V, ... ... Bakken T, et al. Plasma alkylresorcinol concentrations, biomarkers of whole-grain wheat and rye intake, in the European Prospective Investigation into Cancer and Nutrition (EPIC) cohort. The British Journal of Nutrition. 111: 1881-90. PMID 24521535 DOI: 10.1017/S0007114513004388  0.072
2022 Speed JDM, Evankow AM, Petersen TK, Ranke PS, Nilsen NH, Turner G, Aagaard K, Bakken T, Davidsen JG, Dunshea G, Finstad AG, Hassel K, Husby M, Hårsaker K, Koksvik JI, et al. A regionally coherent ecological fingerprint of climate change, evidenced from natural history collections. Ecology and Evolution. 12: e9471. PMID 36340816 DOI: 10.1002/ece3.9471  0.071
2014 Bakken T, Oug E, Kongsrud JA. Occurrence and distribution of Pseudoscalibregma and Scalibregma (Annelida, Scalibregmatidae) in the deep Nordic Seas, with the description of Scalibregma hanseni n. sp. Zootaxa. 3753: 101-17. PMID 24872283  0.069
2018 Nygren A, Parapar J, Pons J, Meißner K, Bakken T, Kongsrud JA, Oug E, Gaeva D, Sikorski A, Johansen RA, Hutchings PA, Lavesque N, Capa M. A mega-cryptic species complex hidden among one of the most common annelids in the North East Atlantic. Plos One. 13: e0198356. PMID 29924805 DOI: 10.1371/Journal.Pone.0198356  0.065
2018 Villalobos-Guerrero TF, Bakken T. Revision of the Alitta virens species complex (Annelida: Nereididae) from the North Pacific Ocean. Zootaxa. 4483: 201-257. PMID 30313786 DOI: 10.11646/zootaxa.4483.2.1  0.065
2018 Capa M, Bakken T, Meißner K, Nygren A. Three, two, one! Revision of the long-bodied sphaerodorids (Sphaerodoridae, Annelida) and synonymization of , and . Peerj. 6: e5783. PMID 30386698 DOI: 10.7717/peerj.5783  0.062
2011 Philpott N, Bakken T, Pennell C, Chen L, Wu J, Cannon M. The Kaposi's sarcoma-associated herpesvirus G protein-coupled receptor contains an immunoreceptor tyrosine-based inhibitory motif that activates Shp2. Journal of Virology. 85: 1140-4. PMID 21047965 DOI: 10.1128/Jvi.01362-10  0.061
2021 Grosse M, Capa M, Bakken T. Describing the hidden species diversity of (Annelida, Cirratulidae) in the Norwegian Sea using morphological and molecular diagnostics. Zookeys. 1039: 139-176. PMID 34113206 DOI: 10.3897/zookeys.1039.61098  0.06
2017 Frafjord K, Bakken T, Kubicek L, Rønning AH, Syvertsen PO. Records of ocean sunfish Mola mola along the Norwegian coast spanning two centuries, 1801-2015. Journal of Fish Biology. PMID 28901024 DOI: 10.1111/jfb.13456  0.06
2018 Bakken T, Braaten T, Olsen A, Hjartåker A, Lund E, Skeie G. Milk and risk of colorectal, colon and rectal cancer in the Norwegian Women and Cancer (NOWAC) Cohort Study. The British Journal of Nutrition. 119: 1274-1285. PMID 29770759 DOI: 10.1017/S0007114518000752  0.057
2015 Capa M, Bakken T. Revision of the Australian Sphaerodoridae (Annelida) including the description of four new species. Zootaxa. 4000: 227-67. PMID 26623612  0.049
2020 Ceriello H, Lopes CSS, Reimer JD, Bakken T, Fukuda MV, Cunha CM, Stampar SN. Knock knock, who's there?: marine invertebrates in tubes of Ceriantharia (Cnidaria: Anthozoa). Biodiversity Data Journal. 8: e47019. PMID 31992946 DOI: 10.3897/BDJ.8.e47019  0.045
2014 Kyrø C, Olsen A, Landberg R, Skeie G, Loft S, Ã…man P, Leenders M, Dik VK, Siersema PD, Pischon T, Christensen J, Overvad K, Boutron-Ruault MC, Fagherazzi G, Cottet V, ... ... Bakken T, et al. Plasma alkylresorcinols, biomarkers of whole-grain wheat and rye intake, and incidence of colorectal cancer. Journal of the National Cancer Institute. 106: djt352. PMID 24317181 DOI: 10.1093/Jnci/Djt352  0.045
2016 Bakken T, Braaten T, Olsen A, Kyrø C, Lund E, Skeie G. Consumption of Whole-Grain Bread and Risk of Colorectal Cancer among Norwegian Women (the NOWAC Study). Nutrients. 8. PMID 26771634 DOI: 10.3390/nu8010040  0.044
2017 Korshunova T, Martynov A, Bakken T, Evertsen J, Fletcher K, Mudianta IW, Saito H, Lundin K, Schrödl M, Picton B. Corrigenda: Polyphyly of the traditional family Flabellinidae affects a major group of Nudibranchia: aeolidacean taxonomic reassessment with descriptions of several new families, genera, and species (Mollusca, Gastropoda). https://doi.org/10.3897/zookeys.717.21885. Zookeys. 139-141. PMID 29393932 DOI: 10.3897/zookeys.725.23022  0.042
2015 Bakken T, Braaten T, Olsen A, Lund E, Skeie G. Characterization of Norwegian women eating wholegrain bread. Public Health Nutrition. 1-10. PMID 25711149 DOI: 10.1017/S1368980015000245  0.026
2019 Ekrem T, Stur E, Bakken T, Martin MD, Adamowicz SJ. Abstracts from the 8th International Barcode of Life Conference in Trondheim, Norway. Genome. 62: iii-iv. PMID 31192704 DOI: 10.1139/gen-2019-0097  0.024
2003 Bakken T, Straand J. [Improved medicine lists with multi-dose packaging?]. Tidsskrift For Den Norske Lã¦Geforening : Tidsskrift For Praktisk Medicin, Ny Rã¦Kke. 123: 3595-7. PMID 14691514  0.014
2010 Bakken T, Naesgaard JM, Ignjatovic D. [An 83-year old man with acute pain in the right iliac fossa]. Tidsskrift For Den Norske Lã¦Geforening : Tidsskrift For Praktisk Medicin, Ny Rã¦Kke. 130: 2127-9. PMID 21052114 DOI: 10.4045/tidsskr.09.1402  0.01
2003 Acevedo KC, Bakken T. Women adjusting to prison: disciplinary behavior and the characteristics of adjustment. Journal of Health & Social Policy. 17: 37-60. PMID 17824590  0.01
2000 Bakken T. Constitutional and social equality: legacies and limits of law, politics and culture. Indian Journal of Gender Studies. 7: 71-82. PMID 12322598  0.01
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