| Year |
Citation |
Score |
| 2024 |
Haynes VR, Zhou Y, Crook SM. Discovering optimal features for neuron-type identification from extracellular recordings. Frontiers in Neuroinformatics. 18: 1303993. PMID 38371496 DOI: 10.3389/fninf.2024.1303993 |
0.723 |
|
| 2023 |
Birgiolas J, Haynes V, Gleeson P, Gerkin RC, Dietrich SW, Crook S. NeuroML-DB: Sharing and characterizing data-driven neuroscience models described in NeuroML. Plos Computational Biology. 19: e1010941. PMID 36867658 DOI: 10.1371/journal.pcbi.1010941 |
0.684 |
|
| 2022 |
Eriksson O, Bhalla US, Blackwell KT, Crook SM, Keller D, Kramer A, Linne ML, Saudargienė A, Wade RC, Hellgren Kotaleski J. Combining hypothesis- and data-driven neuroscience modeling in FAIR workflows. Elife. 11. PMID 35792600 DOI: 10.7554/eLife.69013 |
0.666 |
|
| 2019 |
Gleeson P, Cantarelli M, Marin B, Quintana A, Earnshaw M, Sadeh S, Piasini E, Birgiolas J, Cannon RC, Cayco-Gajic NA, Crook S, Davison AP, Dura-Bernal S, Ecker A, Hines ML, et al. Open Source Brain: A Collaborative Resource for Visualizing, Analyzing, Simulating, and Developing Standardized Models of Neurons and Circuits. Neuron. PMID 31201122 DOI: 10.1016/J.Neuron.2019.05.019 |
0.786 |
|
| 2018 |
Neal ML, König M, Nickerson D, Misirli G, Kalbasi R, Dräger A, Atalag K, Chelliah V, Cooling MT, Cook DL, Crook S, de Alba M, Friedman SH, Garny A, Gennari JH, et al. Harmonizing semantic annotations for computational models in biology. Briefings in Bioinformatics. PMID 30462164 DOI: 10.1093/Bib/Bby087 |
0.668 |
|
| 2018 |
Gerkin RC, Jarvis RJ, Crook SM. Towards systematic, data-driven validation of a collaborative, multi-scale model of . Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 373. PMID 30201844 DOI: 10.1098/rstb.2017.0381 |
0.76 |
|
| 2017 |
Birgiolas J, Jernigan CM, Gerkin RC, Smith BH, Crook SM. SwarmSight: Real-time Tracking of Insect Antenna Movements and Proboscis Extension Reflex Using a Common Preparation and Conventional Hardware. Journal of Visualized Experiments : Jove. PMID 29364251 DOI: 10.3791/56803 |
0.725 |
|
| 2016 |
Samavat M, Luli D, Crook S. Neuronal Network Models for Sensory Discrimination. Conference Record. Asilomar Conference On Signals, Systems & Computers. 2016: 1066-1073. PMID 29881246 DOI: 10.1109/ACSSC.2016.7869533 |
0.683 |
|
| 2016 |
Sharpee TO, Destexhe A, Kawato M, Sekulić V, Skinner FK, Wójcik DK, Chintaluri C, Cserpán D, Somogyvári Z, Kim JK, Kilpatrick ZP, Bennett MR, Josić K, Elices I, Arroyo D, ... ... Crook SM, et al. 25th Annual Computational Neuroscience Meeting: CNS-2016 Bmc Neuroscience. 17: 54. PMID 27534393 DOI: 10.1186/S12868-016-0283-6 |
0.718 |
|
| 2016 |
Birgiolas J, Jernigan CM, Smith BH, Crook SM. SwarmSight: Measuring the temporal progression of animal group activity levels from natural-scene and laboratory videos. Behavior Research Methods. PMID 27130170 DOI: 10.3758/S13428-016-0732-2 |
0.746 |
|
| 2015 |
Berger SD, Crook SM. Modeling the Influence of Ion Channels on Neuron Dynamics in Drosophila. Frontiers in Computational Neuroscience. 9: 139. PMID 26635592 DOI: 10.3389/fncom.2015.00139 |
0.607 |
|
| 2014 |
Cannon RC, Gleeson P, Crook S, Ganapathy G, Marin B, Piasini E, Silver RA. LEMS: a language for expressing complex biological models in concise and hierarchical form and its use in underpinning NeuroML 2. Frontiers in Neuroinformatics. 8: 79. PMID 25309419 DOI: 10.3389/Fninf.2014.00079 |
0.413 |
|
| 2014 |
Vella M, Cannon RC, Crook S, Davison AP, Ganapathy G, Robinson HP, Silver RA, Gleeson P. libNeuroML and PyLEMS: using Python to combine procedural and declarative modeling approaches in computational neuroscience. Frontiers in Neuroinformatics. 8: 38. PMID 24795618 DOI: 10.3389/fninf.2014.00038 |
0.408 |
|
| 2014 |
Crook SM, Dietrich S. Model exchange with the NeuroML model database Bmc Neuroscience. 15. DOI: 10.1186/1471-2202-15-S1-P171 |
0.444 |
|
| 2013 |
Herrera-Valdez MA, McKiernan EC, Berger SD, Ryglewski S, Duch C, Crook S. Relating ion channel expression, bifurcation structure, and diverse firing patterns in a model of an identified motor neuron. Journal of Computational Neuroscience. 34: 211-29. PMID 22878689 DOI: 10.1007/S10827-012-0416-6 |
0.636 |
|
| 2013 |
Berger SD, Baer SM, Crook SM. A continuum approach to model neurites/dendrites with emerging subtrees Bmc Neuroscience. 14. DOI: 10.1186/1471-2202-14-S1-P73 |
0.662 |
|
| 2012 |
Crook SM, Bednar JA, Berger S, Cannon R, Davison AP, Djurfeldt M, Eppler J, Kriener B, Furber S, Graham B, Plesser HE, Schwabe L, Smith L, Steuber V, van Albada S. Creating, documenting and sharing network models. Network (Bristol, England). 23: 131-49. PMID 22994683 DOI: 10.3109/0954898X.2012.722743 |
0.662 |
|
| 2012 |
Cannon R, Gleeson P, Crook S, Silver RA. A declarative model specification system allowing NeuroML to be extended with user-defined component types Bmc Neuroscience. 13. DOI: 10.1186/1471-2202-13-S1-P42 |
0.454 |
|
| 2012 |
Gleeson P, Piasini E, Crook S, Cannon R, Steuber V, Jaeger D, Solinas S, D’Angelo E, Silver RA. The Open Source Brain Initiative: enabling collaborative modelling in computational neuroscience Bmc Neuroscience. 13. DOI: 10.1186/1471-2202-13-S1-O7 |
0.676 |
|
| 2011 |
Gleeson P, Crook S, Silver A, Cannon R. Development of NeuroML version 2.0: greater extensibility, support for abstract neuronal models and interaction with Systems Biology languages Bmc Neuroscience. 12. DOI: 10.1186/1471-2202-12-S1-P29 |
0.523 |
|
| 2011 |
Smith A, Cruz-Aponte M, McKiernan EC, Crook S, Herrera-Valdez M. Differential contribution of A-type potassium currents in shaping neuronal responses to synaptic input Bmc Neuroscience. 12. DOI: 10.1186/1471-2202-12-S1-P147 |
0.41 |
|
| 2010 |
Gleeson P, Crook S, Cannon RC, Hines ML, Billings GO, Farinella M, Morse TM, Davison AP, Ray S, Bhalla US, Barnes SR, Dimitrova YD, Silver RA. NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail. Plos Computational Biology. 6: e1000815. PMID 20585541 DOI: 10.1371/Journal.Pcbi.1000815 |
0.73 |
|
| 2010 |
Herrera-Valdez MA, Berger SD, Duch C, Crook S. Differential contribution of voltage-dependent potassium currents to neuronal excitability Bmc Neuroscience. 11. DOI: 10.1186/1471-2202-11-S1-P159 |
0.648 |
|
| 2009 |
Berger SD, Herrera-Valdez MA, Duch C, Crook S. Passive current transfer in wildtype and genetically modified Drosophila motoneuron dendrites Bmc Neuroscience. 10. DOI: 10.1186/1471-2202-10-S1-P346 |
0.59 |
|
| 2009 |
Herrera-Valdez MA, Berger SD, Duch C, Crook S. Predicting changes in neuronal excitability type in response to genetic manipulations of K+-channels Bmc Neuroscience. 10. DOI: 10.1186/1471-2202-10-S1-P301 |
0.622 |
|
| 2009 |
Crook S, Silver RA, Gleeson P. Describing and exchanging models of neurons and neuronal networks with NeuroML Bmc Neuroscience. 10: 1-2. DOI: 10.1186/1471-2202-10-S1-L1 |
0.511 |
|
| 2009 |
Baer SM, Crook S, Dur-e-Ahmad M, Jackiewicz Z. Numerical solution of calcium-mediated dendritic branch model Journal of Computational and Applied Mathematics. 229: 416-424. DOI: 10.1016/J.Cam.2008.04.011 |
0.311 |
|
| 2007 |
Crook SM, Dur-E-Ahmad M, Baer SM. A model of activity-dependent changes in dendritic spine density and spine structure. Mathematical Biosciences and Engineering : Mbe. 4: 617-31. PMID 17924715 DOI: 10.3934/Mbe.2007.4.617 |
0.312 |
|
| 2007 |
Kurian M, Crook S. Two-compartment models of spasticity in spinal motor neurons following spinal cord injury Bmc Neuroscience. 8. DOI: 10.1186/1471-2202-8-S2-P101 |
0.343 |
|
| 2007 |
Gleeson P, Crook S, Steuber V, Silver RA. Using NeuroML and neuroConstruct to build neuronal network models for multiple simulators Bmc Neuroscience. 8. DOI: 10.1186/1471-2202-8-S2-P1 |
0.512 |
|
| 1998 |
Crook SM, Ermentrout GB, Bower JM. Dendritic and synaptic effects in systems of coupled cortical oscillators. Journal of Computational Neuroscience. 5: 315-29. PMID 9663554 DOI: 10.1023/A:1008839112707 |
0.493 |
|
| 1998 |
Crook SM, Ermentrout GB, Bower JM. Spike frequency adaptation affects the synchronization properties of networks of cortical oscillations. Neural Computation. 10: 837-54. PMID 9573408 DOI: 10.1162/089976698300017511 |
0.496 |
|
| 1997 |
Crook SM, Ermentrout GB, Vanier MC, Bower JM. The role of axonal delay in the synchronization of networks of coupled cortical oscillators. Journal of Computational Neuroscience. 4: 161-72. PMID 9154522 DOI: 10.1023/A:1008843412952 |
0.725 |
|
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