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Robin Patrick Smith - Publications

Affiliations: 
University of Miami, Coral Gables, FL 
Area:
Neuroscience, Bioinformatics
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20 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Eclov RJ, Kim MJ, Chhibber A, Smith RP, Ahituv N, Kroetz DL. ABCG2 regulatory single-nucleotide polymorphisms alter in-vivo enhancer activity and expression. Pharmacogenetics and Genomics. PMID 28930109 DOI: 10.1097/Fpc.0000000000000312  0.31
2016 Luizon MR, Eckalbar WL, Wang Y, Jones SL, Smith RP, Laurance M, Lin L, Gallins PJ, Etheridge AS, Wright F, Zhou Y, Molony C, Innocenti F, Yee SW, Giacomini KM, et al. Genomic Characterization of Metformin Hepatic Response. Plos Genetics. 12: e1006449. PMID 27902686 DOI: 10.1371/Journal.Pgen.1006449  0.378
2016 Eclov RJ, Kim MJ, Smith RP, Liang X, Ahituv N, Kroetz DL. In Vivo Hepatic Enhancer Elements in the Human ABCG2 Locus. Drug Metabolism and Disposition: the Biological Fate of Chemicals. PMID 27856528 DOI: 10.1124/Dmd.116.072033  0.352
2014 Birnbaum RY, Patwardhan RP, Kim MJ, Findlay GM, Martin B, Zhao J, Bell RJ, Smith RP, Ku AA, Shendure J, Ahituv N. Systematic dissection of coding exons at single nucleotide resolution supports an additional role in cell-specific transcriptional regulation. Plos Genetics. 10: e1004592. PMID 25340400 DOI: 10.1371/Journal.Pgen.1004592  0.305
2014 Smith RP, Eckalbar WL, Morrissey KM, Luizon MR, Hoffmann TJ, Sun X, Jones SL, Force Aldred S, Ramamoorthy A, Desta Z, Liu Y, Skaar TC, Trinklein ND, Giacomini KM, Ahituv N. Genome-wide discovery of drug-dependent human liver regulatory elements. Plos Genetics. 10: e1004648. PMID 25275310 DOI: 10.1371/Journal.Pgen.1004648  0.35
2014 VanderMeer JE, Smith RP, Jones SL, Ahituv N. Genome-wide identification of signaling center enhancers in the developing limb. Development (Cambridge, England). 141: 4194-8. PMID 25273087 DOI: 10.1242/Dev.110965  0.403
2013 Taher L, Smith RP, Kim MJ, Ahituv N, Ovcharenko I. Sequence signatures extracted from proximal promoters can be used to predict distal enhancers. Genome Biology. 14: R117. PMID 24156763 DOI: 10.1186/Gb-2013-14-10-R117  0.356
2013 Smith RP, Taher L, Patwardhan RP, Kim MJ, Inoue F, Shendure J, Ovcharenko I, Ahituv N. Massively parallel decoding of mammalian regulatory sequences supports a flexible organizational model. Nature Genetics. 45: 1021-8. PMID 23892608 DOI: 10.1038/Ng.2713  0.351
2013 Smith RP, Riesenfeld SJ, Holloway AK, Li Q, Murphy KK, Feliciano NM, Orecchia L, Oksenberg N, Pollard KS, Ahituv N. A compact, in vivo screen of all 6-mers reveals drivers of tissue-specific expression and guides synthetic regulatory element design. Genome Biology. 14: R72. PMID 23867016 DOI: 10.1186/Gb-2013-14-7-R72  0.378
2012 Buchser WJ, Smith RP, Pardinas JR, Haddox CL, Hutson T, Moon L, Hoffman SR, Bixby JL, Lemmon VP. Peripheral nervous system genes expressed in central neurons induce growth on inhibitory substrates. Plos One. 7: e38101. PMID 22701605 DOI: 10.1371/Journal.Pone.0038101  0.689
2012 Smith RP, Lam ET, Markova S, Yee SW, Ahituv N. Pharmacogene regulatory elements: from discovery to applications. Genome Medicine. 4: 45. PMID 22630332 DOI: 10.1186/Gm344  0.316
2012 Johnstone AL, Reierson GW, Smith RP, Goldberg JL, Lemmon VP, Bixby JL. A chemical genetic approach identifies piperazine antipsychotics as promoters of CNS neurite growth on inhibitory substrates. Molecular and Cellular Neurosciences. 50: 125-35. PMID 22561309 DOI: 10.1016/J.Mcn.2012.04.008  0.63
2012 Patwardhan RP, Hiatt JB, Witten DM, Kim MJ, Smith RP, May D, Lee C, Andrie JM, Lee SI, Cooper GM, Ahituv N, Pennacchio LA, Shendure J. Massively parallel functional dissection of mammalian enhancers in vivo. Nature Biotechnology. 30: 265-70. PMID 22371081 DOI: 10.1038/Nbt.2136  0.363
2011 Visser U, Abeyruwan S, Vempati U, Smith RP, Lemmon V, Schürer SC. BioAssay Ontology (BAO): a semantic description of bioassays and high-throughput screening results. Bmc Bioinformatics. 12: 257. PMID 21702939 DOI: 10.1186/1471-2105-12-257  0.504
2011 Schürer SC, Vempati U, Smith R, Southern M, Lemmon V. BioAssay ontology annotations facilitate cross-analysis of diverse high-throughput screening data sets. Journal of Biomolecular Screening. 16: 415-26. PMID 21471461 DOI: 10.1177/1087057111400191  0.546
2011 Smith RP, Lerch-Haner JK, Pardinas JR, Buchser WJ, Bixby JL, Lemmon VP. Transcriptional profiling of intrinsic PNS factors in the postnatal mouse. Molecular and Cellular Neurosciences. 46: 32-44. PMID 20696251 DOI: 10.1016/j.mcn.2010.07.015  0.682
2010 Blackmore MG, Moore DL, Smith RP, Goldberg JL, Bixby JL, Lemmon VP. High content screening of cortical neurons identifies novel regulators of axon growth. Molecular and Cellular Neurosciences. 44: 43-54. PMID 20159039 DOI: 10.1016/J.Mcn.2010.02.002  0.692
2010 Tapanes-Castillo A, Weaver EJ, Smith RP, Kamei Y, Caspary T, Hamilton-Nelson KL, Slifer SH, Martin ER, Bixby JL, Lemmon VP. A modifier locus on chromosome 5 contributes to L1 cell adhesion molecule X-linked hydrocephalus in mice. Neurogenetics. 11: 53-71. PMID 19565280 DOI: 10.1007/S10048-009-0203-3  0.566
2008 Smith RP, Buchser WJ, Lemmon MB, Pardinas JR, Bixby JL, Lemmon VP. EST Express: PHP/MySQL based automated annotation of ESTs from expression libraries. Bmc Bioinformatics. 9: 186. PMID 18402700 DOI: 10.1186/1471-2105-9-186  0.651
2005 Newpher TM, Smith RP, Lemmon V, Lemmon SK. In vivo dynamics of clathrin and its adaptor-dependent recruitment to the actin-based endocytic machinery in yeast. Developmental Cell. 9: 87-98. PMID 15992543 DOI: 10.1016/J.Devcel.2005.04.014  0.487
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